Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G392600.1 | Wheat | cytosol | 96.09 | 96.44 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 92.67 | 95.95 |
| HORVU3Hr1G086210.1 | Barley | cytosol, nucleus, plasma membrane | 89.73 | 92.79 |
| EES01740 | Sorghum | cytosol | 72.62 | 73.61 |
| Os01t0842200-01 | Rice | cytosol | 72.86 | 72.68 |
| Zm00001d042907_P001 | Maize | cytosol | 71.76 | 72.56 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 34.35 | 45.62 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.33 | 43.99 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 40.46 | 42.76 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 30.44 | 42.64 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 33.86 | 41.1 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 30.32 | 40.79 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 32.15 | 40.52 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 31.42 | 40.28 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 34.47 | 40.17 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 35.45 | 39.78 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 31.3 | 39.63 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 33.62 | 38.62 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 31.66 | 38.37 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 32.4 | 37.8 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 32.76 | 37.59 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 32.89 | 37.1 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 30.93 | 36.67 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 34.23 | 36.51 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 32.03 | 35.94 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 30.81 | 34.9 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 28.61 | 34.62 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 17.73 | 26.13 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 16.38 | 24.36 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 16.5 | 23.68 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 15.28 | 23.32 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 14.67 | 21.74 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 13.45 | 17.54 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G354100.1 | EnsemblPlantsGene:TraesCS3D01G354100 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF131 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr3D:+:464800537..464802993
Molecular Weight (calculated)
89761.4 Da
IEP (calculated)
6.056
GRAVY (calculated)
-0.324
Length
818 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCGGGVSMV MDAALHDWCG PLPGGSKLPI YPQIPDGFTA EELESLLLFP SDGADAGAYL NAAAAPALLP PPPASAGSAS PPPPRDASAH SPSAAAAAAG
101: QAHPQPDDSE VFSDIVLGYI NRMLMAEDID EKFDHYPAHP ALLAAEKPFL EILADQPPCS GGSTVESPDG SSVTTSSFNS HGSCNCAAPS GGGLGAMQAP
201: PALEFPSAEF LQPPQFYQDL SPESCVVEAG GAWPYDAMEF NPLPDALLSQ SSSFASSNGS SVAFSEGFEP WLSTAAAVPS DAGLSDLVLQ SQQAVQFSRG
301: FEEGSRFLPQ ESKLVIDIDS LPSVRVKEDK KVVEVKREKA DSEVAIHRGK KHFYGDDLDA DEVRCCKHSA PVVDADHLVR EMMDKVLLCN GETCSRGVKE
401: LREALQHDVA AHSGGAHGKG SGHGKGRGKK QVKQPKKEVV DLETLLIHCA QSVSIDDRRS ATDLLKQIRQ HASANGDGDQ RLAHCFANGL EARLAGNGSQ
501: IYKLHTISRF ACADILKAYQ LYLAACPFKK ISHYFANQTI MNAVEKAKKV HIVDFGVYYG FQWPCLIQRL SKRPGGPPEL RITAIDTPQP GFRPAERIEE
601: IGRYLSDYAQ TFKVPFKYHG IASQFEAVQV EDLHIEKDEI LIVNSMFRFK TLMDESVVAE SPRNMVLNTI RKMKPHVFIH GVTNGSYNAP FFVSRFREAL
701: FQFSAHFDML EANIPRDNEE RLLIESTIFS REAINVISCE GMERMERPET YKQWQVRNQR AGFKQLPLDP EIMKRAREKV KCYHKNFIID EDNRWLLQGW
801: KGRILYALST WKANPQSS
101: QAHPQPDDSE VFSDIVLGYI NRMLMAEDID EKFDHYPAHP ALLAAEKPFL EILADQPPCS GGSTVESPDG SSVTTSSFNS HGSCNCAAPS GGGLGAMQAP
201: PALEFPSAEF LQPPQFYQDL SPESCVVEAG GAWPYDAMEF NPLPDALLSQ SSSFASSNGS SVAFSEGFEP WLSTAAAVPS DAGLSDLVLQ SQQAVQFSRG
301: FEEGSRFLPQ ESKLVIDIDS LPSVRVKEDK KVVEVKREKA DSEVAIHRGK KHFYGDDLDA DEVRCCKHSA PVVDADHLVR EMMDKVLLCN GETCSRGVKE
401: LREALQHDVA AHSGGAHGKG SGHGKGRGKK QVKQPKKEVV DLETLLIHCA QSVSIDDRRS ATDLLKQIRQ HASANGDGDQ RLAHCFANGL EARLAGNGSQ
501: IYKLHTISRF ACADILKAYQ LYLAACPFKK ISHYFANQTI MNAVEKAKKV HIVDFGVYYG FQWPCLIQRL SKRPGGPPEL RITAIDTPQP GFRPAERIEE
601: IGRYLSDYAQ TFKVPFKYHG IASQFEAVQV EDLHIEKDEI LIVNSMFRFK TLMDESVVAE SPRNMVLNTI RKMKPHVFIH GVTNGSYNAP FFVSRFREAL
701: FQFSAHFDML EANIPRDNEE RLLIESTIFS REAINVISCE GMERMERPET YKQWQVRNQR AGFKQLPLDP EIMKRAREKV KCYHKNFIID EDNRWLLQGW
801: KGRILYALST WKANPQSS
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.