Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036185.1-P | Field mustard | cytosol | 97.57 | 97.37 |
| CDY00074 | Canola | cytosol, plastid | 97.57 | 96.98 |
| CDY05700 | Canola | cytosol, plastid | 89.47 | 88.93 |
| CDY71174 | Canola | cytosol, plastid | 88.66 | 88.13 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 88.26 | 87.73 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 87.45 | 86.92 |
| AT5G48150.4 | Thale cress | cytosol | 85.02 | 85.71 |
| CDY00883 | Canola | cytosol | 54.86 | 66.91 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 44.13 | 66.46 |
| VIT_12s0057g00560.t01 | Wine grape | cytosol | 70.85 | 64.22 |
| PGSC0003DMT400015696 | Potato | cytosol | 68.42 | 63.18 |
| KRH14104 | Soybean | cytosol | 69.03 | 62.57 |
| KRH74015 | Soybean | cytosol | 68.42 | 62.48 |
| Solyc07g047950.1.1 | Tomato | mitochondrion | 68.42 | 62.02 |
| CDY07309 | Canola | cytosol | 29.76 | 61.25 |
| CDY71156 | Canola | cytosol, plastid | 47.98 | 60.77 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 50.4 | 58.45 |
| CDY37124 | Canola | nucleus | 49.19 | 57.86 |
| CDY22807 | Canola | nucleus | 48.99 | 57.62 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 44.94 | 55.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.37 | 54.67 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 54.25 | 53.49 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 55.47 | 51.12 |
| Os03t0193000-01 | Rice | plastid | 55.26 | 51.03 |
| Zm00001d030500_P001 | Maize | nucleus | 55.47 | 50.55 |
| EER95348 | Sorghum | cytosol | 54.25 | 50.0 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 56.28 | 49.91 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 54.05 | 49.81 |
| Os07t0583600-01 | Rice | plasma membrane | 54.66 | 49.63 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 55.47 | 49.46 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 55.06 | 49.45 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 53.64 | 49.44 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 55.26 | 49.28 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 55.26 | 49.19 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 53.24 | 48.98 |
| Zm00001d021946_P001 | Maize | cytosol | 55.26 | 48.92 |
| EER97449 | Sorghum | cytosol | 54.05 | 48.81 |
| Zm00001d006701_P001 | Maize | cytosol | 54.45 | 48.56 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 47.77 | 48.26 |
| CDY35589 | Canola | cytosol | 46.96 | 43.69 |
| CDY50128 | Canola | cytosol, plastid | 46.96 | 43.53 |
| CDY58168 | Canola | plastid | 46.56 | 43.4 |
| CDY42968 | Canola | cytosol | 46.36 | 42.8 |
| HORVU5Hr1G099160.1 | Barley | plastid | 54.45 | 42.7 |
| CDY00377 | Canola | cytosol | 42.51 | 38.18 |
| CDY61060 | Canola | cytosol | 41.5 | 38.03 |
| CDY68224 | Canola | cytosol | 41.7 | 35.76 |
| CDY50240 | Canola | cytosol | 41.7 | 35.76 |
| CDY27821 | Canola | cytosol | 28.95 | 32.21 |
| CDY00533 | Canola | cytosol | 28.54 | 31.61 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 19.43 | 30.28 |
| CDX68389 | Canola | cytosol | 4.86 | 28.24 |
| CDY27063 | Canola | cytosol, plastid | 29.15 | 25.0 |
| CDX91655 | Canola | cytosol | 29.35 | 24.66 |
| CDY71578 | Canola | nucleus, plastid | 25.51 | 24.18 |
| CDY33040 | Canola | nucleus | 25.3 | 20.94 |
