Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06266 | Canola | cytosol | 78.25 | 72.31 |
| Bra031581.1-P | Field mustard | cytosol | 79.79 | 69.76 |
| CDY06265 | Canola | cytosol | 71.75 | 60.72 |
| CDY09912 | Canola | cytosol | 71.06 | 59.29 |
| AT1G07520.3 | Thale cress | cytosol | 69.86 | 58.62 |
| CDY39530 | Canola | cytosol | 53.77 | 50.73 |
| CDY47877 | Canola | nucleus | 53.6 | 50.65 |
| CDX68389 | Canola | cytosol | 7.02 | 48.24 |
| KRH29773 | Soybean | cytosol | 36.82 | 35.02 |
| CDY71578 | Canola | nucleus, plastid | 31.16 | 34.93 |
| PGSC0003DMT400005480 | Potato | cytosol | 28.08 | 33.68 |
| GSMUA_Achr10P... | Banana | nucleus | 25.0 | 33.03 |
| KRH24778 | Soybean | nucleus | 37.5 | 32.4 |
| KRH29774 | Soybean | cytosol | 34.93 | 32.33 |
| CDX86475 | Canola | nucleus | 38.87 | 31.97 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 40.58 | 31.9 |
| CDY15616 | Canola | nucleus | 38.87 | 31.75 |
| KRH29775 | Soybean | nucleus | 36.47 | 31.65 |
| KRH24775 | Soybean | cytosol | 36.64 | 31.47 |
| Solyc06g076280.1.1 | Tomato | cytosol | 39.9 | 31.15 |
| PGSC0003DMT400077972 | Potato | cytosol | 39.9 | 30.98 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 16.78 | 30.91 |
| GSMUA_Achr10P... | Banana | cytosol | 31.51 | 30.72 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 35.96 | 30.52 |
| CDY47878 | Canola | nucleus | 35.79 | 30.25 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 32.88 | 30.19 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 20.21 | 30.1 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 31.51 | 30.07 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 22.95 | 29.39 |
| CDY31749 | Canola | cytosol | 36.47 | 29.34 |
| CDX77228 | Canola | cytosol | 33.39 | 29.02 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 31.85 | 28.88 |
| Zm00001d034664_P001 | Maize | plastid | 27.23 | 28.44 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 31.85 | 28.31 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 31.68 | 28.24 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 31.68 | 28.16 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.51 | 27.92 |
| KXG21080 | Sorghum | cytosol | 29.28 | 27.32 |
| KXG37250 | Sorghum | cytosol | 30.31 | 27.19 |
| KXG38103 | Sorghum | cytosol | 29.11 | 27.16 |
| CDX82987 | Canola | nucleus | 27.91 | 27.12 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 19.18 | 27.12 |
| Zm00001d011070_P001 | Maize | cytosol | 28.94 | 26.95 |
| Os03t0690600-03 | Rice | cytosol | 33.56 | 26.81 |
| OQU92829 | Sorghum | cytosol | 33.56 | 26.7 |
| CDY33040 | Canola | nucleus | 27.23 | 26.63 |
| Zm00001d028603_P001 | Maize | cytosol | 33.22 | 26.43 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 26.88 | 26.25 |
| KXG21079 | Sorghum | cytosol | 27.91 | 26.16 |
| Zm00001d035671_P001 | Maize | cytosol | 27.57 | 25.72 |
| CDX79750 | Canola | peroxisome | 29.28 | 25.37 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 29.11 | 25.26 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 25.34 | 24.83 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 32.71 | 24.61 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 32.53 | 24.55 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 32.53 | 24.48 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 32.88 | 24.4 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 27.57 | 23.33 |
