Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 98.37 | 98.51 |
| AT2G37650.1 | Thale cress | cytosol | 85.61 | 80.36 |
| CDX68389 | Canola | cytosol | 7.12 | 56.47 |
| PGSC0003DMT400049420 | Potato | cytosol | 51.19 | 51.96 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 24.04 | 51.1 |
| GSMUA_Achr10P... | Banana | nucleus | 32.2 | 49.09 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 51.34 | 48.8 |
| KRH65839 | Soybean | cytosol, plastid | 52.08 | 48.08 |
| KRH49113 | Soybean | cytosol | 52.23 | 47.96 |
| KRG99969 | Soybean | cytosol | 52.23 | 47.76 |
| Solyc10g086530.1.1 | Tomato | cytosol | 52.23 | 46.25 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 26.71 | 45.92 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 51.78 | 45.86 |
| GSMUA_Achr10P... | Banana | cytosol | 40.65 | 45.74 |
| Solyc09g010920.1.1 | Tomato | cytosol | 51.48 | 45.6 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 29.67 | 43.86 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.85 | 43.83 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 39.76 | 43.79 |
| Zm00001d034664_P001 | Maize | plastid | 35.76 | 43.11 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 37.98 | 42.81 |
| Os03t0690600-03 | Rice | cytosol | 45.4 | 41.86 |
| OQU92829 | Sorghum | cytosol | 44.96 | 41.28 |
| Zm00001d028603_P001 | Maize | cytosol | 44.81 | 41.14 |
| CDY71578 | Canola | nucleus, plastid | 31.75 | 41.07 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 38.72 | 41.04 |
| KXG38103 | Sorghum | cytosol | 37.24 | 40.1 |
| CDX86475 | Canola | nucleus | 41.99 | 39.86 |
| KXG21079 | Sorghum | cytosol | 36.8 | 39.81 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 38.58 | 39.69 |
| KXG37250 | Sorghum | cytosol | 38.28 | 39.63 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 37.83 | 39.6 |
| CDY47877 | Canola | nucleus | 36.2 | 39.48 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 38.43 | 39.42 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 38.43 | 39.42 |
| CDY39530 | Canola | cytosol | 36.2 | 39.42 |
| KXG21080 | Sorghum | cytosol | 36.35 | 39.14 |
| Zm00001d035671_P001 | Maize | cytosol | 36.2 | 38.98 |
| CDY33040 | Canola | nucleus | 34.42 | 38.86 |
| Zm00001d011070_P001 | Maize | cytosol | 36.05 | 38.76 |
| CDX77228 | Canola | cytosol | 38.28 | 38.39 |
| CDY47878 | Canola | nucleus | 39.32 | 38.35 |
| CDX82987 | Canola | nucleus | 34.12 | 38.27 |
| CDY31749 | Canola | cytosol | 40.65 | 37.74 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 43.32 | 37.73 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 43.32 | 37.63 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 43.18 | 37.5 |
| CDY15616 | Canola | nucleus | 39.76 | 37.48 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.65 | 37.48 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 43.62 | 37.36 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 32.94 | 37.25 |
| Zm00001d047813_P002 | Maize | nucleus | 45.4 | 36.91 |
| CDY06266 | Canola | cytosol | 33.23 | 35.44 |
| Zm00001d035670_P001 | Maize | cytosol | 37.54 | 34.85 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 36.05 | 34.52 |
| EES18882 | Sorghum | cytosol | 37.54 | 34.52 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 36.35 | 34.36 |
| CDY06265 | Canola | cytosol | 34.87 | 34.06 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 36.05 | 33.8 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 34.57 | 33.77 |
| OQU91407 | Sorghum | nucleus | 34.27 | 33.67 |
| CDX68388 | Canola | cytosol | 20.62 | 33.57 |
| EER91260 | Sorghum | nucleus | 35.91 | 33.56 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 34.87 | 33.52 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 36.05 | 33.52 |
| EES18880 | Sorghum | cytosol | 36.8 | 33.47 |
