CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99969	Soybean	cytosol	74.66	73.95
KRH49113	Soybean	cytosol	73.84	73.43
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	60.0	61.78
PGSC0003DMT400049420	Potato	cytosol	53.15	58.43
GSMUA_Achr10P...	Banana	nucleus	33.7	55.66
PGSC0003DMT400022997	Potato	cytosol, plastid	57.81	55.45
Solyc09g010920.1.1	Tomato	cytosol	57.67	55.32
Solyc10g086530.1.1	Tomato	cytosol	55.89	53.61
GSMUA_Achr10P...	Banana	cytosol	43.42	52.92
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	48.22	52.3
CDY07777	Canola	cytosol, nucleus, peroxisome	48.08	52.15
CDX79750	Canola	peroxisome	48.08	52.08
GSMUA_Achr8P02550_001	Banana	nucleus	27.95	52.04
TraesCS1B01G037500.1	Wheat	cytosol	28.63	50.61
AT2G37650.1	Thale cress	cytosol	49.73	50.56
Zm00001d034664_P001	Maize	plastid	38.22	49.91
GSMUA_Achr7P15080_001	Banana	cytosol	40.68	49.67
GSMUA_Achr6P34090_001	Banana	nucleus	41.51	49.51
Zm00001d028603_P001	Maize	cytosol	48.77	48.5
Os03t0690600-03	Rice	cytosol	48.22	48.15
OQU92829	Sorghum	cytosol	48.36	48.09
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	41.64	47.8
KRH29773	Soybean	cytosol	40.14	47.72
KRH24780	Soybean	cytosol	43.01	47.58
KRH10240	Soybean	cytosol	38.63	46.53
KRH29774	Soybean	cytosol	39.73	45.96
KXG37250	Sorghum	cytosol	40.55	45.47
KRH29771	Soybean	cytosol	42.33	45.44
HORVU3Hr1G012520.1	Barley	cytosol	28.36	45.39
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	40.0	45.34
KRH24773	Soybean	nucleus	42.47	45.12
KRH23095	Soybean	cytosol	40.55	45.05
TraesCS5A01G481300.1	Wheat	cytosol	40.0	44.58
KXG38103	Sorghum	cytosol	38.22	44.57
TraesCS5D01G494900.1	Wheat	cytosol	39.73	44.14
KRH29775	Soybean	nucleus	40.68	44.13
KRH24775	Soybean	cytosol	41.1	44.12
TraesCS5B01G494500.1	Wheat	cytosol	39.59	43.99
KRH29779	Soybean	cytosol	44.52	43.8
KXG21079	Sorghum	cytosol	37.26	43.66
KRH23094	Soybean	cytosol	33.01	43.58
GSMUA_AchrUn_...	Banana	cytosol	39.32	43.55
Zm00001d011070_P001	Maize	cytosol	37.4	43.54
TraesCS5D01G152700.1	Wheat	cytosol, plastid	45.62	43.02
TraesCS5A01G139000.1	Wheat	cytosol, plastid	45.62	42.91
KXG21080	Sorghum	cytosol	36.71	42.81
Zm00001d035671_P001	Maize	cytosol	36.71	42.81
TraesCS5B01G138100.1	Wheat	cytosol, plastid	45.48	42.78
HORVU5Hr1G045020.29	Barley	cytosol	45.89	42.57
KRH24778	Soybean	nucleus	39.04	42.16
KRH10243	Soybean	nucleus	38.36	42.11
KRH23090	Soybean	vacuole	35.75	42.03
Zm00001d047813_P002	Maize	nucleus	47.53	41.86
KRH23089	Soybean	cytosol	36.58	41.46
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	42.05	41.32
KRH10241	Soybean	cytosol, nucleus, peroxisome	38.49	40.84
HORVU3Hr1G012550.6	Barley	cytosol	32.47	39.77
TraesCS1B01G037300.1	Wheat	cytosol	37.53	38.92
TraesCS1D01G030900.1	Wheat	cytosol	37.12	38.01
HORVU1Hr1G004440.1	Barley	cytosol	36.99	37.55
Zm00001d035670_P001	Maize	cytosol	37.26	37.47
TraesCS1D01G030800.1	Wheat	cytosol	35.89	37.38
TraesCS1D01G031000.1	Wheat	cytosol	36.99	37.24
TraesCS1A01G030200.1	Wheat	cytosol	36.71	37.17
EES18882	Sorghum	cytosol	36.99	36.83
TraesCS1A01G030300.1	Wheat	cytosol	35.62	36.83
TraesCS3D01G067900.1	Wheat	nucleus	34.66	36.67
TraesCS1B01G037400.1	Wheat	cytosol	36.03	36.38
TraesCS1D01G031200.1	Wheat	cytosol	36.03	36.08
OQU91407	Sorghum	nucleus	33.7	35.86
TraesCS3B01G081100.1	Wheat	nucleus	34.66	35.38
EES18880	Sorghum	cytosol	35.89	35.36
TraesCS3A01G068000.1	Wheat	nucleus	34.66	35.34
TraesCS3D01G067700.1	Wheat	cytosol	34.93	35.32
Zm00001d033166_P001	Maize	nucleus	35.34	35.25
TraesCS3B01G080900.1	Wheat	nucleus	34.38	34.81
TraesCS3A01G067900.1	Wheat	cytosol	34.38	34.76
EER91260	Sorghum	nucleus	34.25	34.67
TraesCS3B01G081000.1	Wheat	cytosol	34.38	34.48
TraesCS1B01G037200.1	Wheat	nucleus	35.34	34.08
TraesCS3D01G067800.1	Wheat	nucleus	31.51	34.02
OQU91406	Sorghum	nucleus	34.79	33.96
KXG38064	Sorghum	nucleus	33.42	33.89
KRH74015	Soybean	cytosol	20.68	27.91
KRH14104	Soybean	cytosol	20.68	27.71
KRH73868	Soybean	cytosol	20.55	27.52
KRG98562	Soybean	nucleus	20.27	27.16
KRH14274	Soybean	cytosol	20.27	27.16
KRH46306	Soybean	cytosol	20.0	26.79
KRH01979	Soybean	cytosol	19.86	26.61
KRH51175	Soybean	cytosol	19.32	26.01
KRH36572	Soybean	cytosol	18.9	25.18
KRH11548	Soybean	nucleus	19.04	25.18
KRH38269	Soybean	cytosol	12.05	24.93
KRH27129	Soybean	plastid	18.63	24.24
KRH22210	Soybean	cytosol, plastid	18.49	23.4
KRH25905	Soybean	cytosol, plastid	17.95	23.06
KRH55599	Soybean	plastid	17.81	22.89
KRH53364	Soybean	cytosol	18.49	22.5
KRH64568	Soybean	cytosol	18.22	22.32
KRH18097	Soybean	cytosol	17.81	22.0
KRH15917	Soybean	cytosol	17.67	21.83
KRG91573	Soybean	plastid	15.48	19.02
KRH35251	Soybean	plastid	15.34	18.98
KRH38397	Soybean	plastid	11.78	15.93
KRH08880	Soybean	plastid	13.97	15.53