| CDY47877 | Canola | nucleus | 25.91 | 20.71 |
| CDY39530 | Canola | cytosol | 25.51 | 20.36 |
| CDX82987 | Canola | nucleus | 24.29 | 19.97 |
| CDY47878 | Canola | nucleus | 27.73 | 19.83 |
| CDX68388 | Canola | cytosol | 15.99 | 19.08 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 25.91 | 19.02 |
| CDX79750 | Canola | peroxisome | 25.91 | 18.99 |
| CDY06266 | Canola | cytosol | 24.29 | 18.99 |
| CDX86475 | Canola | nucleus | 26.92 | 18.73 |
| CDY31749 | Canola | cytosol | 26.52 | 18.04 |
| CDX77228 | Canola | cytosol | 24.49 | 18.01 |
| CDY06265 | Canola | cytosol | 24.9 | 17.83 |
| CDY15616 | Canola | nucleus | 25.3 | 17.48 |
| CDY09912 | Canola | cytosol | 24.49 | 17.29 |
| CDY09911 | Canola | nucleus | 17.0 | 14.38 |
Protein Annotations
| EnsemblPlants:CDY19966 | EnsemblPlantsGene:GSBRNA2T00009781001 | GO:A0A078G3N5 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF57 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY19966 | ProteinID:CDY19966.1 |
| SEG:seg | UniParc:UPI0004EED779 | UniProt:A0A078G3N5 | MapMan:15.5.12 | : | : |
Description
BnaA09g02850DBnaA09g02850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3N5]
Coordinates
chrLK032102:+:181246..183854
Molecular Weight (calculated)
55440.1 Da
IEP (calculated)
6.892
GRAVY (calculated)
-0.298
Length
494 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKHPRQEIE AYSLPPVGKL RYVPVNNSRK RYCMLEPSSS SSPDSTVLVS NNNNNSTHEE DTSASCVTDD FNDKIKELET AMMGPDSLDS ALYYNDSFVS
101: TPCQVTNSWR STLEAVSRRD LRADLVSCAK AMSENDLMMA NSMMEKLRLM VSVSGEPIQR LGAYLLEGLV AQLASSGSSI YKSLNRCPEP ASNELLSYMH
201: ILYEVCPYFK FGYMSANGAI AEAMKNENRV HIIDFQIGQG SQWVTLIQAF AERPGGPPWI RITGIDDMAS AYARGGGLSI VGNRLARLAK KFNVPFEFNS
301: VSVSVSVAEV KHNNLGVRTG EALAVNFAFV LHHMPDESVS TENHRDRLLR MVKGLSPKVV TLVEQESNTN TAAFFPRFME TMDYYDAMFE SIDVTLPRNH
401: KQRINVEQHC LARDVVNIIA CEGADRVERH ELLGKWRSRF GMAGFTSYPL SPLVNSTIKR LLSNYSDKYR LEERDGALYL GWMKRDLVAS CAWK
101: TPCQVTNSWR STLEAVSRRD LRADLVSCAK AMSENDLMMA NSMMEKLRLM VSVSGEPIQR LGAYLLEGLV AQLASSGSSI YKSLNRCPEP ASNELLSYMH
201: ILYEVCPYFK FGYMSANGAI AEAMKNENRV HIIDFQIGQG SQWVTLIQAF AERPGGPPWI RITGIDDMAS AYARGGGLSI VGNRLARLAK KFNVPFEFNS
301: VSVSVSVAEV KHNNLGVRTG EALAVNFAFV LHHMPDESVS TENHRDRLLR MVKGLSPKVV TLVEQESNTN TAAFFPRFME TMDYYDAMFE SIDVTLPRNH
401: KQRINVEQHC LARDVVNIIA CEGADRVERH ELLGKWRSRF GMAGFTSYPL SPLVNSTIKR LLSNYSDKYR LEERDGALYL GWMKRDLVAS CAWK
001: MRLSVFIIPL VESRQASGII NKQSTSLLIR FSLYLEASIS TKSFFSKSQR ISQTQSPICL SANYYQPDNL DMEATQKHMI QEGSSMFYHQ PSSVKQMDLS
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
101: VQTFDSYCTL ESSSGTKSHP CLNNKNNSSS TTSFSSNESP ISQANNNNLS RFNNHSPEEN NNSPLSGSSA TNTNETELSL MLKDLETAMM EPDVDNSYNN
201: QGGFGQQHGV VSSAMYRSME MISRGDLKGV LYECAKAVEN YDLEMTDWLI SQLQQMVSVS GEPVQRLGAY MLEGLVARLA SSGSSIYKAL RCKDPTGPEL
301: LTYMHILYEA CPYFKFGYES ANGAIAEAVK NESFVHIIDF QISQGGQWVS LIRALGARPG GPPNVRITGI DDPRSSFARQ GGLELVGQRL GKLAEMCGVP
401: FEFHGAALCC TEVEIEKLGV RNGEALAVNF PLVLHHMPDE SVTVENHRDR LLRLVKHLSP NVVTLVEQEA NTNTAPFLPR FVETMNHYLA VFESIDVKLA
501: RDHKERINVE QHCLAREVVN LIACEGVERE ERHEPLGKWR SRFHMAGFKP YPLSSYVNAT IKGLLESYSE KYTLEERDGA LYLGWKNQPL ITSCAWR
Arabidopsis Description
SCL5scarecrow-like 5 [Source:TAIR;Acc:AT1G50600]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.