Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86324 | Canola | cytosol, nucleus, plastid | 97.18 | 97.18 |
| CDY05700 | Canola | cytosol, plastid | 89.94 | 89.94 |
| CDY71174 | Canola | cytosol, plastid | 89.74 | 89.74 |
| CDY00074 | Canola | cytosol, plastid | 87.93 | 87.93 |
| CDY19966 | Canola | cytosol | 86.92 | 87.45 |
| AT5G48150.4 | Thale cress | cytosol | 86.12 | 87.35 |
| GSMUA_Achr4P07010_001 | Banana | cytosol | 44.27 | 67.07 |
| CDY00883 | Canola | cytosol | 54.53 | 66.91 |
| PGSC0003DMT400015696 | Potato | cytosol | 70.22 | 65.23 |
| VIT_12s0057g00560.t01 | Wine grape | cytosol | 70.83 | 64.59 |
| Solyc07g047950.1.1 | Tomato | mitochondrion | 70.02 | 63.85 |
| KRH74015 | Soybean | cytosol | 69.22 | 63.59 |
| KRH14104 | Soybean | cytosol | 69.42 | 63.3 |
| CDY07309 | Canola | cytosol | 29.78 | 61.67 |
| CDY71156 | Canola | cytosol, plastid | 48.29 | 61.54 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 50.7 | 59.15 |
| CDY37124 | Canola | nucleus | 49.09 | 58.1 |
| CDY22807 | Canola | nucleus | 49.09 | 58.1 |
| GSMUA_Achr4P11050_001 | Banana | nucleus | 45.47 | 56.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.89 | 55.61 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 54.53 | 54.09 |
| Os03t0193000-01 | Rice | plastid | 55.94 | 51.96 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 55.94 | 51.87 |
| Zm00001d030500_P001 | Maize | nucleus | 56.14 | 51.48 |
| EER95348 | Sorghum | cytosol | 55.33 | 51.31 |
| HORVU4Hr1G071670.1 | Barley | cytosol | 54.53 | 50.56 |
| Os07t0583600-01 | Rice | plasma membrane | 55.13 | 50.37 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 54.12 | 50.19 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 55.33 | 50.0 |
| HORVU2Hr1G036280.1 | Barley | cytosol | 55.53 | 49.55 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 55.13 | 49.46 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 55.13 | 49.46 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 53.32 | 49.35 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 54.93 | 49.19 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 48.29 | 49.08 |
| Zm00001d021946_P001 | Maize | cytosol | 54.93 | 48.92 |
| Zm00001d006701_P001 | Maize | cytosol | 54.53 | 48.92 |
| EER97449 | Sorghum | cytosol | 53.52 | 48.63 |
| CDY35589 | Canola | cytosol | 47.28 | 44.26 |
| CDY50128 | Canola | cytosol, plastid | 47.08 | 43.9 |
| CDY58168 | Canola | plastid | 46.68 | 43.77 |
| HORVU5Hr1G099160.1 | Barley | plastid | 55.33 | 43.65 |
| CDY42968 | Canola | cytosol | 46.88 | 43.55 |
| CDY00377 | Canola | cytosol | 42.05 | 38.0 |
| CDY61060 | Canola | cytosol | 40.85 | 37.66 |
| CDY50240 | Canola | cytosol | 42.05 | 36.28 |
| CDY68224 | Canola | cytosol | 42.05 | 36.28 |
| CDY27821 | Canola | cytosol | 28.77 | 32.21 |
| CDY00533 | Canola | cytosol | 28.37 | 31.61 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 19.72 | 30.91 |
| CDX68389 | Canola | cytosol | 5.03 | 29.41 |
| CDY27063 | Canola | cytosol, plastid | 29.38 | 25.35 |
| CDY71578 | Canola | nucleus, plastid | 26.16 | 24.95 |
| CDX91655 | Canola | cytosol | 29.18 | 24.66 |
| CDY33040 | Canola | nucleus | 25.55 | 21.27 |
| CDY47877 | Canola | nucleus | 26.36 | 21.2 |
| CDY39530 | Canola | cytosol | 25.96 | 20.84 |
| CDY47878 | Canola | nucleus | 28.57 | 20.55 |
| CDX79750 | Canola | peroxisome | 27.16 | 20.03 |
