CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38397	Soybean	plastid	75.04	91.3
KRH35251	Soybean	plastid	55.86	62.2
KRG91573	Soybean	plastid	56.16	62.12
CDY27821	Canola	cytosol	37.75	55.86
VIT_16s0050g00950.t01	Wine grape	cytosol, nucleus, plastid	49.92	55.69
CDY00533	Canola	cytosol	37.6	55.38
Bra028312.1-P	Field mustard	cytosol	37.75	54.63
CDY27063	Canola	cytosol, plastid	44.44	50.69
CDX91655	Canola	cytosol	45.05	50.34
Bra022596.1-P	Field mustard	plastid	44.29	50.26
AT5G52510.1	Thale cress	nucleus	47.18	48.44
Solyc03g025170.1.1	Tomato	nucleus	46.12	48.02
PGSC0003DMT400076932	Potato	nucleus	44.14	47.85
Solyc06g036170.1.1	Tomato	nucleus	42.92	47.16
PGSC0003DMT400026240	Potato	nucleus, plastid	46.73	46.94
GSMUA_Achr9P18770_001	Banana	cytosol	34.55	39.89
GSMUA_Achr1P03650_001	Banana	mitochondrion	34.09	39.3
GSMUA_Achr5P12810_001	Banana	cytosol, plastid	33.49	39.15
GSMUA_AchrUn_...	Banana	plastid	34.7	38.97
GSMUA_Achr4P26400_001	Banana	cytosol, mitochondrion, plastid	34.09	38.36
GSMUA_Achr4P24960_001	Banana	cytosol	26.64	36.08
Zm00001d026050_P001	Maize	mitochondrion, nucleus, plastid	33.49	35.31
Zm00001d002573_P001	Maize	cytosol	33.18	34.99
Os02t0681900-01	Rice	cytosol	32.27	34.3
Os04t0580300-01	Rice	cytosol, nucleus, plastid	31.66	33.6
EES05727	Sorghum	cytosol	32.12	33.55
TraesCS2B01G413500.1	Wheat	cytosol	31.96	33.28
TraesCS2D01G393200.1	Wheat	cytosol	31.35	32.85
TraesCS2A01G395400.1	Wheat	cytosol, mitochondrion, nucleus	31.51	32.81
EES12703	Sorghum	cytosol, nucleus, plastid	32.42	32.67
Zm00001d051461_P001	Maize	cytosol	30.14	32.62
KRH74015	Soybean	cytosol	25.11	30.5
KRH14104	Soybean	cytosol	24.81	29.91
KRH53364	Soybean	cytosol	27.25	29.83
KRH64568	Soybean	cytosol	26.64	29.36
HORVU2Hr1G094040.2	Barley	cytosol, plastid	17.2	29.35
KRH15917	Soybean	cytosol	26.18	29.1
KRH18097	Soybean	cytosol	26.03	28.93
KRH11548	Soybean	nucleus	24.2	28.8
KRH27129	Soybean	plastid	24.51	28.7
KRH36572	Soybean	cytosol	23.9	28.65
KRH22210	Soybean	cytosol, plastid	24.96	28.42
KRH51175	Soybean	cytosol	23.29	28.23
KRH01979	Soybean	cytosol	22.83	27.52
KRH46306	Soybean	cytosol	22.83	27.52
KRG98562	Soybean	nucleus	22.68	27.34
KRH55599	Soybean	plastid	23.44	27.11
KRH25905	Soybean	cytosol, plastid	23.29	26.94
KRH73868	Soybean	cytosol	21.46	25.87
KRH14274	Soybean	cytosol	21.16	25.5
KRH38269	Soybean	cytosol	9.13	17.0
KRH10240	Soybean	cytosol	15.53	16.83
KRH29773	Soybean	cytosol	15.53	16.61
KRH10243	Soybean	nucleus	16.59	16.39
KRH23089	Soybean	cytosol	15.83	16.15
KRH29771	Soybean	cytosol	16.59	16.03
KRH23094	Soybean	cytosol	13.39	15.91
KRH23095	Soybean	cytosol	15.68	15.68
KRH24773	Soybean	nucleus	16.29	15.57
KRH29774	Soybean	cytosol	14.92	15.53
KRH24780	Soybean	cytosol	15.37	15.3
KRH23090	Soybean	vacuole	14.46	15.3
KRH24775	Soybean	cytosol	15.68	15.15
KRH24778	Soybean	nucleus	15.53	15.09
KRH29775	Soybean	nucleus	15.37	15.01
KRH10241	Soybean	cytosol, nucleus, peroxisome	15.53	14.83
KRH29779	Soybean	cytosol	16.74	14.82
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	16.59	14.67
KRG99969	Soybean	cytosol	15.83	14.11
KRH49113	Soybean	cytosol	15.68	14.03
KRH65839	Soybean	cytosol, plastid	15.53	13.97

Protein Annotations

EntrezGene:100788551	MapMan:15.5.12	EMBL:ACUP02010214	EnsemblPlantsGene:GLYMA_16G179900	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1MPJ5	InterPro:IPR005202	EnsemblPlants:KRH08880
ProteinID:KRH08880	ProteinID:KRH08880.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF130
InterPro:Scarecrow-like_8	InterPro:TF_GRAS	UniParc:UPI000233AC09	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr16:-:34036942..34040157

Molecular Weight (calculated)

72357.6 Da

IEP (calculated)

7.084

GRAVY (calculated)

-0.452

Length

657 amino acids

Sequence
(BLAST)

001: MSSSGFPGGG GASEFFAGVG GFGGRSIPAT SMNNPNAAAS ATNNNLHPLY RTQQQQQQQQ QQNLPAMFLD PSSQIAQRQT PTLIGKRTLT EFQAYNQTNN
101: NPNHVLSNLL LRTVKPRTTF SHNHMDFPVP ELQSQNLYAN QTQRFGVPLL HQLRPQPINL PNNGPVPMTG PNFGYRNSNL GFPPNQNRVR VSPPVSVPVQ
201: VQSSEPEKKI MDHRLLELEK QLLEDNDEEG EADAASVITT SEWSETYQNL ISPGPVQKPV LTTTSPTSST TSSTSSSSSV ASPASGCSKQ TLMEAASAIV
301: EGKHDVAAEI LNRLNGVNRS DRLTDCMVSA LKSRMNPGEH PPPVAELFRK EHAESSQLLL DNSVCFKVGF MAANYAILEA AFEEKTENNR FCVVDFEIGK
401: GKQYLHLLNA LSARDQNAVV KIAAVAENGG EERVRAVGDM LSLLAEKLRI RFEFKIVATQ KITELTRESL GCEVDEVLMV NFAFNLNKIP DESVSTENPR
501: DELLRRVKRL APRVVTIVEQ EINANTAPFL ARVAETLSYY SALLESIEAT TAGRENNNNN LDRVRLEEGL SRKLHNSVAC EGRDRVERCE VFGKWRARMS
601: MAGFELKPLS QSMAESIKSR LTTANNRVNS GLTVKEENGG ICFGWMGRTL TVASAWR

Best Arabidopsis Sequence Match ( AT5G52510.1 )
(BLAST)

001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR

Arabidopsis Description

SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.