CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	91.57	84.79
KRH29775	Soybean	nucleus	57.56	58.84
KRH29773	Soybean	cytosol	52.47	58.79
KRH29774	Soybean	cytosol	53.49	58.32
KRH24775	Soybean	cytosol	54.07	54.71
KRH24778	Soybean	nucleus	52.03	52.96
KRH24780	Soybean	cytosol	46.8	48.79
PGSC0003DMT400005480	Potato	cytosol	34.16	48.25
GSMUA_Achr10P...	Banana	nucleus	29.36	45.7
CDY47877	Canola	nucleus	40.55	45.15
CDY39530	Canola	cytosol	40.55	45.07
KRH29779	Soybean	cytosol	48.55	45.01
Bra028391.1-P	Field mustard	nucleus	40.41	44.84
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	40.84	44.6
Solyc06g076280.1.1	Tomato	cytosol	47.67	43.85
Bra015584.1-P	Field mustard	cytosol	27.47	43.35
PGSC0003DMT400077972	Potato	cytosol	47.24	43.22
TraesCS1B01G037500.1	Wheat	cytosol	25.29	42.13
KRH10240	Soybean	cytosol	36.63	41.58
KRH29771	Soybean	cytosol	40.99	41.47
KRH10243	Soybean	nucleus	39.97	41.35
KRH24773	Soybean	nucleus	41.28	41.34
KRG99969	Soybean	cytosol	44.19	41.25
HORVU3Hr1G012520.1	Barley	cytosol	27.33	41.23
CDY06266	Canola	cytosol	37.79	41.14
KRH49113	Soybean	cytosol	43.75	41.01
GSMUA_Achr10P...	Banana	cytosol	35.61	40.9
AT1G07520.3	Thale cress	cytosol	41.28	40.8
GSMUA_Achr7P15080_001	Banana	cytosol	35.32	40.64
CDY06265	Canola	cytosol	40.55	40.43
Zm00001d034664_P001	Maize	plastid	32.7	40.25
Bra031580.1-P	Field mustard	cytosol	40.26	40.14
Bra031581.1-P	Field mustard	cytosol	38.95	40.12
Os04t0590400-01	Rice	cytosol, nucleus, peroxisome	37.06	40.09
KRH23090	Soybean	vacuole	36.05	39.94
KRH23089	Soybean	cytosol	37.35	39.91
KRH23095	Soybean	cytosol	38.08	39.88
GSMUA_Achr8P02550_001	Banana	nucleus	22.67	39.8
CDY09912	Canola	cytosol	40.41	39.71
GSMUA_Achr6P34090_001	Banana	nucleus	34.74	39.05
KRH65839	Soybean	cytosol, plastid	40.84	38.49
KXG37250	Sorghum	cytosol	36.34	38.4
Zm00001d011070_P001	Maize	cytosol	34.74	38.12
KRH23094	Soybean	cytosol	30.38	37.79
KXG21080	Sorghum	cytosol	34.01	37.38
OQU92829	Sorghum	cytosol	39.83	37.33
Zm00001d028603_P001	Maize	cytosol	39.39	36.92
KXG38103	Sorghum	cytosol	33.43	36.74
KXG21079	Sorghum	cytosol	32.99	36.44
TraesCS5B01G494500.1	Wheat	cytosol	34.59	36.23
TraesCS5D01G494900.1	Wheat	cytosol	34.59	36.23
Os03t0690600-03	Rice	cytosol	38.37	36.11
TraesCS5A01G481300.1	Wheat	cytosol	34.3	36.03
HORVU5Hr1G113620.1	Barley	cytosol, nucleus, peroxisome	33.72	36.02
CDY09911	Canola	nucleus	30.52	35.96
Zm00001d035671_P001	Maize	cytosol	31.83	34.98