| EER91260 | Sorghum | nucleus | 28.77 | 23.3 |
| Zm00001d047813_P002 | Maize | nucleus | 32.71 | 23.04 |
| Zm00001d033166_P001 | Maize | nucleus | 28.77 | 22.95 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 27.4 | 22.82 |
| KXG38064 | Sorghum | nucleus | 28.08 | 22.78 |
| OQU91407 | Sorghum | nucleus | 26.71 | 22.74 |
| Zm00001d035670_P001 | Maize | cytosol | 28.25 | 22.73 |
| OQU91406 | Sorghum | nucleus | 28.6 | 22.33 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 26.88 | 22.3 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 27.4 | 22.25 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 27.4 | 22.19 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 27.05 | 22.16 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 26.71 | 22.1 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 27.4 | 22.07 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 27.23 | 22.02 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 26.88 | 21.96 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 26.88 | 21.93 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 26.88 | 21.72 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 26.71 | 21.64 |
| EES18882 | Sorghum | cytosol | 27.05 | 21.56 |
| EES18880 | Sorghum | cytosol | 27.23 | 21.46 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 24.83 | 21.45 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 26.54 | 21.26 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 26.2 | 21.19 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 26.37 | 21.15 |
| CDX68388 | Canola | cytosol | 14.73 | 20.77 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 25.86 | 19.95 |
| CDY00883 | Canola | cytosol | 12.84 | 18.52 |
| CDY22807 | Canola | nucleus | 13.18 | 18.33 |
| CDY58168 | Canola | plastid | 16.61 | 18.3 |
| CDY50128 | Canola | cytosol, plastid | 16.61 | 18.2 |
| CDY37124 | Canola | nucleus | 13.01 | 18.1 |
| CDY42968 | Canola | cytosol | 16.44 | 17.94 |
| CDY35589 | Canola | cytosol | 16.27 | 17.89 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 15.07 | 17.71 |
| CDY61060 | Canola | cytosol | 16.27 | 17.63 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 14.9 | 17.5 |
| CDY71156 | Canola | cytosol, plastid | 11.64 | 17.44 |
| CDY71174 | Canola | cytosol, plastid | 14.73 | 17.3 |
| CDY05700 | Canola | cytosol, plastid | 14.55 | 17.1 |
| CDY19966 | Canola | cytosol | 14.38 | 17.0 |
| CDY00074 | Canola | cytosol, plastid | 14.38 | 16.9 |
| CDY00377 | Canola | cytosol | 15.75 | 16.73 |
| CDY68224 | Canola | cytosol | 16.44 | 16.67 |
| CDY50240 | Canola | cytosol | 16.27 | 16.49 |
| CDY27821 | Canola | cytosol | 12.5 | 16.44 |
| CDY00533 | Canola | cytosol | 12.16 | 15.92 |
| CDY07309 | Canola | cytosol | 5.99 | 14.58 |
| CDY27063 | Canola | cytosol, plastid | 13.87 | 14.06 |
| CDX91655 | Canola | cytosol | 13.53 | 13.44 |
Protein Annotations
| MapMan:15.5.12 | GO:A0A078F945 | UniProt:A0A078F945 | EnsemblPlants:CDY09911 | ProteinID:CDY09911 | ProteinID:CDY09911.1 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031674001 | InterPro:IPR005202 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF129 | InterPro:TF_GRAS | UniParc:UPI0004EDD6CE | SEG:seg | : | : |
