Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G081000.1 | Wheat | cytosol | 90.24 | 83.79 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 82.25 | 77.01 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 75.44 | 73.91 |
| OQU91407 | Sorghum | nucleus | 52.81 | 52.04 |
| KXG38064 | Sorghum | nucleus | 55.33 | 51.94 |
| EER91260 | Sorghum | nucleus | 55.03 | 51.59 |
| Zm00001d033166_P001 | Maize | nucleus | 55.03 | 50.82 |
| OQU91406 | Sorghum | nucleus | 55.47 | 50.13 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 26.92 | 41.18 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 18.2 | 38.8 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 18.05 | 38.49 |
| Solyc04g011630.1.1 | Tomato | cytosol | 9.62 | 38.24 |
| PGSC0003DMT400049420 | Potato | cytosol | 35.65 | 36.3 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 37.87 | 35.9 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 38.46 | 35.86 |
| PGSC0003DMT400005480 | Potato | cytosol | 25.74 | 35.73 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 36.83 | 35.52 |
| CDY71578 | Canola | nucleus, plastid | 27.37 | 35.51 |
| KRH10240 | Soybean | cytosol | 31.07 | 34.65 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 30.47 | 34.33 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 36.98 | 34.29 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 35.35 | 33.71 |
| Bra015584.1-P | Field mustard | cytosol | 21.6 | 33.49 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 30.92 | 33.17 |
| Bra028391.1-P | Field mustard | nucleus | 30.18 | 32.9 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 36.39 | 32.89 |
| Solyc10g086530.1.1 | Tomato | cytosol | 36.98 | 32.85 |
| CDY47877 | Canola | nucleus | 30.03 | 32.85 |
| CDX79750 | Canola | peroxisome | 32.69 | 32.79 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 32.54 | 32.69 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 32.54 | 32.69 |
| CDY33040 | Canola | nucleus | 28.85 | 32.66 |
| CDY39530 | Canola | cytosol | 29.88 | 32.63 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 37.28 | 32.56 |
| KRH24780 | Soybean | cytosol | 31.66 | 32.42 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 18.79 | 32.4 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 31.36 | 32.27 |
| KRH29773 | Soybean | cytosol | 29.29 | 32.25 |
| AT5G59450.1 | Thale cress | nucleus | 28.99 | 32.13 |
| KRH23095 | Soybean | cytosol | 31.21 | 32.12 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 31.21 | 32.07 |
| PGSC0003DMT400016258 | Potato | cytosol | 34.32 | 31.87 |
| Solyc05g053090.1.1 | Tomato | cytosol | 34.91 | 31.76 |
| AT3G46600.1 | Thale cress | cytosol | 27.37 | 31.73 |
| CDY47878 | Canola | nucleus | 32.4 | 31.69 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 28.85 | 31.66 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 35.5 | 31.54 |
| Solyc09g010920.1.1 | Tomato | cytosol | 35.5 | 31.54 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 28.55 | 31.54 |
| KRH65839 | Soybean | cytosol, plastid | 34.02 | 31.51 |
| KRH29774 | Soybean | cytosol | 29.29 | 31.38 |
| PGSC0003DMT400069949 | Potato | cytosol | 34.62 | 31.33 |
| Bra028390.1-P | Field mustard | cytosol | 32.69 | 31.3 |
| KRH23094 | Soybean | cytosol | 25.59 | 31.28 |
| CDX77228 | Canola | cytosol | 31.07 | 31.25 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 29.73 | 31.11 |
| AT2G29060.1 | Thale cress | cytosol | 31.8 | 30.98 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 33.28 | 30.95 |
| AT2G37650.1 | Thale cress | cytosol | 32.84 | 30.92 |
| CDX68388 | Canola | cytosol | 18.93 | 30.92 |
| KRG99969 | Soybean | cytosol | 33.58 | 30.8 |
| KRH49113 | Soybean | cytosol | 33.43 | 30.79 |
| Bra033813.1-P | Field mustard | nucleus | 26.48 | 30.76 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 31.21 | 30.67 |
| CDX86475 | Canola | nucleus | 32.1 | 30.56 |
| KRH29775 | Soybean | nucleus | 30.33 | 30.46 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 31.66 | 30.4 |
| CDY06266 | Canola | cytosol | 28.4 | 30.38 |
| Bra035653.1-P | Field mustard | cytosol | 32.4 | 30.33 |
| CDY31749 | Canola | cytosol | 32.54 | 30.3 |
| CDX82987 | Canola | nucleus | 26.92 | 30.28 |
| KRH24773 | Soybean | nucleus | 30.77 | 30.28 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 34.02 | 30.26 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 32.1 | 30.18 |
