Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 96.97 | 96.36 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 96.49 | 95.88 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 46.25 | 75.32 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 73.37 | 74.31 |
| Zm00001d002573_P001 | Maize | cytosol | 70.18 | 70.63 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 69.7 | 70.14 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 69.86 | 67.18 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 46.09 | 49.49 |
| GSMUA_AchrUn_... | Banana | plastid | 45.3 | 48.55 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 41.79 | 46.62 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 41.15 | 45.26 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 34.45 | 44.54 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 39.71 | 43.76 |
| CDY27821 | Canola | cytosol | 30.78 | 43.47 |
| CDY00533 | Canola | cytosol | 30.62 | 43.05 |
| Bra028312.1-P | Field mustard | cytosol | 30.78 | 42.51 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 35.89 | 38.2 |
| CDY27063 | Canola | cytosol, plastid | 34.61 | 37.67 |
| Bra022596.1-P | Field mustard | plastid | 34.61 | 37.48 |
| CDX91655 | Canola | cytosol | 34.77 | 37.07 |
| Solyc06g036170.1.1 | Tomato | nucleus | 35.25 | 36.96 |
| PGSC0003DMT400076932 | Potato | nucleus | 35.25 | 36.47 |
| Solyc03g025170.1.1 | Tomato | nucleus | 35.25 | 35.02 |
| AT5G52510.1 | Thale cress | nucleus | 35.25 | 34.53 |
| KRG91573 | Soybean | plastid | 32.22 | 34.01 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 35.41 | 33.95 |
| KRH35251 | Soybean | plastid | 31.9 | 33.9 |
| KRH38397 | Soybean | plastid | 27.59 | 32.04 |
| KRH08880 | Soybean | plastid | 32.85 | 31.35 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 26.95 | 30.62 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 24.88 | 28.11 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 23.92 | 27.99 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 23.45 | 26.73 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 22.65 | 24.91 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 18.66 | 19.24 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 19.46 | 19.12 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 17.7 | 19.01 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 19.14 | 17.8 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 18.34 | 17.8 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 19.78 | 17.66 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 18.18 | 17.57 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 19.94 | 17.56 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 18.18 | 17.35 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 18.5 | 17.19 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 16.59 | 16.88 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 19.46 | 16.74 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 18.34 | 16.41 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 19.14 | 15.5 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 17.54 | 15.43 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 16.91 | 15.36 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 17.7 | 15.23 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 17.22 | 14.9 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 16.91 | 14.68 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 15.63 | 14.5 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 17.38 | 14.21 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 17.54 | 13.45 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G393200.1 | EnsemblPlantsGene:TraesCS2D01G393200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF127 | PFAM:PF03514 |
| PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr2D:+:502109067..502110950
Molecular Weight (calculated)
65940.0 Da
IEP (calculated)
7.072
GRAVY (calculated)
-0.141
Length
627 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGGPWRDP RQGYMYGLGS PMQMPAQQRS DPAAAGGVLK RSLGELERWQ HQRQYVMQQE LYMRAVRQRT AATSAAVSPL TSADIAAVLG GVPAQPFFSG
101: SSLGGGLASP SSTLSSLTTA SRAAMPLIQQ HVHRQAPFVP SSAHAQAHAL AVARVPAPSA AGSELSILQD LEKQLLGDDD EAEPAMSGTG STVTSSEWEE
201: TIQRLNSITA APSPPLYAEG TPNNKNNYSA AMTGSPSNSS TSTASSSASC SPPISATTSR QLLSEAAAAI ADGNLETAAA NLATLKRAAN PRGDAEQRLV
301: AVMVAALSSR IAPAASASSQ HLADLCGAKH HTGSQLLHDI TPCFRLALDA ANIAIVEAVA GHRVIHLVDF DINAPQHAAL IQRLADRRVP GTFLQVTAVT
401: DPTSPFTQSL AATLPGVGER LKKLAERAGI EYHFRMISCR AAEIEASKLG SEPGEALAVN LAFALSHVPD ESVSPANPRD ELLRRVRALG PQVVTLVEQE
501: LNSNTAPLAT RFSDAYLHYG AILDSLDSTV SRDSADRARA EEAVANMSAN AVGREGADRL ERCEVFGKWR ARFGMAGFRP VALAAGIADQ VMARVGAPPP
601: GLVVNQENGV LRLGWKQRVV AVASAWR
101: SSLGGGLASP SSTLSSLTTA SRAAMPLIQQ HVHRQAPFVP SSAHAQAHAL AVARVPAPSA AGSELSILQD LEKQLLGDDD EAEPAMSGTG STVTSSEWEE
201: TIQRLNSITA APSPPLYAEG TPNNKNNYSA AMTGSPSNSS TSTASSSASC SPPISATTSR QLLSEAAAAI ADGNLETAAA NLATLKRAAN PRGDAEQRLV
301: AVMVAALSSR IAPAASASSQ HLADLCGAKH HTGSQLLHDI TPCFRLALDA ANIAIVEAVA GHRVIHLVDF DINAPQHAAL IQRLADRRVP GTFLQVTAVT
401: DPTSPFTQSL AATLPGVGER LKKLAERAGI EYHFRMISCR AAEIEASKLG SEPGEALAVN LAFALSHVPD ESVSPANPRD ELLRRVRALG PQVVTLVEQE
501: LNSNTAPLAT RFSDAYLHYG AILDSLDSTV SRDSADRARA EEAVANMSAN AVGREGADRL ERCEVFGKWR ARFGMAGFRP VALAAGIADQ VMARVGAPPP
601: GLVVNQENGV LRLGWKQRVV AVASAWR
001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
Arabidopsis Description
SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.