| CDY09912 | Canola | cytosol | 34.72 | 33.43 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 35.46 | 33.06 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 35.16 | 32.83 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 34.72 | 32.73 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 32.79 | 32.69 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 34.72 | 32.68 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 34.12 | 32.58 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.72 | 32.45 |
| KXG38064 | Sorghum | nucleus | 34.57 | 32.36 |
| Zm00001d033166_P001 | Maize | nucleus | 35.01 | 32.24 |
| CDY07309 | Canola | cytosol | 11.42 | 32.08 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 34.57 | 31.96 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 34.12 | 31.9 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 33.98 | 31.72 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 34.12 | 31.59 |
| OQU91406 | Sorghum | nucleus | 34.72 | 31.28 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 33.38 | 29.72 |
| CDY00883 | Canola | cytosol | 17.8 | 29.63 |
| CDY09911 | Canola | nucleus | 25.37 | 29.28 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 20.03 | 27.16 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 20.03 | 27.16 |
| CDY71156 | Canola | cytosol, plastid | 15.58 | 26.92 |
| CDY42968 | Canola | cytosol | 20.92 | 26.36 |
| CDY35589 | Canola | cytosol | 20.62 | 26.18 |
| CDY58168 | Canola | plastid | 20.47 | 26.04 |
| CDY19966 | Canola | cytosol | 18.99 | 25.91 |
| CDY00074 | Canola | cytosol, plastid | 18.99 | 25.75 |
| CDY22807 | Canola | nucleus | 16.02 | 25.71 |
| CDY37124 | Canola | nucleus | 16.02 | 25.71 |
| CDY05700 | Canola | cytosol, plastid | 18.84 | 25.55 |
| CDY71174 | Canola | cytosol, plastid | 18.84 | 25.55 |
| CDY50128 | Canola | cytosol, plastid | 20.18 | 25.52 |
| CDY27821 | Canola | cytosol | 15.43 | 23.42 |
| CDY61060 | Canola | cytosol | 18.55 | 23.19 |
| CDY00533 | Canola | cytosol | 14.99 | 22.65 |
| CDY68224 | Canola | cytosol | 19.29 | 22.57 |
| CDY00377 | Canola | cytosol | 18.4 | 22.55 |
| CDY50240 | Canola | cytosol | 19.14 | 22.4 |
| CDY27063 | Canola | cytosol, plastid | 16.62 | 19.44 |
| CDX91655 | Canola | cytosol | 16.17 | 18.54 |
Protein Annotations
| EnsemblPlants:CDX79750 | EnsemblPlantsGene:GSBRNA2T00132574001 | GO:A0A078CSF1 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF44 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDX79750 | ProteinID:CDX79750.1 | SEG:seg |
| UniParc:UPI0004EE07D0 | MapMan:15.5.12 | : | : | : | : |
Description
BnaC03g20860D
Coordinates
chrLK031818:+:2109042..2111494
Molecular Weight (calculated)
75882.1 Da
IEP (calculated)
6.911
GRAVY (calculated)
-0.460
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MITDPAPVDR TRLPDQPSSL TLFDGYNYNH GLSNNQNAFA TSAAGEEEDP ADEFDFSDAV LGYISQILME EDMDDRVCML QESLDLEAAE RSLYEAIGKK
101: YPPSPERSSP YIENLDHVVP AGDRNGSGGG FMSGGMKPMS GGGFTLDFRN PQSRCSPVLS VPQSPYGVHE SWNASRDDQS VWLFRRGVEE DSERNEMIVN
201: FREDSRSKGR RNPNSGEEER CSKLPAVFSE TILRSDVVDK ILVHVPGGES MKEFDALREV LKKGVGKKKA SAPQEGKRRA RGRGRGRGRG GGVKKEVVDL
301: RSLLIHCAQA VAADDSRCAG QLLKQIRQHS TPFGDGNQRL AHCFANGLEA RLAGTGSQIY KGIVSKPRSA AAVLKAHQLF LACCPFRKLS YFITNKTIRD
401: LVGNSPRVHV IDFGILYGFQ WPTLIHRFSI YGKPKVRVTG IEFPQPGFRP TQRVEETGER LAAYAKQFGV PFEYKAIAKK WDAVQLEDLD IDRDEITVVN
501: CLYRAENLHD ESVKVESCRD AVLSLIGKIN PDLFVFGIVN GAYNAPFFVT RFREALFHFS SIFDMLETIV PREDEERMFL EMEVFGREAL NVIACEGWER
601: VERPETYKQW HVRAMRSGLV QVPFDPDIMK TSLHKVNTFY HKDFVIDQDN RWLLQGWKGR TVMALSVWKP ESKA
101: YPPSPERSSP YIENLDHVVP AGDRNGSGGG FMSGGMKPMS GGGFTLDFRN PQSRCSPVLS VPQSPYGVHE SWNASRDDQS VWLFRRGVEE DSERNEMIVN
201: FREDSRSKGR RNPNSGEEER CSKLPAVFSE TILRSDVVDK ILVHVPGGES MKEFDALREV LKKGVGKKKA SAPQEGKRRA RGRGRGRGRG GGVKKEVVDL
301: RSLLIHCAQA VAADDSRCAG QLLKQIRQHS TPFGDGNQRL AHCFANGLEA RLAGTGSQIY KGIVSKPRSA AAVLKAHQLF LACCPFRKLS YFITNKTIRD
401: LVGNSPRVHV IDFGILYGFQ WPTLIHRFSI YGKPKVRVTG IEFPQPGFRP TQRVEETGER LAAYAKQFGV PFEYKAIAKK WDAVQLEDLD IDRDEITVVN
501: CLYRAENLHD ESVKVESCRD AVLSLIGKIN PDLFVFGIVN GAYNAPFFVT RFREALFHFS SIFDMLETIV PREDEERMFL EMEVFGREAL NVIACEGWER
601: VERPETYKQW HVRAMRSGLV QVPFDPDIMK TSLHKVNTFY HKDFVIDQDN RWLLQGWKGR TVMALSVWKP ESKA
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.