Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G174100.1 | Wheat | cytosol | 91.84 | 96.15 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 92.79 | 92.41 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 92.52 | 90.91 |
| Os11t0705200-01 | Rice | cytosol | 59.32 | 63.01 |
| OQU84105 | Sorghum | cytosol | 57.96 | 58.36 |
| Zm00001d048604_P001 | Maize | cytosol | 60.0 | 57.65 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 63.13 | 57.5 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 47.48 | 55.48 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 50.34 | 54.9 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 49.12 | 54.61 |
| KXG36217 | Sorghum | cytosol | 60.82 | 53.86 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 40.27 | 52.2 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 40.54 | 50.42 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 39.73 | 50.0 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.84 | 47.22 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.39 | 46.97 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 35.51 | 39.73 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 38.23 | 36.21 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 39.59 | 35.71 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 32.38 | 33.81 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 31.56 | 32.09 |
| Zm00001d048603_P001 | Maize | cytosol | 61.9 | 31.97 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 29.39 | 29.67 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 28.98 | 29.54 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 28.71 | 29.51 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 30.2 | 29.33 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 20.27 | 26.9 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 19.32 | 25.72 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 18.37 | 25.14 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 18.5 | 23.86 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 17.28 | 20.13 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G077800.1 | EnsemblPlantsGene:TraesCS7B01G077800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr7B:-:87172091..87174465
Molecular Weight (calculated)
80761.9 Da
IEP (calculated)
4.670
GRAVY (calculated)
-0.462
Length
735 amino acids
Sequence
(BLAST)
(BLAST)
001: MDATPEEFEA LSPSLFLDLP PTPPPAGDVD LDFISRMLME EDIDDKFFYQ YPDQPAILDA QRPYEQIISD TTTTSSGSPN GTTSSDGNAA TSSSEETNNS
101: SWPYDPLELS QLLRSPPCLD DMLFGGLVPD SPADEDARDS FLADAPAAGF QQSPAQFKGA ADWAGAFSGQ NGGSPGTQSS AVLNGPAEEK EAETKPAMFS
201: AGDGGQDGLL SAFFSNGGDM DMLNSAFLKG MEEANKFLPT NNALLEAIPD KERGFTVKKK EVVANGTPTS GNGRGRKYRH DEDDDLEAET ARSSKLMTPD
301: NEETGAREMF DEIMLEEYEK CIQGIEELRL VMDSEAKKKS GKAARAKKSE AVDLRTMLVH CAQAVAAGDS RGATELLRQI KQHSGPTGDA TQRLAHCFAE
401: GLEARLAGTG SQVYQSLVAK RTSVVEFLKA YKLFMAACCF KKANFGFANK TILNAVAGKR RLHIVDFGVQ YGLQWPGLMR WLAQRDGGPP EVRITGIDLP
501: QPGFRPARQV EETGRRLSSC ARELGVPFKF HGVAAKLDTV RGEDLRIDPD EVLIVHCQCG LSNLMDDSVA VTTDGGPSPR DVVLRNIRDM RPDVFVEGVA
601: NGGYGAPFFV TRFREAMFFY SAHFDMLDAT LPRDNDERLL IERDIIGRGA LNVIACEGAD RVERPETYRQ WQARNRRAGL RQLPLDPEVV GMVREKVREH
701: YHKDFLVDVD HQWLLQGWKG RVLYALSTWV AHDDS
101: SWPYDPLELS QLLRSPPCLD DMLFGGLVPD SPADEDARDS FLADAPAAGF QQSPAQFKGA ADWAGAFSGQ NGGSPGTQSS AVLNGPAEEK EAETKPAMFS
201: AGDGGQDGLL SAFFSNGGDM DMLNSAFLKG MEEANKFLPT NNALLEAIPD KERGFTVKKK EVVANGTPTS GNGRGRKYRH DEDDDLEAET ARSSKLMTPD
301: NEETGAREMF DEIMLEEYEK CIQGIEELRL VMDSEAKKKS GKAARAKKSE AVDLRTMLVH CAQAVAAGDS RGATELLRQI KQHSGPTGDA TQRLAHCFAE
401: GLEARLAGTG SQVYQSLVAK RTSVVEFLKA YKLFMAACCF KKANFGFANK TILNAVAGKR RLHIVDFGVQ YGLQWPGLMR WLAQRDGGPP EVRITGIDLP
501: QPGFRPARQV EETGRRLSSC ARELGVPFKF HGVAAKLDTV RGEDLRIDPD EVLIVHCQCG LSNLMDDSVA VTTDGGPSPR DVVLRNIRDM RPDVFVEGVA
601: NGGYGAPFFV TRFREAMFFY SAHFDMLDAT LPRDNDERLL IERDIIGRGA LNVIACEGAD RVERPETYRQ WQARNRRAGL RQLPLDPEVV GMVREKVREH
701: YHKDFLVDVD HQWLLQGWKG RVLYALSTWV AHDDS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.