CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 4
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27129	Soybean	plastid	89.77	92.34
GSMUA_Achr8P03610_001	Banana	cytosol	20.28	81.25
KRH55599	Soybean	plastid	75.39	76.58
KRH25905	Soybean	cytosol, plastid	72.27	73.42
VIT_19s0014g04940.t01	Wine grape	cytosol	72.1	71.36
Solyc06g035620.2.1	Tomato	cytosol	39.69	70.25
Solyc07g063940.1.1	Tomato	cytosol, nucleus, peroxisome	66.9	66.21
PGSC0003DMT400049492	Potato	cytosol	66.38	65.81
Solyc12g005340.1.1	Tomato	cytosol	61.01	63.08
PGSC0003DMT400056120	Potato	cytosol	61.01	62.97
GSMUA_Achr6P24310_001	Banana	cytosol	56.85	61.31
HORVU2Hr1G043780.1	Barley	cytosol	58.06	58.77
EER97346	Sorghum	cytosol	57.71	58.42
TraesCS2B01G239400.1	Wheat	cytosol	57.71	58.42
Os07t0545800-01	Rice	cytosol, nucleus	57.54	58.14
TraesCS2D01G220200.1	Wheat	cytosol	57.37	58.07
TraesCS2A01G214400.1	Wheat	cytosol	57.02	57.72
Zm00001d006551_P001	Maize	golgi, mitochondrion	57.54	53.81
KRH14104	Soybean	cytosol	46.45	49.17
KRH74015	Soybean	cytosol	46.1	49.17
GSMUA_Achr9P12070_001	Banana	mitochondrion, plastid	43.85	48.65
KRG98562	Soybean	nucleus	43.15	45.69
KRH46306	Soybean	cytosol	42.11	44.59
KRH73868	Soybean	cytosol	41.94	44.4
KRH01979	Soybean	cytosol	41.59	44.04
KRH11548	Soybean	nucleus	42.11	44.02
KRH14274	Soybean	cytosol	41.42	43.85
KRH36572	Soybean	cytosol	41.59	43.8
KRH51175	Soybean	cytosol	40.9	43.54
GSMUA_Achr9P24710_001	Banana	endoplasmic reticulum, plastid	43.5	43.05
KRH18097	Soybean	cytosol	39.17	38.24
KRH15917	Soybean	cytosol	38.3	37.39
KRH64568	Soybean	cytosol	38.3	37.08
KRH53364	Soybean	cytosol	38.3	36.83
KRH38269	Soybean	cytosol	20.45	33.43
KRG91573	Soybean	plastid	27.73	26.94
KRH35251	Soybean	plastid	27.38	26.78
KRH08880	Soybean	plastid	28.42	24.96
KRH38397	Soybean	plastid	22.88	24.44
KRH29773	Soybean	cytosol	24.78	23.29
KRH29774	Soybean	cytosol	24.26	22.19
KRH29775	Soybean	nucleus	25.48	21.84
KRH10243	Soybean	nucleus	25.13	21.8
KRH24780	Soybean	cytosol	24.78	21.67
KRH24775	Soybean	cytosol	25.48	21.62
KRH23089	Soybean	cytosol	24.09	21.58
KRH23090	Soybean	vacuole	22.53	20.93
KRH24778	Soybean	nucleus	24.44	20.86
KRH10240	Soybean	cytosol	21.14	20.13
KRH23094	Soybean	cytosol	19.24	20.07
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	25.3	19.65
KRH29779	Soybean	cytosol	24.78	19.27
KRH29771	Soybean	cytosol	22.7	19.26
KRH23095	Soybean	cytosol	21.66	19.03
KRH10241	Soybean	cytosol, nucleus, peroxisome	22.53	18.9
KRH49113	Soybean	cytosol	23.74	18.66
KRH24773	Soybean	nucleus	22.18	18.63
KRH65839	Soybean	cytosol, plastid	23.4	18.49
KRG99969	Soybean	cytosol	23.4	18.32

Protein Annotations

EntrezGene:100799073	MapMan:15.5.12	EMBL:ACUP02008393	EnsemblPlantsGene:GLYMA_13G285400	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1M3G4	InterPro:IPR005202	EnsemblPlants:KRH22210
ProteinID:KRH22210	ProteinID:KRH22210.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF18
InterPro:TF_GRAS	UniParc:UPI000233BACF	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:38624145..38627680

Molecular Weight (calculated)

64480.5 Da

IEP (calculated)

5.466

GRAVY (calculated)

-0.315

Length

577 amino acids

Sequence
(BLAST)

001: MPSSFSMDSQ QLFSFELPYM SSLPTVPSLL GSLKYDTGNS PNSPFSTYFD SDTLSALSDG QEQYSPGEIL SGVSPSCNSS LETNHYMYRS VSTLDSFPLY
101: SDRNSLLQTM SSNQKIQHAL LELETALMAP DDDQVNTPNT LAESSRPMAS GQRSRSWSNE NHVSQYTQTQ PSYATANMQS SEVVHVEKRQ KLMEEATLQD
201: FPPNNLKQLL IACAKALSEN NTKDFDQLVG KAKDAVSING EPIQRLGAYM VEGLVARMQA SGNSIYHALR CREPEGEELL TYMQLLFEIC PYLKFGYMAA
301: NGAIAQACRN EDHIHIIDFQ IAQGTQWMTL LQALAARPGG APHVRITGID DPVSKYARGD GLEVVGKRLA LMSEKFGIPV EFHGVPVFAP NVTREMLDIR
401: PGEALAVNFP LQLHHTADES VHVSNPRDGL LRLVRSLSPK VTTLVEQESN TNTTPFFNRF IETLDYYLAI FESIDVTLPR DSKERINVEQ HCLARDIVNI
501: IACEGKERVE RHELFGKWKS RLTMAGFRQC PLSSYVNSVI RSLLMCYSEH YTLVEKDGAM LLGWKDRNLI SASAWHC

Best Arabidopsis Sequence Match ( AT1G50600.1 )
(BLAST)

001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR

Arabidopsis Description

SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.