Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176200.1 | Wheat | peroxisome | 94.67 | 95.26 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 90.33 | 95.05 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 89.47 | 91.05 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 57.74 | 63.14 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 57.5 | 63.13 |
| OQU84105 | Sorghum | cytosol | 56.26 | 62.19 |
| Zm00001d048604_P001 | Maize | cytosol | 56.26 | 59.35 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 48.45 | 58.01 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 46.22 | 56.43 |
| KXG36217 | Sorghum | cytosol | 56.75 | 55.18 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 42.75 | 54.85 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 36.8 | 50.86 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 35.44 | 50.44 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 36.18 | 49.41 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 23.05 | 45.04 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 24.78 | 44.54 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 32.96 | 40.49 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 35.07 | 36.47 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 35.32 | 34.97 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 29.37 | 33.66 |
| Zm00001d048603_P001 | Maize | cytosol | 57.74 | 32.75 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 28.75 | 32.09 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 26.89 | 29.81 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 27.88 | 29.72 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 26.39 | 29.54 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 25.77 | 29.09 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 17.47 | 25.45 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 15.37 | 23.09 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 15.74 | 23.01 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 16.11 | 22.81 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 14.87 | 19.02 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G141500.1 | EnsemblPlantsGene:TraesCS4B01G141500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4B:-:186606957..186609380
Molecular Weight (calculated)
88564.4 Da
IEP (calculated)
6.104
GRAVY (calculated)
-0.396
Length
807 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPDEFLR AGDFLADAEP FSPSLFLDLP PTPSPPRAPF APASDDLDFI SRMLMEEDID DKFFYQYPDH PAILSAQHRF AQIISDSNTT PSTDDSANTT
101: VASSTFSSDS ATARSTSSCS DSATNTAKST SSSHSATNTA NSTSCSSSPG GFGPANPTWP YERIDLSQPL QSRPYIGLGF PVDDANNLLF SGVCTPTAGY
201: FGHAPALSKG NNDHFVAPAG QNGRGTGIQS FAAFSNSSAA KTLSNNGTEK AAKPATPPVC RGGPGTPASA FFSGQADGDM DMLNMAFRKG MEEANKFLPT
301: NNTLDAISNR PALRDFTCDQ LKKEEVDRLR MLMFSNGRGR KNRHGVEDLE AEAGRRSKLM MPEQEESGVG EMVEEIMLHG HDIIMKGIED LHIAMGTEAE
401: KNHRKGTGKA ARGRRGASEV DLRTMLIHCA QAVATGDHRG SNELLRQIKQ HSSPKGDATQ RLAYCFAEGL EARLAGTGSH VYQSLVAKST SVGEFLRAYK
501: LYMAASSFRK VNFIFVGKII MDAMVGKSRL HIVDYNVEYG FQWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG
601: IPAKLETVHA EDLNIDPDEV LIVTSQCGFS NLMDESVIMD RQDIPSPRDM VLSNIRNMRP DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP
701: RDNDDRLLIE RDIFGPCALN VIACEGADRV DRPETYKQWQ VRGHRAGLRQ VPLSSAVVKL VKDKVKSLYH KDFLIDVDNR WLLQGWKGRV LYAMSTWVAG
801: DHDNSKF
101: VASSTFSSDS ATARSTSSCS DSATNTAKST SSSHSATNTA NSTSCSSSPG GFGPANPTWP YERIDLSQPL QSRPYIGLGF PVDDANNLLF SGVCTPTAGY
201: FGHAPALSKG NNDHFVAPAG QNGRGTGIQS FAAFSNSSAA KTLSNNGTEK AAKPATPPVC RGGPGTPASA FFSGQADGDM DMLNMAFRKG MEEANKFLPT
301: NNTLDAISNR PALRDFTCDQ LKKEEVDRLR MLMFSNGRGR KNRHGVEDLE AEAGRRSKLM MPEQEESGVG EMVEEIMLHG HDIIMKGIED LHIAMGTEAE
401: KNHRKGTGKA ARGRRGASEV DLRTMLIHCA QAVATGDHRG SNELLRQIKQ HSSPKGDATQ RLAYCFAEGL EARLAGTGSH VYQSLVAKST SVGEFLRAYK
501: LYMAASSFRK VNFIFVGKII MDAMVGKSRL HIVDYNVEYG FQWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG
601: IPAKLETVHA EDLNIDPDEV LIVTSQCGFS NLMDESVIMD RQDIPSPRDM VLSNIRNMRP DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP
701: RDNDDRLLIE RDIFGPCALN VIACEGADRV DRPETYKQWQ VRGHRAGLRQ VPLSSAVVKL VKDKVKSLYH KDFLIDVDNR WLLQGWKGRV LYAMSTWVAG
801: DHDNSKF
001: MLRGGEQFGQ PANEILVRSM FSDAESVLQF KRGLEEASKF LPNTDQWIFN LEPEMERVVP VKVEEGWSAI SKTRKNHHER EEEEDDLEEA RRRSKQFAVN
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
101: EEDGKLTEMF DKVLLLDGEC DPQIIEDGEN GSSKALVKKG RAKKKSRAVD FRTLLTLCAQ SVSAGDKITA DDLLRQIRKQ CSPVGDASQR LAHFFANALE
201: ARLEGSTGTM IQSYYDSISS KKRTAAQILK SYSVFLSASP FMTLIYFFSN KMILDAAKDA SVLHIVDFGI LYGFQWPMFI QHLSKSNPGL RKLRITGIEI
301: PQHGLRPTER IQDTGRRLTE YCKRFGVPFE YNAIASKNWE TIKMEEFKIR PNEVLAVNAV LRFKNLRDVI PGEEDCPRDG FLKLIRDMNP NVFLSSTVNG
401: SFNAPFFTTR FKEALFHYSA LFDLFGATLS KENPERIHFE GEFYGREVMN VIACEGVDRV ERPETYKQWQ VRMIRAGFKQ KPVEAELVQL FREKMKKWGY
501: HKDFVLDEDS NWFLQGWKGR ILFSSSCWVP S
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.