CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29774	Soybean	cytosol	74.1	72.11
KRH29775	Soybean	nucleus	76.55	69.84
KRH24775	Soybean	cytosol	74.92	67.65
KRH24778	Soybean	nucleus	72.31	65.68
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	64.98	53.7
KRH10241	Soybean	cytosol, nucleus, peroxisome	58.79	52.47
PGSC0003DMT400005480	Potato	cytosol	39.41	49.69
GSMUA_Achr10P...	Banana	nucleus	34.53	47.96
Bra015584.1-P	Field mustard	cytosol	33.06	46.56
KRH24780	Soybean	cytosol	49.67	46.21
CDY47877	Canola	nucleus	44.46	44.17
CDY39530	Canola	cytosol	44.46	44.1
Bra028391.1-P	Field mustard	nucleus	44.3	43.87
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	44.95	43.81
GSMUA_Achr10P...	Banana	cytosol	42.51	43.57
Solyc06g076280.1.1	Tomato	cytosol	52.61	43.18
CDY06266	Canola	cytosol	44.3	43.04
PGSC0003DMT400077972	Potato	cytosol	52.61	42.95
GSMUA_Achr8P02550_001	Banana	nucleus	27.2	42.6
KRH29779	Soybean	cytosol	50.81	42.05
KRH10240	Soybean	cytosol	41.37	41.91
Bra031581.1-P	Field mustard	cytosol	45.44	41.77
TraesCS1B01G037500.1	Wheat	cytosol	27.85	41.4
GSMUA_Achr6P34090_001	Banana	nucleus	41.21	41.34
GSMUA_Achr7P15080_001	Banana	cytosol	40.23	41.3
KRH23090	Soybean	vacuole	41.69	41.22
KRH10243	Soybean	nucleus	44.46	41.05
CDY06265	Canola	cytosol	45.93	40.87
KRG99969	Soybean	cytosol	48.86	40.71
AT1G07520.3	Thale cress	cytosol	46.09	40.66
Bra031580.1-P	Field mustard	cytosol	45.6	40.58
HORVU3Hr1G012520.1	Barley	cytosol	30.13	40.57
KRH49113	Soybean	cytosol	48.37	40.46
KRH29771	Soybean	cytosol	44.79	40.44
Zm00001d034664_P001	Maize	plastid	36.81	40.43
CDY09912	Canola	cytosol	46.09	40.43
KRH23089	Soybean	cytosol	42.35	40.37
KRH65839	Soybean	cytosol, plastid	47.72	40.14
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	40.88	39.47
KRH24773	Soybean	nucleus	43.65	39.01
KRH23095	Soybean	cytosol	41.53	38.81
KRH23094	Soybean	cytosol	34.69	38.52
KXG38103	Sorghum	cytosol	39.25	38.5
Zm00001d011070_P001	Maize	cytosol	39.25	38.44
Zm00001d028603_P001	Maize	cytosol	45.93	38.42
OQU92829	Sorghum	cytosol	45.77	38.28
KXG37250	Sorghum	cytosol	40.55	38.25
KXG21080	Sorghum	cytosol	38.93	38.18
Os03t0690600-03	Rice	cytosol	45.28	38.03
TraesCS5B01G494500.1	Wheat	cytosol	40.23	37.6
TraesCS5D01G494900.1	Wheat	cytosol	40.07	37.44
TraesCS5A01G481300.1	Wheat	cytosol	39.9	37.4
KXG21079	Sorghum	cytosol	37.95	37.4
Zm00001d035671_P001	Maize	cytosol	37.95	37.22
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	38.93	37.11
CDY09911	Canola	nucleus	35.02	36.82
TraesCS5D01G152700.1	Wheat	cytosol, plastid	45.11	35.79
TraesCS5A01G139000.1	Wheat	cytosol, plastid	45.11	35.7
TraesCS5B01G138100.1	Wheat	cytosol, plastid	44.95	35.57
HORVU5Hr1G045020.29	Barley	cytosol	44.95	35.07
HORVU3Hr1G012550.6	Barley	cytosol	32.74	33.72
GSMUA_AchrUn_...	Banana	cytosol	36.16	33.69
Zm00001d047813_P002	Maize	nucleus	45.28	33.53
EES18882	Sorghum	cytosol	38.44	32.2
TraesCS1B01G037300.1	Wheat	cytosol	36.81	32.1
Zm00001d035670_P001	Maize	cytosol	37.95	32.09
TraesCS1D01G030900.1	Wheat	cytosol	36.81	31.7
TraesCS1D01G031000.1	Wheat	cytosol	37.13	31.45
TraesCS1D01G030800.1	Wheat	cytosol	35.5	31.1
OQU91407	Sorghum	nucleus	34.69	31.05
EES18880	Sorghum	cytosol	37.46	31.04
TraesCS1A01G030300.1	Wheat	cytosol	35.67	31.02
TraesCS3D01G067900.1	Wheat	nucleus	34.85	31.01
TraesCS1B01G037400.1	Wheat	cytosol	36.16	30.71
HORVU1Hr1G004440.1	Barley	cytosol	35.34	30.18
TraesCS3D01G067700.1	Wheat	cytosol	35.34	30.06
TraesCS3B01G081100.1	Wheat	nucleus	34.85	29.93
TraesCS3A01G068000.1	Wheat	nucleus	34.69	29.75
Zm00001d033166_P001	Maize	nucleus	35.02	29.37
TraesCS1D01G031200.1	Wheat	cytosol	34.85	29.36
TraesCS3D01G067800.1	Wheat	nucleus	32.25	29.29
TraesCS3B01G080900.1	Wheat	nucleus	34.2	29.13
TraesCS3A01G067900.1	Wheat	cytosol	34.2	29.09
KXG38064	Sorghum	nucleus	34.04	29.03
EER91260	Sorghum	nucleus	34.04	28.99
TraesCS1A01G030200.1	Wheat	cytosol	34.04	28.99
TraesCS3B01G081000.1	Wheat	cytosol	34.36	28.98
TraesCS1B01G037200.1	Wheat	nucleus	35.34	28.67
OQU91406	Sorghum	nucleus	34.85	28.61
KRH73868	Soybean	cytosol	23.78	26.79
KRH46306	Soybean	cytosol	23.45	26.42
KRG98562	Soybean	nucleus	23.29	26.24
KRH14274	Soybean	cytosol	23.13	26.05
KRH01979	Soybean	cytosol	22.48	25.32
KRH14104	Soybean	cytosol	22.48	25.32
KRH74015	Soybean	cytosol	22.15	25.14
KRH22210	Soybean	cytosol, plastid	23.29	24.78
KRH27129	Soybean	plastid	22.64	24.78
KRH36572	Soybean	cytosol	21.99	24.64
KRH51175	Soybean	cytosol	21.66	24.54
KRH11548	Soybean	nucleus	21.99	24.46
KRH55599	Soybean	plastid	22.48	24.3
KRH25905	Soybean	cytosol, plastid	21.99	23.77
KRH38269	Soybean	cytosol	12.87	22.38
KRH64568	Soybean	cytosol	20.85	21.48
KRH53364	Soybean	cytosol	20.85	21.33
KRH18097	Soybean	cytosol	20.03	20.81
KRH15917	Soybean	cytosol	19.87	20.64
KRG91573	Soybean	plastid	17.1	17.68
KRH35251	Soybean	plastid	16.94	17.63
KRH08880	Soybean	plastid	16.61	15.53
KRH38397	Soybean	plastid	13.36	15.19

