Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 2
- endoplasmic reticulum 2
- vacuole 2
- nucleus 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY47877 | Canola | nucleus | 99.35 | 99.68 |
AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 78.87 | 77.62 |
Bra015584.1-P | Field mustard | cytosol | 42.26 | 60.09 |
Bra031580.1-P | Field mustard | cytosol | 63.87 | 57.39 |
Bra031581.1-P | Field mustard | cytosol | 61.61 | 57.19 |
Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 25.32 | 49.53 |
PGSC0003DMT400005480 | Potato | cytosol | 38.06 | 48.46 |
KRH29773 | Soybean | cytosol | 43.87 | 44.3 |
HORVU3Hr1G012520.1 | Barley | cytosol | 31.94 | 43.42 |
GSMUA_Achr10P... | Banana | nucleus | 30.65 | 42.99 |
KRH29775 | Soybean | nucleus | 46.13 | 42.5 |
KRH24778 | Soybean | nucleus | 45.97 | 42.16 |
KRH29774 | Soybean | cytosol | 42.74 | 42.0 |
KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 49.19 | 41.05 |
Solyc06g076280.1.1 | Tomato | cytosol | 49.52 | 41.04 |
TraesCS1B01G037500.1 | Wheat | cytosol | 27.26 | 40.92 |
PGSC0003DMT400077972 | Potato | cytosol | 49.19 | 40.56 |
KRH10241 | Soybean | cytosol, nucleus, peroxisome | 44.84 | 40.41 |
KRH24775 | Soybean | cytosol | 44.19 | 40.29 |
GSMUA_Achr10P... | Banana | cytosol | 38.06 | 39.4 |
Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 39.52 | 38.52 |
Bra033813.1-P | Field mustard | nucleus | 35.97 | 38.32 |
Bra028390.1-P | Field mustard | cytosol | 43.55 | 38.24 |
KXG38103 | Sorghum | cytosol | 38.55 | 38.18 |
Zm00001d034664_P001 | Maize | plastid | 34.35 | 38.1 |
Bra030688.1-P | Field mustard | nucleus | 45.65 | 38.09 |
GSMUA_Achr7P15080_001 | Banana | cytosol | 36.13 | 37.46 |
KXG21080 | Sorghum | cytosol | 37.74 | 37.38 |
Zm00001d011070_P001 | Maize | cytosol | 37.74 | 37.32 |
GSMUA_Achr8P02550_001 | Banana | nucleus | 23.39 | 36.99 |
KXG21079 | Sorghum | cytosol | 36.94 | 36.76 |
Os03t0690600-03 | Rice | cytosol | 43.23 | 36.66 |
OQU92829 | Sorghum | cytosol | 43.39 | 36.65 |
Zm00001d028603_P001 | Maize | cytosol | 43.23 | 36.51 |
Zm00001d035671_P001 | Maize | cytosol | 36.77 | 36.42 |
HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 37.74 | 36.34 |
GSMUA_Achr6P34090_001 | Banana | nucleus | 35.65 | 36.11 |
Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 39.19 | 36.11 |
TraesCS5D01G494900.1 | Wheat | cytosol | 38.23 | 36.07 |
TraesCS5B01G494500.1 | Wheat | cytosol | 38.23 | 36.07 |
TraesCS5A01G481300.1 | Wheat | cytosol | 37.9 | 35.88 |
Bra035653.1-P | Field mustard | cytosol | 41.61 | 35.73 |
HORVU3Hr1G012550.6 | Barley | cytosol | 34.03 | 35.4 |
KXG37250 | Sorghum | cytosol | 36.45 | 34.72 |
TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 41.61 | 33.33 |
TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 41.61 | 33.25 |
TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 41.29 | 32.99 |
HORVU5Hr1G045020.29 | Barley | cytosol | 41.29 | 32.53 |
TraesCS3D01G067900.1 | Wheat | nucleus | 35.97 | 32.32 |
Zm00001d047813_P002 | Maize | nucleus | 43.06 | 32.21 |
Bra026077.1-P | Field mustard | cytosol | 15.16 | 31.97 |
TraesCS1D01G030800.1 | Wheat | cytosol | 36.13 | 31.95 |
TraesCS1D01G030900.1 | Wheat | cytosol | 36.29 | 31.56 |
TraesCS1B01G037300.1 | Wheat | cytosol | 35.81 | 31.53 |
TraesCS1A01G030300.1 | Wheat | cytosol | 35.81 | 31.44 |
HORVU1Hr1G004440.1 | Barley | cytosol | 36.45 | 31.43 |
TraesCS3A01G068000.1 | Wheat | nucleus | 36.29 | 31.42 |
OQU91407 | Sorghum | nucleus | 34.68 | 31.34 |
GSMUA_AchrUn_... | Banana | cytosol | 33.23 | 31.26 |
TraesCS1B01G037400.1 | Wheat | cytosol | 36.45 | 31.26 |
TraesCS3B01G081100.1 | Wheat | nucleus | 35.81 | 31.05 |
TraesCS3D01G067700.1 | Wheat | cytosol | 36.13 | 31.02 |
