CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29774	Soybean	cytosol	71.62	77.18
KRH29773	Soybean	cytosol	67.65	74.92
KRH29775	Soybean	nucleus	73.68	74.44
KRH24778	Soybean	nucleus	71.03	71.45
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	59.56	54.51
KRH10241	Soybean	cytosol, nucleus, peroxisome	54.71	54.07
PGSC0003DMT400005480	Potato	cytosol	35.15	49.08
KRH24780	Soybean	cytosol	46.18	47.58
GSMUA_Achr10P...	Banana	nucleus	30.59	47.06
Bra015584.1-P	Field mustard	cytosol	29.12	45.41
CDY47877	Canola	nucleus	40.44	44.5
Solyc06g076280.1.1	Tomato	cytosol	48.82	44.38
CDY39530	Canola	cytosol	40.29	44.26
Bra028391.1-P	Field mustard	nucleus	40.29	44.19
PGSC0003DMT400077972	Potato	cytosol	48.82	44.15
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	40.74	43.97
GSMUA_Achr10P...	Banana	cytosol	38.68	43.91
Zm00001d034664_P001	Maize	plastid	35.88	43.65
TraesCS1B01G037500.1	Wheat	cytosol	26.47	43.58
CDY06266	Canola	cytosol	40.44	43.51
KRH10243	Soybean	nucleus	42.35	43.31
GSMUA_Achr8P02550_001	Banana	nucleus	24.85	43.11
KRH29779	Soybean	cytosol	46.76	42.86
Bra031581.1-P	Field mustard	cytosol	41.62	42.37
KRH23089	Soybean	cytosol	39.85	42.08
KRH23090	Soybean	vacuole	38.38	42.03
HORVU3Hr1G012520.1	Barley	cytosol	28.09	41.89
KRH10240	Soybean	cytosol	37.21	41.75
KRH49113	Soybean	cytosol	45.0	41.69
GSMUA_Achr6P34090_001	Banana	nucleus	37.5	41.67
AT1G07520.3	Thale cress	cytosol	42.5	41.52
KRG99969	Soybean	cytosol	45.0	41.52
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	38.68	41.35
KXG38103	Sorghum	cytosol	37.94	41.21
KRH65839	Soybean	cytosol, plastid	44.12	41.1
KXG37250	Sorghum	cytosol	39.12	40.86
CDY06265	Canola	cytosol	41.32	40.72
GSMUA_Achr7P15080_001	Banana	cytosol	35.74	40.64
KRH29771	Soybean	cytosol	40.44	40.44
Bra031580.1-P	Field mustard	cytosol	41.03	40.43
CDY09912	Canola	cytosol	41.47	40.29
KRH23094	Soybean	cytosol	32.65	40.14
KRH24773	Soybean	nucleus	40.44	40.03
KXG21079	Sorghum	cytosol	36.62	39.97
Os03t0690600-03	Rice	cytosol	42.94	39.95
Zm00001d035671_P001	Maize	cytosol	36.62	39.78
Zm00001d028603_P001	Maize	cytosol	42.79	39.65
OQU92829	Sorghum	cytosol	42.5	39.37
KRH23095	Soybean	cytosol	37.94	39.27
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	37.06	39.13
TraesCS5B01G494500.1	Wheat	cytosol	37.79	39.12
TraesCS5D01G494900.1	Wheat	cytosol	37.79	39.12
TraesCS5A01G481300.1	Wheat	cytosol	37.65	39.08
Zm00001d011070_P001	Maize	cytosol	35.44	38.44
KXG21080	Sorghum	cytosol	35.29	38.34
