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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06265 Canola cytosol 99.28 99.28
Bra031581.1-P Field mustard cytosol 78.41 80.99
AT1G07520.3 Thale cress cytosol 78.26 77.59
Bra015584.1-P Field mustard cytosol 47.39 75.0
Bra028391.1-P Field mustard nucleus 57.39 63.87
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 22.46 48.9
KRH29773 Soybean cytosol 40.58 45.6
PGSC0003DMT400005480 Potato cytosol 32.03 45.38
KRH29774 Soybean cytosol 40.14 43.9
KRH24778 Soybean nucleus 41.59 42.46
KRH29775 Soybean nucleus 41.01 42.05
KRH23091 Soybean endoplasmic reticulum, plasma membrane 44.78 41.59
KRH24775 Soybean cytosol 40.43 41.03
HORVU3Hr1G012520.1 Barley cytosol 26.67 40.35
GSMUA_Achr10P... Banana nucleus 25.8 40.27
KRH10241 Soybean cytosol, nucleus, peroxisome 40.14 40.26
Solyc06g076280.1.1 Tomato cytosol 43.62 40.24
PGSC0003DMT400077972 Potato cytosol 43.33 39.76
Bra033813.1-P Field mustard nucleus 32.75 38.83
Bra030688.1-P Field mustard nucleus 41.3 38.36
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 35.07 38.05
GSMUA_Achr10P... Banana cytosol 32.9 37.9
TraesCS1B01G037500.1 Wheat cytosol 22.61 37.77
Bra028390.1-P Field mustard cytosol 38.41 37.54
KXG21080 Sorghum cytosol 33.77 37.22
Zm00001d034664_P001 Maize plastid 29.86 36.85
Zm00001d011070_P001 Maize cytosol 32.9 36.2
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 33.62 36.02
KXG38103 Sorghum cytosol 32.46 35.78
TraesCS5A01G481300.1 Wheat cytosol 33.77 35.57
TraesCS5B01G494500.1 Wheat cytosol 33.77 35.46
TraesCS5D01G494900.1 Wheat cytosol 33.62 35.31
GSMUA_Achr6P34090_001 Banana nucleus 31.3 35.29
GSMUA_Achr7P15080_001 Banana cytosol 30.58 35.28
Os03t0690600-03 Rice cytosol 36.96 34.88
Zm00001d028603_P001 Maize cytosol 37.1 34.88
KXG21079 Sorghum cytosol 31.45 34.83
Bra035653.1-P Field mustard cytosol 36.38 34.76
OQU92829 Sorghum cytosol 36.81 34.6
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 33.62 34.47
Zm00001d035671_P001 Maize cytosol 31.16 34.34
HORVU3Hr1G012550.6 Barley cytosol 29.42 34.06
KXG37250 Sorghum cytosol 31.88 33.79
GSMUA_Achr8P02550_001 Banana nucleus 18.7 32.91
Bra026077.1-P Field mustard cytosol 13.48 31.63
TraesCS5B01G138100.1 Wheat cytosol, plastid 35.51 31.57
TraesCS5A01G139000.1 Wheat cytosol, plastid 35.51 31.57
TraesCS5D01G152700.1 Wheat cytosol, plastid 35.36 31.52
TraesCS3D01G067900.1 Wheat nucleus 31.45 31.45
HORVU5Hr1G045020.29 Barley cytosol 35.65 31.26
Zm00001d047813_P002 Maize nucleus 36.67 30.52
OQU91407 Sorghum nucleus 30.0 30.17
TraesCS3B01G081100.1 Wheat nucleus 31.16 30.07
TraesCS3A01G068000.1 Wheat nucleus 31.16 30.03
EER91260 Sorghum nucleus 31.3 29.96
KXG38064 Sorghum nucleus 31.16 29.86
TraesCS1D01G030800.1 Wheat cytosol 30.29 29.81
TraesCS3D01G067700.1 Wheat cytosol 31.01 29.64
