Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G336200.1 | Wheat | cytosol | 61.42 | 62.16 |
| OQU84120 | Sorghum | nucleus | 52.45 | 48.9 |
| Zm00001d003553_P001 | Maize | cytosol | 49.07 | 47.78 |
| KXG26392 | Sorghum | cytosol | 50.25 | 46.85 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 44.16 | 46.03 |
| KXG29232 | Sorghum | cytosol | 52.62 | 45.74 |
| Zm00001d048600_P001 | Maize | nucleus | 49.41 | 45.27 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 48.56 | 42.58 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 45.18 | 42.45 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 31.81 | 41.87 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 46.7 | 41.75 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 50.42 | 40.54 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 49.92 | 39.97 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 27.75 | 39.71 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 49.41 | 36.18 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 37.23 | 33.49 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 42.81 | 32.6 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 41.12 | 29.82 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.52 | 28.29 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 33.84 | 27.97 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 32.99 | 27.7 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 33.84 | 27.66 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 33.67 | 27.34 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.32 | 25.23 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 22.67 | 24.19 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 22.84 | 23.68 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 21.15 | 23.28 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 20.98 | 22.46 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 19.63 | 18.38 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G140800.1 | EnsemblPlantsGene:TraesCS4B01G140800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4B:-:185218287..185223019
Molecular Weight (calculated)
66722.0 Da
IEP (calculated)
7.287
GRAVY (calculated)
-0.287
Length
591 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDIIDKFF YQHPEHPTLL QAEQPFAEIL SASVITTAGA HGSSALIPSQ GNNTGIMASG FLSSEVHSPP LILNGRVTAE EPSSGVTMGD LSSMAFFKGM
101: EEANSFLPTV NVMVDARGRK KRSGMDGETE ACMGRSSKQI AVRVLAHNDS AEEDTALELD LLILNGYNMH SNETMKARER GDEAEQQCIS TKAPRGRRGA
201: RLVVVDDLET LLIRCAEAVA TNDQRSACEL LWRVKRHSSP TGDATQRLAH YFAEGLEARL AGRGSQLYRS LMVKRTPVVE VLKAYKLFMS ACCFMKVCFL
301: FSNKTIYNAV MGRHKLHIVH YGVNDGFQWP DLLRCLAERE GGPPKVRITS ITSLWPGFRP AEQTHDTGQR LRRCAKQFGV PFEFRVIEVK AEDVRVEDLN
401: INPDEVLVVN SLIHFRSLMD ESVVIDRLNP RDIVLNTIRK MKPAVFVHAI VNASYNTTFF VTRFRQVLHN FAAHFDVMEA TVPRDNDERL LVERDIIARC
501: AMNIIACEGT DRVERPQNYR EWQARNQRAG LRQLALDPDL VQFLKDMVKK QYHKHFVINE DHQWLLQGWK GRVLYAISTW VSDDASSTQV T
101: EEANSFLPTV NVMVDARGRK KRSGMDGETE ACMGRSSKQI AVRVLAHNDS AEEDTALELD LLILNGYNMH SNETMKARER GDEAEQQCIS TKAPRGRRGA
201: RLVVVDDLET LLIRCAEAVA TNDQRSACEL LWRVKRHSSP TGDATQRLAH YFAEGLEARL AGRGSQLYRS LMVKRTPVVE VLKAYKLFMS ACCFMKVCFL
301: FSNKTIYNAV MGRHKLHIVH YGVNDGFQWP DLLRCLAERE GGPPKVRITS ITSLWPGFRP AEQTHDTGQR LRRCAKQFGV PFEFRVIEVK AEDVRVEDLN
401: INPDEVLVVN SLIHFRSLMD ESVVIDRLNP RDIVLNTIRK MKPAVFVHAI VNASYNTTFF VTRFRQVLHN FAAHFDVMEA TVPRDNDERL LVERDIIARC
501: AMNIIACEGT DRVERPQNYR EWQARNQRAG LRQLALDPDL VQFLKDMVKK QYHKHFVINE DHQWLLQGWK GRVLYAISTW VSDDASSTQV T
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.