TraesCS5D01G152700.1	Wheat	cytosol, plastid	42.35	37.21
TraesCS5A01G139000.1	Wheat	cytosol, plastid	42.21	36.98
TraesCS5B01G138100.1	Wheat	cytosol, plastid	42.21	36.98
CDY09911	Canola	nucleus	31.47	36.64
HORVU5Hr1G045020.29	Barley	cytosol	42.21	36.47
GSMUA_AchrUn_...	Banana	cytosol	34.85	35.96
HORVU3Hr1G012550.6	Barley	cytosol	30.74	35.07
Zm00001d047813_P002	Maize	nucleus	42.65	34.98
Zm00001d035670_P001	Maize	cytosol	36.18	33.88
TraesCS1D01G031000.1	Wheat	cytosol	35.74	33.52
TraesCS1B01G037300.1	Wheat	cytosol	34.56	33.38
TraesCS1D01G030800.1	Wheat	cytosol	34.26	33.24
EES18882	Sorghum	cytosol	35.44	32.88
TraesCS1A01G030300.1	Wheat	cytosol	33.97	32.72
TraesCS1D01G030900.1	Wheat	cytosol	34.26	32.68
HORVU1Hr1G004440.1	Barley	cytosol	34.41	32.55
EES18880	Sorghum	cytosol	35.29	32.39
TraesCS3D01G067900.1	Wheat	nucleus	32.65	32.17
TraesCS1B01G037400.1	Wheat	cytosol	34.12	32.09
TraesCS1D01G031200.1	Wheat	cytosol	34.12	31.82
OQU91407	Sorghum	nucleus	32.06	31.78
TraesCS3B01G081100.1	Wheat	nucleus	32.65	31.05
TraesCS3A01G068000.1	Wheat	nucleus	32.65	31.01
KXG38064	Sorghum	nucleus	32.79	30.97
TraesCS1A01G030200.1	Wheat	cytosol	32.79	30.93
Zm00001d033166_P001	Maize	nucleus	33.24	30.87
EER91260	Sorghum	nucleus	32.5	30.65
TraesCS3D01G067700.1	Wheat	cytosol	32.35	30.47
TraesCS3A01G067900.1	Wheat	cytosol	31.91	30.06
TraesCS3B01G081000.1	Wheat	cytosol	32.06	29.95
TraesCS3D01G067800.1	Wheat	nucleus	29.71	29.88
OQU91406	Sorghum	nucleus	32.79	29.81
TraesCS1B01G037200.1	Wheat	nucleus	33.09	29.72
TraesCS3B01G080900.1	Wheat	nucleus	31.47	29.68
KRH73868	Soybean	cytosol	21.76	27.16
KRG98562	Soybean	nucleus	21.32	26.61
KRH14274	Soybean	cytosol	21.32	26.61
KRH46306	Soybean	cytosol	21.32	26.61
KRH27129	Soybean	plastid	21.62	26.2
KRH14104	Soybean	cytosol	20.88	26.05
KRH74015	Soybean	cytosol	20.59	25.88
KRH01979	Soybean	cytosol	20.44	25.5
KRH22210	Soybean	cytosol, plastid	21.62	25.48
KRH55599	Soybean	plastid	21.18	25.35
KRH51175	Soybean	cytosol	19.85	24.91
KRH36572	Soybean	cytosol	20.0	24.82
KRH25905	Soybean	cytosol, plastid	20.59	24.65
KRH11548	Soybean	nucleus	20.0	24.64
KRH15917	Soybean	cytosol	19.71	22.67
KRH38269	Soybean	cytosol	11.76	22.66
KRH18097	Soybean	cytosol	19.56	22.5
KRH53364	Soybean	cytosol	19.56	22.17
KRH64568	Soybean	cytosol	19.41	22.15
KRH35251	Soybean	plastid	15.29	17.63
KRG91573	Soybean	plastid	15.29	17.51
KRH38397	Soybean	plastid	12.65	15.93
KRH08880	Soybean	plastid	15.15	15.68