| CDX82987 | Canola | nucleus | 24.14 | 19.97 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 26.96 | 19.91 |
| CDY06266 | Canola | cytosol | 24.35 | 19.15 |
| CDX68388 | Canola | cytosol | 15.9 | 19.08 |
| CDX77228 | Canola | cytosol | 25.55 | 18.9 |
| CDX86475 | Canola | nucleus | 26.96 | 18.87 |
| CDY31749 | Canola | cytosol | 27.57 | 18.87 |
| CDY06265 | Canola | cytosol | 24.75 | 17.83 |
| CDY15616 | Canola | nucleus | 25.55 | 17.76 |
| CDY09912 | Canola | cytosol | 24.35 | 17.29 |
| CDY09911 | Canola | nucleus | 17.5 | 14.9 |
Protein Annotations
| EnsemblPlants:CDY54511 | EnsemblPlantsGene:GSBRNA2T00014243001 | GO:A0A078IZC4 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF57 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY54511 | ProteinID:CDY54511.1 |
| UniParc:UPI0004EDEF88 | UniProt:A0A078IZC4 | MapMan:15.5.12 | : | : | : |
Description
BnaC07g49170DBnaC07g49170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZC4]
Coordinates
chrLK033326:+:10138..12485
Molecular Weight (calculated)
55710.3 Da
IEP (calculated)
6.736
GRAVY (calculated)
-0.298
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKHPRQKTE AYTLPPFEAS SVGKLRYIPA HNSLKRYCML EPSSSSLVSP AYAVLSNANS SAHEDTSGSC VTDDFNDKIK ELETVMMGPD SLDLVFDYND
101: SFDSTSCQET NSWRSTLEAI SRRDLRADLV SCAQALSEND LMMAHSMMEK LRQMVSVSGE PIQRLGAYLL EGLVAKLASS GSSIYKSLNR FPEPASTELL
201: SYMHILYEVC PYFKFGYMSA NGAIAEAMKE ENRVHIIDFQ IGTQGSQWVT LIQAFAARPG GPPRIRITGI DDTTSAYARG GGLSIVGNRL AKLAKQFNVP
301: FEFNSVSASA SEVKLKDLGV RAGEALAVNF AFVLHRMPDE SVSTENHRDR LLRMVKSLSP KVVTLVEQES NTNTASFFPR FKETMDYYDA MFESIDVTLP
401: RNHKQRINVE QHCLARDVVN IIACEGADRV ERHELLGKWR SRFEMAGFSS YPLSPLVNST IKSLLRNYSD KYRLEERDGA LYLGWMQRDL VASCAWK
101: SFDSTSCQET NSWRSTLEAI SRRDLRADLV SCAQALSEND LMMAHSMMEK LRQMVSVSGE PIQRLGAYLL EGLVAKLASS GSSIYKSLNR FPEPASTELL
201: SYMHILYEVC PYFKFGYMSA NGAIAEAMKE ENRVHIIDFQ IGTQGSQWVT LIQAFAARPG GPPRIRITGI DDTTSAYARG GGLSIVGNRL AKLAKQFNVP
301: FEFNSVSASA SEVKLKDLGV RAGEALAVNF AFVLHRMPDE SVSTENHRDR LLRMVKSLSP KVVTLVEQES NTNTASFFPR FKETMDYYDA MFESIDVTLP
401: RNHKQRINVE QHCLARDVVN IIACEGADRV ERHELLGKWR SRFEMAGFSS YPLSPLVNST IKSLLRNYSD KYRLEERDGA LYLGWMQRDL VASCAWK
001: MYKQPRQELE AYYFEPNSVE KLRYLPVNNS RKRFCTLEPF PDSPPYNALS TATYDDTCGS CVTDELNDFK HKIREIETVM MGPDSLDLLV DCTDSFDSTA
101: SQEINGWRST LEAISRRDLR ADLVSCAKAM SENDLMMAHS MMEKLRQMVS VSGEPIQRLG AYLLEGLVAQ LASSGSSIYK ALNRCPEPAS TELLSYMHIL
201: YEVCPYFKFG YMSANGAIAE AMKEENRVHI IDFQIGQGSQ WVTLIQAFAA RPGGPPRIRI TGIDDMTSAY ARGGGLSIVG NRLAKLAKQF NVPFEFNSVS
301: VSVSEVKPKN LGVRPGEALA VNFAFVLHHM PDESVSTENH RDRLLRMVKS LSPKVVTLVE QESNTNTAAF FPRFMETMNY YAAMFESIDV TLPRDHKQRI
401: NVEQHCLARD VVNIIACEGA DRVERHELLG KWRSRFGMAG FTPYPLSPLV NSTIKSLLRN YSDKYRLEER DGALYLGWMH RDLVASCAWK
101: SQEINGWRST LEAISRRDLR ADLVSCAKAM SENDLMMAHS MMEKLRQMVS VSGEPIQRLG AYLLEGLVAQ LASSGSSIYK ALNRCPEPAS TELLSYMHIL
201: YEVCPYFKFG YMSANGAIAE AMKEENRVHI IDFQIGQGSQ WVTLIQAFAA RPGGPPRIRI TGIDDMTSAY ARGGGLSIVG NRLAKLAKQF NVPFEFNSVS
301: VSVSEVKPKN LGVRPGEALA VNFAFVLHHM PDESVSTENH RDRLLRMVKS LSPKVVTLVE QESNTNTAAF FPRFMETMNY YAAMFESIDV TLPRDHKQRI
401: NVEQHCLARD VVNIIACEGA DRVERHELLG KWRSRFGMAG FTPYPLSPLV NSTIKSLLRN YSDKYRLEER DGALYLGWMH RDLVASCAWK
Arabidopsis Description
PAT1Scarecrow-like transcription factor PAT1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LDL7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.