Protein Annotations

EntrezGene:100780785	MapMan:15.5.12	EMBL:ACUP02001634	EnsemblPlantsGene:GLYMA_03G065700	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1JLK0	InterPro:IPR005202	ProteinID:KRH65838.1
EnsemblPlants:KRH65839	ProteinID:KRH65839	ProteinID:KRH65839.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636
PANTHER:PTHR31636:SF44	InterPro:TF_GRAS	UniParc:UPI00023C11EF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:11896538..11909845

Molecular Weight (calculated)

82389.9 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.526

Length

730 amino acids

Sequence
(BLAST)

001: MTMNPHLTGF SGSTNQSFPI LQNQRFDNGP RFENLFFDQS RNFDLQCDPN LIPANTPSSS TVTHEEHSPE DCDFSDAVLS YISQILMEED LEDNTCMVQD
101: SLDIQAAEKS FYEVLGEKYP PSPRNTSLMN DGVGGYDFSG DYGNCPDTNG DLMSIFTNQF LPPNSGSFPA HSLHGDGISH SSYNPSNSVE GLVNSSKSII
201: QVPDLNSESE SIWQFQKGVE EASKFLPSAN GLFANLSEPE PKEGKDELSF KVEKEEGEYV NGGSKGRKHP QIDEADDEEN RSSKQAAIYS EPTLRSDMAD
301: IILLHSTGDG KDHFVARREA LQNKTQKSVL PKGQSKASSS GKGRGKKQGG RKEVVDLRTL LFLCAQAVAA DDHRNANELL KHIRQHSTPF GDGNQRLAHI
401: FADGLEARLA GTGSQIYKGL VGKRTSAANY LKAYHLYLAA CPFRKISKFT SNITIRESSA QSMKVHVIDF GIFYGFQWPT FIQRLSWRAG GPPKLRITGI
501: DFPQPGFRPA ERILETGRRL AAYAEAFNVP FEYKAIAKKW DTIQLEELEI DRDEFLVVTC FYRGKNLLDE SVVVDSPRNN FLTLIRRINP KLFIHGIMNG
601: AFDAPFFVTR FREALFHYSS LFDMLETIVP REDWERMLIE KEIFGREALN VIACEGPERV ERPESYKQWQ ARILRAGFVQ QSFDRRTVKM AMEKVRGSYH
701: KDFVIDEDSQ WLLQGWKGRI IYALSCWRPA

Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)

001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA

Arabidopsis Description

SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.