| Solyc01g100200.2.1 | Tomato | nucleus | 29.59 | 30.03 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 28.25 | 29.94 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 25.74 | 29.79 |
| KRH24778 | Soybean | nucleus | 29.73 | 29.73 |
| Solyc06g082530.1.1 | Tomato | cytosol | 28.7 | 29.71 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 33.14 | 29.71 |
| KRH24775 | Soybean | cytosol | 29.88 | 29.71 |
| CDY15616 | Canola | nucleus | 31.36 | 29.65 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 28.25 | 29.57 |
| Solyc06g076280.1.1 | Tomato | cytosol | 32.69 | 29.55 |
| Bra030688.1-P | Field mustard | nucleus | 32.4 | 29.48 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 26.48 | 29.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.7 | 29.44 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 28.25 | 29.43 |
| KRH29771 | Soybean | cytosol | 29.44 | 29.26 |
| PGSC0003DMT400077972 | Potato | cytosol | 32.54 | 29.26 |
| PGSC0003DMT400078286 | Potato | nucleus | 28.85 | 29.24 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 32.1 | 29.21 |
| KRH23089 | Soybean | cytosol | 27.66 | 29.04 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 28.85 | 28.93 |
| KRH29779 | Soybean | cytosol | 31.66 | 28.84 |
| KRH10243 | Soybean | nucleus | 28.25 | 28.72 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 34.62 | 28.61 |
| Bra031581.1-P | Field mustard | cytosol | 28.25 | 28.59 |
| CDY06265 | Canola | cytosol | 28.85 | 28.26 |
| CDX68389 | Canola | cytosol | 3.55 | 28.24 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 29.73 | 28.23 |
| KRH23090 | Soybean | vacuole | 25.89 | 28.18 |
| Bra031580.1-P | Field mustard | cytosol | 28.7 | 28.12 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 33.14 | 28.11 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 27.81 | 27.85 |
| AT1G07530.1 | Thale cress | cytosol | 31.66 | 27.83 |
| AT1G07520.3 | Thale cress | cytosol | 28.55 | 27.73 |
| CDY09912 | Canola | cytosol | 28.4 | 27.43 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 28.11 | 27.07 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 29.14 | 27.02 |
| CDY09911 | Canola | nucleus | 21.45 | 24.83 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 27.51 | 24.25 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 19.08 | 23.24 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 17.6 | 21.64 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 17.31 | 21.2 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 16.42 | 20.71 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 16.27 | 19.3 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 14.5 | 15.63 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G067800.1 | EnsemblPlantsGene:TraesCS3D01G067800 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF60 |
| PFAM:PF03514 | PFscan:PS50985 | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:29945453..29947483
Molecular Weight (calculated)
76353.0 Da
IEP (calculated)
7.140
GRAVY (calculated)
-0.440
Length
676 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSDKHSSA DFHSIMANTA GCGAPIESST AEYNDSEFVL HPPTPMSYSP AVSIVSNKIG PQFHNVSCDD TSAGWRLISA AEHPKTDSDV TLSYIEHMLM
101: QETDDKVRAP HGETAIRTVE EPFYELLGQK YPVLPDILSP CGCDRLKNLN GNVSRLNGKL CSNCSLYISS DDYHPNENSQ ASQAPWTLSA IVGEANKIPL
201: GAERMEIGLN INGLSIAEKP SRDNHSPHMN EKETIKDASS EVRGRKVFPD KEDLDLLEGR RSKQTAIFSD EPIRNEAFDK VLLCCEHQLV VDEGIILQQT
301: MANTSTKYAL KDQGKKLATQ TTRGITRRKK EVVDLRTLLI HCAEAVSVNN HSLASDILKT IRQHSSPSGD DTQRLAFYLA ECLEIRLSGN GSQINQNFIA
401: TPRNAAYILK LFHLGLKVSP YLRSSYYFSN KTIIDVSKGK PKVHIIDFGI CFGFQWPSLL KQFADREGGP PNLRITGIEL PTPGFRPDEI NNNTRLRLIE
501: YADMFKVPFE YRQISSKWES ITIKDLNIDK DELLVVNCIH RMKNLGDETT SINSARNRVL NNIRMMKPNI FIHGVVNGSY NTPFFLSRFK EVMYRYTSLF
601: DMIDKTTPRD NETRMILERD IYKYEILNAI ACEGSERIER PESYKIWKVR GLRARFEQLP LNPTIVDGIQ HIVRQI
101: QETDDKVRAP HGETAIRTVE EPFYELLGQK YPVLPDILSP CGCDRLKNLN GNVSRLNGKL CSNCSLYISS DDYHPNENSQ ASQAPWTLSA IVGEANKIPL
201: GAERMEIGLN INGLSIAEKP SRDNHSPHMN EKETIKDASS EVRGRKVFPD KEDLDLLEGR RSKQTAIFSD EPIRNEAFDK VLLCCEHQLV VDEGIILQQT
301: MANTSTKYAL KDQGKKLATQ TTRGITRRKK EVVDLRTLLI HCAEAVSVNN HSLASDILKT IRQHSSPSGD DTQRLAFYLA ECLEIRLSGN GSQINQNFIA
401: TPRNAAYILK LFHLGLKVSP YLRSSYYFSN KTIIDVSKGK PKVHIIDFGI CFGFQWPSLL KQFADREGGP PNLRITGIEL PTPGFRPDEI NNNTRLRLIE
501: YADMFKVPFE YRQISSKWES ITIKDLNIDK DELLVVNCIH RMKNLGDETT SINSARNRVL NNIRMMKPNI FIHGVVNGSY NTPFFLSRFK EVMYRYTSLF
601: DMIDKTTPRD NETRMILERD IYKYEILNAI ACEGSERIER PESYKIWKVR GLRARFEQLP LNPTIVDGIQ HIVRQI
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.