TraesCS5D01G152700.1	Wheat	cytosol, plastid	38.52	34.24
GSMUA_AchrUn_...	Banana	cytosol	32.7	34.14
HORVU3Hr1G012550.6	Barley	cytosol	29.51	34.06
HORVU5Hr1G045020.29	Barley	cytosol	38.81	33.93
TraesCS5A01G139000.1	Wheat	cytosol, plastid	38.23	33.89
TraesCS5B01G138100.1	Wheat	cytosol, plastid	38.23	33.89
TraesCS1D01G030900.1	Wheat	cytosol	34.3	33.1
TraesCS1B01G037300.1	Wheat	cytosol	33.72	32.95
Zm00001d047813_P002	Maize	nucleus	38.81	32.21
TraesCS1D01G031000.1	Wheat	cytosol	33.72	32.0
TraesCS1D01G030800.1	Wheat	cytosol	32.56	31.95
TraesCS1A01G030300.1	Wheat	cytosol	32.12	31.3
TraesCS3D01G067800.1	Wheat	nucleus	30.67	31.21
TraesCS3D01G067900.1	Wheat	nucleus	31.25	31.16
Zm00001d035670_P001	Maize	cytosol	32.85	31.13
TraesCS1B01G037400.1	Wheat	cytosol	32.7	31.12
EER91260	Sorghum	nucleus	32.56	31.07
HORVU1Hr1G004440.1	Barley	cytosol	32.41	31.02
KXG38064	Sorghum	nucleus	32.41	30.97
OQU91407	Sorghum	nucleus	30.81	30.9
TraesCS1D01G031200.1	Wheat	cytosol	32.7	30.86
EES18882	Sorghum	cytosol	32.85	30.83
TraesCS1A01G030200.1	Wheat	cytosol	31.83	30.37
TraesCS3B01G081100.1	Wheat	nucleus	31.54	30.35
TraesCS3A01G068000.1	Wheat	nucleus	31.54	30.31
EES18880	Sorghum	cytosol	32.41	30.09
Zm00001d033166_P001	Maize	nucleus	31.69	29.78
TraesCS1B01G037200.1	Wheat	nucleus	32.7	29.72
TraesCS3A01G067900.1	Wheat	cytosol	31.1	29.64
TraesCS3B01G081000.1	Wheat	cytosol	31.25	29.53
TraesCS3D01G067700.1	Wheat	cytosol	30.96	29.5
OQU91406	Sorghum	nucleus	31.98	29.41
TraesCS3B01G080900.1	Wheat	nucleus	30.81	29.4
KRG98562	Soybean	nucleus	19.77	24.95
KRH01979	Soybean	cytosol	19.62	24.77
KRH14104	Soybean	cytosol	19.62	24.77
KRH46306	Soybean	cytosol	19.62	24.77
KRH73868	Soybean	cytosol	19.62	24.77
KRH74015	Soybean	cytosol	19.48	24.77
KRH14274	Soybean	cytosol	19.33	24.4
KRH51175	Soybean	cytosol	19.19	24.35
KRH11548	Soybean	nucleus	19.33	24.09
KRH36572	Soybean	cytosol	19.19	24.09
KRH27129	Soybean	plastid	18.46	22.64
KRH22210	Soybean	cytosol, plastid	18.9	22.53
KRH64568	Soybean	cytosol	19.48	22.48
KRH25905	Soybean	cytosol, plastid	18.46	22.36
KRH55599	Soybean	plastid	18.46	22.36
KRH53364	Soybean	cytosol	19.48	22.33
KRH38269	Soybean	cytosol	11.34	22.1
KRH18097	Soybean	cytosol	18.02	20.98
KRH15917	Soybean	cytosol	17.73	20.64
KRG91573	Soybean	plastid	16.42	19.02
KRH35251	Soybean	plastid	15.99	18.64
KRH38397	Soybean	plastid	12.5	15.93
KRH08880	Soybean	plastid	14.83	15.53