KXG38064 | Sorghum | nucleus | 35.97 | 30.97 |
EER91260 | Sorghum | nucleus | 35.81 | 30.79 |
TraesCS3B01G080900.1 | Wheat | nucleus | 35.48 | 30.51 |
Bra015156.1-P | Field mustard | cytosol | 15.65 | 30.5 |
Zm00001d033166_P001 | Maize | nucleus | 35.81 | 30.33 |
TraesCS3B01G081000.1 | Wheat | cytosol | 35.48 | 30.22 |
TraesCS1D01G031000.1 | Wheat | cytosol | 35.32 | 30.21 |
TraesCS3D01G067800.1 | Wheat | nucleus | 32.9 | 30.18 |
TraesCS3A01G067900.1 | Wheat | cytosol | 35.0 | 30.06 |
TraesCS1A01G030200.1 | Wheat | cytosol | 34.84 | 29.96 |
Zm00001d035670_P001 | Maize | cytosol | 35.0 | 29.89 |
OQU91406 | Sorghum | nucleus | 35.81 | 29.68 |
EES18882 | Sorghum | cytosol | 34.84 | 29.47 |
TraesCS1D01G031200.1 | Wheat | cytosol | 34.52 | 29.36 |
EES18880 | Sorghum | cytosol | 34.52 | 28.88 |
Bra017915.1-P | Field mustard | cytoskeleton, cytosol, nucleus, plastid | 18.39 | 27.94 |
TraesCS1B01G037200.1 | Wheat | nucleus | 33.06 | 27.08 |
Bra020715.1-P | Field mustard | cytosol, plastid | 21.13 | 26.36 |
Bra036185.1-P | Field mustard | cytosol | 20.65 | 25.86 |
Bra018860.1-P | Field mustard | nucleus | 21.13 | 24.95 |
Bra021063.1-P | Field mustard | plastid | 21.13 | 24.72 |
Bra026237.1-P | Field mustard | plastid | 21.13 | 24.49 |
Bra012280.1-P | Field mustard | cytosol | 20.48 | 23.13 |
Bra028312.1-P | Field mustard | cytosol | 16.94 | 23.13 |
Bra022596.1-P | Field mustard | plastid | 18.87 | 20.21 |
Protein Annotations
MapMan:15.5.12 | EnsemblPlantsGene:Bra028391 | EnsemblPlants:Bra028391.1 | EnsemblPlants:Bra028391.1-P | ncoils:Coil | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR005202 | UniProt:M4EHX6 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF129 |
InterPro:TF_GRAS | UniParc:UPI00025431D6 | SEG:seg | : | : | : |
Description
AT2G29060 (E=4e-219) | scarecrow transcription factor family protein
Coordinates
chrA02:+:24986..26848
Molecular Weight (calculated)
71642.2 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.509
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPNLSLNLN AFEYLDESLF LDSSPSFDFD RNPSFLADPT EEPDENDSST TLLRYVTQIL MEESAGDKQS MFYDSLALRK TEEMLQQVIT DSKAHSATSG
101: SIGSSSSSWS SSVPVHEIVV RSMFSDAESD LQFRRGLEEA RKFLPNSDQW VFNLEKPAVR EVIKEERVKK SHQREVLDLE EQVRSSKQSA TNVEDVEVTD
201: MFDKVLLLDG QCDPQTLSSQ ETMSNKKKKK KKKKKKSQVI DFRTLLTHCA QAISTGDKTT ALDLLLQIRQ DSSPMGDASQ RLAHCFANAL EARLRGSPVI
301: QTYYNAITSL KETASDILKA YRVYLSSSPF VTLMYFFSFR MILDAAKDAE VLHIVDFGIL YGFQWPMFIQ YMSGRKDVPR KLRITGIELP QRGLRPAERI
401: EETGRRLAEY CKRFNVPFEY KAIASQHWES IRLDEFNIRP GEVLAVNAGL RLKTLQDETG GEETCPRDAV LKLIRKMNPD VFVHAIVNGS FNAPFFISRF
501: KEAVYHYYAL FDMFDSTLPR DNQERIRFER EFYGREAMNV IACEEGDRVE RPETYRQWQV RMVRAGFKQK PVRDEIVELF REKLKKWRYH KDFVVDENSK
601: WLLQGWKGRT LYASSCWVPA
101: SIGSSSSSWS SSVPVHEIVV RSMFSDAESD LQFRRGLEEA RKFLPNSDQW VFNLEKPAVR EVIKEERVKK SHQREVLDLE EQVRSSKQSA TNVEDVEVTD
201: MFDKVLLLDG QCDPQTLSSQ ETMSNKKKKK KKKKKKSQVI DFRTLLTHCA QAISTGDKTT ALDLLLQIRQ DSSPMGDASQ RLAHCFANAL EARLRGSPVI
301: QTYYNAITSL KETASDILKA YRVYLSSSPF VTLMYFFSFR MILDAAKDAE VLHIVDFGIL YGFQWPMFIQ YMSGRKDVPR KLRITGIELP QRGLRPAERI
401: EETGRRLAEY CKRFNVPFEY KAIASQHWES IRLDEFNIRP GEVLAVNAGL RLKTLQDETG GEETCPRDAV LKLIRKMNPD VFVHAIVNGS FNAPFFISRF
501: KEAVYHYYAL FDMFDSTLPR DNQERIRFER EFYGREAMNV IACEEGDRVE RPETYRQWQV RMVRAGFKQK PVRDEIVELF REKLKKWRYH KDFVVDENSK
601: WLLQGWKGRT LYASSCWVPA
001: MDPNFSESLN GFEYFDGNPN LLTDPMEDQY PPPSDTLLKY VSEILMEESN GDYKQSMFYD SLALRKTEEM LQQVITDSQN QSFSPADSLI TNSWDASGSI
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
Arabidopsis Description
SCL34Scarecrow-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:P0C884]
SUBAcon: [cytosol,nucleus,plastid]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.