Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136100.1 | Wheat | cytosol | 97.0 | 94.18 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 82.36 | 93.78 |
| HORVU4Hr1G080460.5 | Barley | cytosol | 79.54 | 77.49 |
| OQU84114 | Sorghum | mitochondrion | 41.09 | 48.64 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 49.56 | 44.67 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 46.03 | 44.16 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 43.92 | 42.64 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 50.44 | 42.43 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 48.5 | 41.6 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 52.91 | 40.65 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 52.2 | 40.27 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 29.28 | 40.19 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 31.39 | 39.64 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 50.44 | 35.44 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 39.15 | 33.79 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 43.21 | 30.06 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 41.09 | 30.03 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 36.51 | 29.4 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 34.92 | 27.39 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 34.04 | 26.99 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 33.51 | 26.35 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 33.51 | 26.1 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 33.33 | 24.97 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 22.93 | 23.55 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 22.75 | 23.29 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 22.05 | 23.28 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 22.05 | 21.93 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 19.22 | 17.27 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G141200.1 | EnsemblPlantsGene:TraesCS4B01G141200 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4B:-:185872421..185874124
Molecular Weight (calculated)
64074.9 Da
IEP (calculated)
6.180
GRAVY (calculated)
-0.402
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDHLALPNI ARILMEEDDD IDEDNPALLK AQRPFAQILS SSMHASTLTA DQGGALASDM HSLSSGILKF KGVDEVRSLL LLANGEFSTD IFSTAFLKGM
101: EEAKKFLPTN SELTTTGEQD QPKEKSSRGR KDWSNEVEAD VSRTDRLVEA GACEVFDFNQ MCSSMDNETG NSNKKGRKSK ARVIDLHTLL IHCAKAVMDD
201: RRRAGELLKE IQQHASPTGD ATQRLAYWFA EGLEARLTGT GSQVYGTLTA KGTSAVAHSE AYQEFISACC FRNVSFLFAN RAIFNAAVGR SRLHIVDYGF
301: RYGFQWSELL RWLAARDGGP PEVRITHIDL PQPGFHPEKH MKEIDSRLTD IARDLGVSFK YRAILAQWQT VSIEDLDLDL EPDEVLAVND LYNFRTLMDE
401: SVVIGSPNPR DTVLGNISKM KPDVFVQSTV NGSYGTFFLS RFREALFFYS ALFDMLDATM PRENKLRLAL ERNIFGWVVL NAIAYEGKDR VERCETYKHW
501: QVRNQRAGLR QLPLDRETVK MARDMVKNKY HKDFLIDEDH HWLLQGWKGR ILLAHSTWEA DGASSHC
101: EEAKKFLPTN SELTTTGEQD QPKEKSSRGR KDWSNEVEAD VSRTDRLVEA GACEVFDFNQ MCSSMDNETG NSNKKGRKSK ARVIDLHTLL IHCAKAVMDD
201: RRRAGELLKE IQQHASPTGD ATQRLAYWFA EGLEARLTGT GSQVYGTLTA KGTSAVAHSE AYQEFISACC FRNVSFLFAN RAIFNAAVGR SRLHIVDYGF
301: RYGFQWSELL RWLAARDGGP PEVRITHIDL PQPGFHPEKH MKEIDSRLTD IARDLGVSFK YRAILAQWQT VSIEDLDLDL EPDEVLAVND LYNFRTLMDE
401: SVVIGSPNPR DTVLGNISKM KPDVFVQSTV NGSYGTFFLS RFREALFFYS ALFDMLDATM PRENKLRLAL ERNIFGWVVL NAIAYEGKDR VERCETYKHW
501: QVRNQRAGLR QLPLDRETVK MARDMVKNKY HKDFLIDEDH HWLLQGWKGR ILLAHSTWEA DGASSHC
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.