Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 96.44 | 96.09 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 92.52 | 95.44 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 90.31 | 93.05 |
| Os01t0842200-01 | Rice | cytosol | 73.86 | 73.41 |
| EES01740 | Sorghum | cytosol | 72.64 | 73.36 |
| Zm00001d042907_P001 | Maize | cytosol | 71.29 | 71.82 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 24.17 | 47.7 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 35.71 | 44.29 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 30.06 | 43.21 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 40.98 | 43.04 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 32.39 | 41.97 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 29.82 | 41.12 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 29.45 | 41.1 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 33.25 | 41.0 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 32.88 | 39.76 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 35.71 | 39.59 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 35.09 | 38.75 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 32.76 | 37.93 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 33.01 | 37.21 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 34.97 | 35.32 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.92 | 35.24 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 30.8 | 34.81 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 30.31 | 33.93 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 31.17 | 33.55 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 17.3 | 25.45 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 16.56 | 23.68 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 15.34 | 23.28 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 14.36 | 21.2 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 13.25 | 17.12 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G392600.1 | EnsemblPlantsGene:TraesCS3B01G392600 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF131 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr3B:+:618148584..618151263
Molecular Weight (calculated)
89744.5 Da
IEP (calculated)
5.874
GRAVY (calculated)
-0.311
Length
815 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCGGGGGGV SMVMDAALHD WCGPLPGGSK LPIYPQIPDG FTAEELESLL LFPPDGADAG AYLNAAAAPP LLPSPPASAD SASSPPPRDA LVSSPAAAAA
101: AGQAQPDDSE VFSDIVLGYI NRMLMAEDID EKFDHYPAHQ ALLAAEKPFL EILADQPPCS GGSTVESPDG SSVTTNSFNS LATCNCAAPS GGLRAMQAPP
201: ALEFPTAEFL QPPQFYQDLS PESCVVEAGG AWPYDAMEFN PLPDALLSQS SSFASSNGSS VAFSEGFEPW LSTAGAVPDA GLSDFVLQSQ QAAQFSRGFE
301: EGSRFLPQES KLVIDVDSLP SVWVKEDKKV VEVKREKADA EVAIHRGKKH FYGDDLDADE VRCCKHSAPV VDADHLVREM MDKVLLCNGE TCSRGVKELR
401: EALQHDVAAH SGGAHGKGSG HGKGRGKKQV KQPKKEVVDL ETLLIHCAQS VSIDDRRSAT DLLKQIRQHA SANGDGDQRL AHCFANGLEA RLAGNGSQIY
501: KLHTISRFAC ADILKAYQLY LAACPFKKIS HYFANQTIMN AVEKAKKVHI VDFGVYYGFQ WPCLIQRLSK RPGGPPELRI TAIDTPQPGF RPAERIEEIG
601: RYLSDYAQTF KVPFKYHGIA SQFEAVRVED LHIEKDEILI VNSMFRFKTL MDESVVAESP RNMVLNTIRK MKPHVFIHGV TNGSYNAPFF VSRFREALFQ
701: FSAHFDMLEA NIPRDNEERL LIESTIFSRE AINVISCEGM ERMERPETYK QWQVRNQRAR FKQLPLDQEI MKRAREKVKC YHKNFIIDED NGWLLQGWKG
801: RILYALSTWK ANPQF
101: AGQAQPDDSE VFSDIVLGYI NRMLMAEDID EKFDHYPAHQ ALLAAEKPFL EILADQPPCS GGSTVESPDG SSVTTNSFNS LATCNCAAPS GGLRAMQAPP
201: ALEFPTAEFL QPPQFYQDLS PESCVVEAGG AWPYDAMEFN PLPDALLSQS SSFASSNGSS VAFSEGFEPW LSTAGAVPDA GLSDFVLQSQ QAAQFSRGFE
301: EGSRFLPQES KLVIDVDSLP SVWVKEDKKV VEVKREKADA EVAIHRGKKH FYGDDLDADE VRCCKHSAPV VDADHLVREM MDKVLLCNGE TCSRGVKELR
401: EALQHDVAAH SGGAHGKGSG HGKGRGKKQV KQPKKEVVDL ETLLIHCAQS VSIDDRRSAT DLLKQIRQHA SANGDGDQRL AHCFANGLEA RLAGNGSQIY
501: KLHTISRFAC ADILKAYQLY LAACPFKKIS HYFANQTIMN AVEKAKKVHI VDFGVYYGFQ WPCLIQRLSK RPGGPPELRI TAIDTPQPGF RPAERIEEIG
601: RYLSDYAQTF KVPFKYHGIA SQFEAVRVED LHIEKDEILI VNSMFRFKTL MDESVVAESP RNMVLNTIRK MKPHVFIHGV TNGSYNAPFF VSRFREALFQ
701: FSAHFDMLEA NIPRDNEERL LIESTIFSRE AINVISCEGM ERMERPETYK QWQVRNQRAR FKQLPLDQEI MKRAREKVKC YHKNFIIDED NGWLLQGWKG
801: RILYALSTWK ANPQF
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.