Protein Annotations

MapMan:15.5.12	UniProt:A0A0R0FVT7	EMBL:ACUP02009127	EnsemblPlantsGene:GLYMA_15G037100	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR005202	EnsemblPlants:KRH10241	ProteinID:KRH10241
ProteinID:KRH10241.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF129	InterPro:TF_GRAS
UniParc:UPI0006ED9155	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:2922134..2925324

Molecular Weight (calculated)

77102.2 Da

IEP (calculated)

5.687

GRAVY (calculated)

-0.416

Length

688 amino acids

Sequence
(BLAST)

001: MDPNFIISGN DFDESKQWDL NGHYTNLLND PLSDVGPLGF SHNSILNSEP FVSSSASAAA ASSSTATVAD PSPEEDTDFS ETFKFISQIL LEENFEQKPC
101: MCYDPLTLQH TEKSFYEALE LEPSLLLSPN QHPLESPDGN SSNSTTDSAN SHDLKPSSPN TPASDALHSS SHAPSLVVPP HALTKINDGT VDLDSSVTKL
201: LAENIFSDAD SMLQFKRGLE EASKFLPQGP QLFTGLESPT VSSEPKGRGV ALKMENSFGV KNRKNHARQD DEEERSNKQS AVSAVCVEEE SEISEIFDRV
301: LLSVENVPLC AENNGSVAVG DSNTKLIEKS SLSDGGKVRS KRQGRKKETV DLRTLLVLCA QAVSSSDNRT ANELLKQIRQ HSSALGDASQ RLAHYVANAL
401: EARLVGDGTA TQIFYMSYKK FTTTDFLKAY QVLISACPFK KFAHFFANKM IMKTADGAET LHIIDFGILY GFQWPILIKF LSGRRGGPPK LRITGIEYPQ
501: PGFRPTERIE ETGCRLAKYC KRFNVPFEYK AIASRNWETI QIEDLKIERN EVLAVNCLVR FKNLLDESIE VNSPRKAVMN LIRKMKPDIF VHCVVNGTYN
601: APFFLTRFRE ALFHYSSMYD MFDTLVSREN EWRLMLEREF LGREIMNVVA CEALERVERP ETYKQWQARN TRAGFKQLPL DKEIMTKI

Best Arabidopsis Sequence Match ( AT1G07520.3 )
(BLAST)

001: MMESNYSGVV NGYDVSFLPT SIPDLGFGVP SSSDFDLRMD QYYHQPSIWV PDQDHHFSPP ADEIDSENTL LKYVNQLLME ESLAEKQSIF YDSLALRQTE
101: EMLQQVISDS QTQSSIPNNS ITTSSSSNSG DYSNSSNSSV RIENEVLFDN KHLGDSGVVS FPGSNMLRGG EQFGQPANEI LVRSMFSDAE SVLQFKRGLE
201: EASKFLPNTD QWIFNLEPEM ERVVPVKVEE GWSAISKTRK NHHEREEEED DLEEARRRSK QFAVNEEDGK LTEMFDKVLL LDGECDPQII EDGENGSSKA
301: LVKKGRAKKK SRAVDFRTLL TLCAQSVSAG DKITADDLLR QIRKQCSPVG DASQRLAHFF ANALEARLEG STGTMIQSYY DSISSKKRTA AQILKSYSVF
401: LSASPFMTLI YFFSNKMILD AAKDASVLHI VDFGILYGFQ WPMFIQHLSK SNPGLRKLRI TGIEIPQHGL RPTERIQDTG RRLTEYCKRF GVPFEYNAIA
501: SKNWETIKME EFKIRPNEVL AVNAVLRFKN LRDVIPGEED CPRDGFLKLI RDMNPNVFLS STVNGSFNAP FFTTRFKEAL FHYSALFDLF GATLSKENPE
601: RIHFEGEFYG REVMNVIACE GVDRVERPET YKQWQVRMIR AGFKQKPVEA ELVQLFREKM KKWGYHKDFV LDEDSNWFLQ GWKGRILFSS SCWVPS

Arabidopsis Description

GRAS family transcription factor [Source:TAIR;Acc:AT1G07520]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.