Protein Annotations

EntrezGene:100794790	MapMan:15.5.12	EMBL:ACUP02006821	EnsemblPlantsGene:GLYMA_11G138100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1LK07	InterPro:IPR005202	EnsemblPlants:KRH29773
ProteinID:KRH29773	ProteinID:KRH29773.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF129
InterPro:TF_GRAS	UniParc:UPI000233C877	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:10512164..10519550

Molecular Weight (calculated)

70238.2 Da

IEP (calculated)

6.378

GRAVY (calculated)

-0.482

Length

614 amino acids

Sequence
(BLAST)

001: MEPNIPRGAE EQSTAYLMED SDFSETAKFI SQILMEENID QRPLYDTLTL QVTEKSFYDA LTGNIPLSPN PNQHPLLLSP QAQTTITEHG LSDLDSSLQQ
101: NLFNDADSVS HFKRGLEEAT KFLPPVSNLV TGQYPNGEQP INTFEGNSYG FQSRKNHERE EIDTREEEHE GRGHKQSALS LVDETDLSDA IDRVFLSVEN
201: VCIEHSSLQN GALKPKAPEV GKGRSKKQGR KKETVDLRNL LLMCSQSVYA NDIRTANELL KQIRQHSSPV GDASQRLAHY FANGLEARLI GAGSGAIGTF
301: SFVSSKRITA AEFLKAYQVF LSATPFKKFT YFFANQMIVK AAAKAEIIHI IDYGILYGFQ WPILIKFLSN REGGPPKLRI TGIEFPQSGF RPTERIEETG
401: HRLANYCKRY NVPFEYHAIA SRNWETIKLE ALKIERNELV AVNCHMRFEH LLDESTIEVN SPRNAFLHLI RKINPDIFTQ IIINGSYDAP FFATRFREAL
501: FHYSAIYDMF DTVITSENEW RMTIESELLG REVMNVIACE GSERVQRPET YKQWQVRNTR AGFKQLPLNE ELMAKFRSKL KEYHRDFVLD ENNNWMLQGW
601: KGRIFNASTC WFPA

Best Arabidopsis Sequence Match ( AT1G07520.3 )
(BLAST)

001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS

Arabidopsis Description

GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.