Protein Annotations

EntrezGene:100809160	MapMan:15.5.12	EMBL:ACUP02007185	EnsemblPlantsGene:GLYMA_12G062000	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1LQP3	InterPro:IPR005202	EnsemblPlants:KRH24775
ProteinID:KRH24775	ProteinID:KRH24775.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF129
InterPro:TF_GRAS	UniParc:UPI000233D2E5	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:4523959..4526001

Molecular Weight (calculated)

77295.0 Da

IEP (calculated)

5.302

GRAVY (calculated)

-0.534

Length

680 amino acids

Sequence
(BLAST)

001: MEANFPRRAH QFGEEEESIL YVSDSLGFAA TDPSLRDPSL EDNDFSETAK FINQILMEDN VEQMPFYDSL NLQVTEKSFY NALTGNIPLS PNQHPLVLSP
101: QAETTPTTSN SSNNSNHNFL DENSRELNPS PDSVSVLAFQ FNPNSLSQPP SVTVNHGLSN LDSSTAKLLA HNIFNDADSL SQFRRGLEEA TRFLPPGPKL
201: VAGLDSKGEE PINTLGENSY GSKGRKNHER EDIDTREEEE RRSNKQSALS LVDESDLSDA FDRVVLLSVE NVCNEHCSLQ SETVKAVEPG GVKGRPKNQA
301: TNKETVDLRN LLMMCSQSVY ANDKRAANEL LEQIRQHSSP SGDALQRLAH YFANGLEARL VGEGMFSFLK SKRSTAAEFL KAHQDFLSVS PFKKFTYFFA
401: NKMIMKAAVK AETVHIIDFG IQYGFQWPML IKFLSNREGG PPKLRITGID FPQPGFRPTE KIEETGCRLA NYSKRYSIPF EYNAIASRNW ETIQVEALNI
501: ETNELVAVNS LMKFENLMDE TIEVDSPRNA VLHLIRKINP HIFTQCIVNG TYNAPFFTTR FREALFHFST IYDLCDTVIP RENEWRMLIE REVLGREAMN
601: VIACEGSERV ERPETYKQWQ ARNMKAGFKQ LPLNEELLAK FRNELRKSYH RDFVLDEDKN WMLQGWKGRI LYASTCWVPA

Best Arabidopsis Sequence Match ( AT1G07520.1 )
(BLAST)

001: MESNYSGVVN GYDVSFLPTS IPDLGFGVPS SSDFDLRMDQ YYHQPSIWVP DQDHHFSPPA DEIDSENTLL KYVNQLLMEE SLAEKQSIFY DSLALRQTEE
101: MLQQVISDSQ TQSSIPNNSI TTSSSSNSGD YSNSSNSSVR IENEVLFDNK HLGDSGVVSF PGSNMLRGGE QFGQPANEIL VRSMFSDAES VLQFKRGLEE
201: ASKFLPNTDQ WIFNLEPEME RVVPVKVEEG WSAISKTRKN HHEREEEEDD LEEARRRSKQ FAVNEEDGKL TEMFDKVLLL DGECDPQIIE DGENGSSKAL
301: VKKGRAKKKS RAVDFRTLLT LCAQSVSAGD KITADDLLRQ IRKQCSPVGD ASQRLAHFFA NALEARLEGS TGTMIQSYYD SISSKKRTAA QILKSYSVFL
401: SASPFMTLIY FFSNKMILDA AKDASVLHIV DFGILYGFQW PMFIQHLSKS NPGLRKLRIT GIEIPQHGLR PTERIQDTGR RLTEYCKRFG VPFEYNAIAS
501: KNWETIKMEE FKIRPNEVLA VNAVLRFKNL RDVIPGEEDC PRDGFLKLIR DMNPNVFLSS TVNGSFNAPF FTTRFKEALF HYSALFDLFG ATLSKENPER
601: IHFEGEFYGR EVMNVIACEG VDRVERPETY KQWQVRMIRA GFKQKPVEAE LVQLFREKMK KWGYHKDFVL DEDSNWFLQG WKGRILFSSS CWVPS

Arabidopsis Description

GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.