Description
BnaC08g45400DBnaC08g45400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F945]
Coordinates
chrLK032000:+:39429..42460
Molecular Weight (calculated)
66677.0 Da
IEP (calculated)
4.918
GRAVY (calculated)
-0.668
Length
584 amino acids
Sequence
(BLAST)
(BLAST)
001: MESNFSGMVN GYEYYYDVSY LPNQTPNLGF GVPSSNDFDL RLDRVQPSIW VPSTQQDQDQ DQDQDSPPPG ADEMDSENTL LKYVNQLLME EETLAESQSM
101: SYDSLALRQT EEMLQQVITD SQTQSPYITP PYSINSSSSS SSGGPNMLRR FGQPANESMF GDANSVMQFK RGLEEASKFL PNTDQWIFNQ ERERNEKGYM
201: SRVRKHHHQL DEDDDEARRS KQSAANVDDG KLTEMFDKVL LLDNQLDPQI NDNVSSKALA SNKGRDQSVD FRTLLILCAQ SITIGDMITS HDLLRQIRNQ
301: SSPLGDASQR LAHFFANALE ARLQGSSGGY CKRFGVPFEY NAIASKNWET IRLEEFKIRP NEVLAVNAVL RFKNLRDVTP GEEDCPREGF LKLIRDMKPD
401: VFVNSTVNGS FNASFFTTRF KEALFHYTAV FDMFGSTLSR DNPERMHFEE VFYGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVEAELVESF
501: RVKMKKWGYH KDFVLDEDSN WFLQGGVITN GRRWCAQQEY HCNKGEVSQF YRSWGSNGSC LLVPATGKTT VARGTQKLET TLGL
101: SYDSLALRQT EEMLQQVITD SQTQSPYITP PYSINSSSSS SSGGPNMLRR FGQPANESMF GDANSVMQFK RGLEEASKFL PNTDQWIFNQ ERERNEKGYM
201: SRVRKHHHQL DEDDDEARRS KQSAANVDDG KLTEMFDKVL LLDNQLDPQI NDNVSSKALA SNKGRDQSVD FRTLLILCAQ SITIGDMITS HDLLRQIRNQ
301: SSPLGDASQR LAHFFANALE ARLQGSSGGY CKRFGVPFEY NAIASKNWET IRLEEFKIRP NEVLAVNAVL RFKNLRDVTP GEEDCPREGF LKLIRDMKPD
401: VFVNSTVNGS FNASFFTTRF KEALFHYTAV FDMFGSTLSR DNPERMHFEE VFYGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVEAELVESF
501: RVKMKKWGYH KDFVLDEDSN WFLQGGVITN GRRWCAQQEY HCNKGEVSQF YRSWGSNGSC LLVPATGKTT VARGTQKLET TLGL
001: MESNYSGVVN GYDVSFLPTS IPDLGFGVPS SSDFDLRMDQ YYHQPSIWVP DQDHHFSPPA DEIDSENTLL KYVNQLLMEE SLAEKQSIFY DSLALRQTEE
101: MLQQVISDSQ TQSSIPNNSI TTSSSSNSGD YSNSSNSSVR IENEVLFDNK HLGDSGVVSF PGSNMLRGGE QFGQPANEIL VRSMFSDAES VLQFKRGLEE
201: ASKFLPNTDQ WIFNLEPEME RVVPVKVEEG WSAISKTRKN HHEREEEEDD LEEARRRSKQ FAVNEEDGKL TEMFDKVLLL DGECDPQIIE DGENGSSKAL
301: VKKGRAKKKS RAVDFRTLLT LCAQSVSAGD KITADDLLRQ IRKQCSPVGD ASQRLAHFFA NALEARLEGS TGTMIQSYYD SISSKKRTAA QILKSYSVFL
401: SASPFMTLIY FFSNKMILDA AKDASVLHIV DFGILYGFQW PMFIQHLSKS NPGLRKLRIT GIEIPQHGLR PTERIQDTGR RLTEYCKRFG VPFEYNAIAS
501: KNWETIKMEE FKIRPNEVLA VNAVLRFKNL RDVIPGEEDC PRDGFLKLIR DMNPNVFLSS TVNGSFNAPF FTTRFKEALF HYSALFDLFG ATLSKENPER
601: IHFEGEFYGR EVMNVIACEG VDRVERPETY KQWQVRMIRA GFKQKPVEAE LVQLFREKMK KWGYHKDFVL DEDSNWFLQG WKGRILFSSS CWVPS
101: MLQQVISDSQ TQSSIPNNSI TTSSSSNSGD YSNSSNSSVR IENEVLFDNK HLGDSGVVSF PGSNMLRGGE QFGQPANEIL VRSMFSDAES VLQFKRGLEE
201: ASKFLPNTDQ WIFNLEPEME RVVPVKVEEG WSAISKTRKN HHEREEEEDD LEEARRRSKQ FAVNEEDGKL TEMFDKVLLL DGECDPQIIE DGENGSSKAL
301: VKKGRAKKKS RAVDFRTLLT LCAQSVSAGD KITADDLLRQ IRKQCSPVGD ASQRLAHFFA NALEARLEGS TGTMIQSYYD SISSKKRTAA QILKSYSVFL
401: SASPFMTLIY FFSNKMILDA AKDASVLHIV DFGILYGFQW PMFIQHLSKS NPGLRKLRIT GIEIPQHGLR PTERIQDTGR RLTEYCKRFG VPFEYNAIAS
501: KNWETIKMEE FKIRPNEVLA VNAVLRFKNL RDVIPGEEDC PRDGFLKLIR DMNPNVFLSS TVNGSFNAPF FTTRFKEALF HYSALFDLFG ATLSKENPER
601: IHFEGEFYGR EVMNVIACEG VDRVERPETY KQWQVRMIRA GFKQKPVEAE LVQLFREKMK KWGYHKDFVL DEDSNWFLQG WKGRILFSSS CWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.