TraesCS1A01G030300.1 Wheat cytosol 30.29 29.6
TraesCS1D01G030900.1 Wheat cytosol 30.58 29.59
GSMUA_AchrUn_... Banana cytosol 28.26 29.59
Zm00001d035670_P001 Maize cytosol 31.01 29.48
TraesCS3B01G080900.1 Wheat nucleus 30.72 29.4
HORVU1Hr1G004440.1 Barley cytosol 30.58 29.35
OQU91406 Sorghum nucleus 31.74 29.28
TraesCS1B01G037300.1 Wheat cytosol 29.86 29.26
Bra015156.1-P Field mustard cytosol 13.48 29.25
EES18882 Sorghum cytosol 31.01 29.2
Zm00001d033166_P001 Maize nucleus 30.87 29.1
TraesCS1B01G037400.1 Wheat cytosol 30.43 29.05
TraesCS3A01G067900.1 Wheat cytosol 30.29 28.95
TraesCS3D01G067800.1 Wheat nucleus 28.12 28.7
TraesCS1D01G031000.1 Wheat cytosol 30.0 28.55
TraesCS3B01G081000.1 Wheat cytosol 30.0 28.43
TraesCS1A01G030200.1 Wheat cytosol 29.71 28.43
EES18880 Sorghum cytosol 30.14 28.07
TraesCS1D01G031200.1 Wheat cytosol 29.57 27.98
TraesCS1B01G037200.1 Wheat nucleus 29.13 26.55
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 15.51 26.23
Bra018860.1-P Field mustard nucleus 19.13 25.14
Bra020715.1-P Field mustard cytosol, plastid 17.68 24.55
Bra036185.1-P Field mustard cytosol 17.54 24.44
Bra026237.1-P Field mustard plastid 17.97 23.18
Bra021063.1-P Field mustard plastid 17.68 23.02
Bra012280.1-P Field mustard cytosol 17.83 22.4
Bra028312.1-P Field mustard cytosol 14.49 22.03
Bra022596.1-P Field mustard plastid 15.8 18.83
Protein Annotations
EnsemblPlants:Bra031580.1EnsemblPlants:Bra031580.1-PEnsemblPlantsGene:Bra031580GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF129PFAM:PF03514PFscan:PS50985SEG:segUniParc:UPI00025433DD
UniProt:M4ES02MapMan:15.5.12::::
Description
AT1G07520 (E=2e-283) | scarecrow transcription factor family protein
Coordinates
chrA09:+:35724367..35726439
Molecular Weight (calculated)
78753.8 Da
IEP (calculated)
6.191
GRAVY (calculated)
-0.578
Length
690 amino acids
Sequence
(BLAST)
001: MMESNFYRIV NGHEYYDVSF LPNQIPDLGF GVPSSSDFDL RLDHHHHHQQ PSYWIPSTQQ DQDSPPGADE IDSENTLLKY VNQLLMEETL SENQSMSYDD
101: ALALRQTEEM LQQVINDSLA QSSNSITSST SSGSSGGGEY LNSNSNSCVR IETEANSTES EALSDNHPHH ILGSNMLSGY GQPANEILVR SMFSDADSVN
201: QFKRGLEEAS KFLPNTDQWI FNPQHEVISV KDEKGFSRVR KHHHQEPEEE EARRSKQSAV NVDDGNITEL FDKVLLLDNQ LDPQIKEETN NVSSKKEGGR
301: GKKKSKAVDF RTLLTLCAQS ISSGDKLAAD DLLNQIKKQC SPLGDASQRL AYFFTKALEA RLQGSSGVMI QSYYDSITSK KRTAAQILKT YKAFLSASPF
401: MTLIYFFSNK MILDASKDAS VLHIIDFGIL YGFQWPMFIQ YISKSKIGPR KLRITGVELP QNGFRPTEKI EDTGRRLREY CKRFGVPFKY NAIASKNWET
501: IRLEEFKIRP NEVLAVNSVL RLKNLRDVTP GEEDCPRDGF LKLIRDMKPD VFLSSTINGS FNAPFFATRF KEALFHYSSL FDMFGSTLSK ENPERMHFEG
601: EFFGREVMNV IACEGVDRVE RPETYKQWQV RMMRAGFKQK PVETELVESF REKMKRCGYH KDFVLDEDSN WFLQGWKGRI LFSSSCWVPS
Best Arabidopsis Sequence Match ( AT1G07520.3 )
(BLAST)
001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS
Arabidopsis Description
GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.