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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 2
  • golgi 2
  • plasma membrane 2
  • endoplasmic reticulum 2
  • vacuole 2
  • nucleus 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47877 Canola nucleus 99.35 99.68
AT2G29065.1 Thale cress cytosol, nucleus, plastid 78.87 77.62
Bra015584.1-P Field mustard cytosol 42.26 60.09
Bra031580.1-P Field mustard cytosol 63.87 57.39
Bra031581.1-P Field mustard cytosol 61.61 57.19
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 25.32 49.53
PGSC0003DMT400005480 Potato cytosol 38.06 48.46
KRH29773 Soybean cytosol 43.87 44.3
HORVU3Hr1G012520.1 Barley cytosol 31.94 43.42
GSMUA_Achr10P... Banana nucleus 30.65 42.99
KRH29775 Soybean nucleus 46.13 42.5
KRH24778 Soybean nucleus 45.97 42.16
KRH29774 Soybean cytosol 42.74 42.0
KRH23091 Soybean endoplasmic reticulum, plasma membrane 49.19 41.05
Solyc06g076280.1.1 Tomato cytosol 49.52 41.04
TraesCS1B01G037500.1 Wheat cytosol 27.26 40.92
PGSC0003DMT400077972 Potato cytosol 49.19 40.56
KRH10241 Soybean cytosol, nucleus, peroxisome 44.84 40.41
KRH24775 Soybean cytosol 44.19 40.29
GSMUA_Achr10P... Banana cytosol 38.06 39.4
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 39.52 38.52
Bra033813.1-P Field mustard nucleus 35.97 38.32
Bra028390.1-P Field mustard cytosol 43.55 38.24
KXG38103 Sorghum cytosol 38.55 38.18
Zm00001d034664_P001 Maize plastid 34.35 38.1
Bra030688.1-P Field mustard nucleus 45.65 38.09
GSMUA_Achr7P15080_001 Banana cytosol 36.13 37.46
KXG21080 Sorghum cytosol 37.74 37.38
Zm00001d011070_P001 Maize cytosol 37.74 37.32
GSMUA_Achr8P02550_001 Banana nucleus 23.39 36.99
KXG21079 Sorghum cytosol 36.94 36.76
Os03t0690600-03 Rice cytosol 43.23 36.66
OQU92829 Sorghum cytosol 43.39 36.65
Zm00001d028603_P001 Maize cytosol 43.23 36.51
Zm00001d035671_P001 Maize cytosol 36.77 36.42
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 37.74 36.34
GSMUA_Achr6P34090_001 Banana nucleus 35.65 36.11
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 39.19 36.11
TraesCS5D01G494900.1 Wheat cytosol 38.23 36.07
TraesCS5B01G494500.1 Wheat cytosol 38.23 36.07
TraesCS5A01G481300.1 Wheat cytosol 37.9 35.88
Bra035653.1-P Field mustard cytosol 41.61 35.73
HORVU3Hr1G012550.6 Barley cytosol 34.03 35.4
KXG37250 Sorghum cytosol 36.45 34.72
TraesCS5D01G152700.1 Wheat cytosol, plastid 41.61 33.33
TraesCS5A01G139000.1 Wheat cytosol, plastid 41.61 33.25
TraesCS5B01G138100.1 Wheat cytosol, plastid 41.29 32.99
HORVU5Hr1G045020.29 Barley cytosol 41.29 32.53
TraesCS3D01G067900.1 Wheat nucleus 35.97 32.32
Zm00001d047813_P002 Maize nucleus 43.06 32.21
Bra026077.1-P Field mustard cytosol 15.16 31.97
TraesCS1D01G030800.1 Wheat cytosol 36.13 31.95
TraesCS1D01G030900.1 Wheat cytosol 36.29 31.56
TraesCS1B01G037300.1 Wheat cytosol 35.81 31.53
TraesCS1A01G030300.1 Wheat cytosol 35.81 31.44
HORVU1Hr1G004440.1 Barley cytosol 36.45 31.43
TraesCS3A01G068000.1 Wheat nucleus 36.29 31.42
OQU91407 Sorghum nucleus 34.68 31.34
GSMUA_AchrUn_... Banana cytosol 33.23 31.26
TraesCS1B01G037400.1 Wheat cytosol 36.45 31.26
TraesCS3B01G081100.1 Wheat nucleus 35.81 31.05
TraesCS3D01G067700.1 Wheat cytosol 36.13 31.02
KXG38064 Sorghum nucleus 35.97 30.97
EER91260 Sorghum nucleus 35.81 30.79
TraesCS3B01G080900.1 Wheat nucleus 35.48 30.51
Bra015156.1-P Field mustard cytosol 15.65 30.5
Zm00001d033166_P001 Maize nucleus 35.81 30.33
TraesCS3B01G081000.1 Wheat cytosol 35.48 30.22
TraesCS1D01G031000.1 Wheat cytosol 35.32 30.21
TraesCS3D01G067800.1 Wheat nucleus 32.9 30.18
TraesCS3A01G067900.1 Wheat cytosol 35.0 30.06
TraesCS1A01G030200.1 Wheat cytosol 34.84 29.96
Zm00001d035670_P001 Maize cytosol 35.0 29.89
OQU91406 Sorghum nucleus 35.81 29.68
EES18882 Sorghum cytosol 34.84 29.47
TraesCS1D01G031200.1 Wheat cytosol 34.52 29.36
EES18880 Sorghum cytosol 34.52 28.88
Bra017915.1-P Field mustard cytoskeleton, cytosol, nucleus, plastid 18.39 27.94
TraesCS1B01G037200.1 Wheat nucleus 33.06 27.08
Bra020715.1-P Field mustard cytosol, plastid 21.13 26.36
Bra036185.1-P Field mustard cytosol 20.65 25.86
Bra018860.1-P Field mustard nucleus 21.13 24.95
Bra021063.1-P Field mustard plastid 21.13 24.72
Bra026237.1-P Field mustard plastid 21.13 24.49
Bra012280.1-P Field mustard cytosol 20.48 23.13
Bra028312.1-P Field mustard cytosol 16.94 23.13
Bra022596.1-P Field mustard plastid 18.87 20.21
Protein Annotations
MapMan:15.5.12EnsemblPlantsGene:Bra028391EnsemblPlants:Bra028391.1EnsemblPlants:Bra028391.1-Pncoils:CoilGO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR005202UniProt:M4EHX6PFAM:PF03514PFscan:PS50985PANTHER:PTHR31636PANTHER:PTHR31636:SF129
InterPro:TF_GRASUniParc:UPI00025431D6SEG:seg:::
Description
AT2G29060 (E=4e-219) | scarecrow transcription factor family protein
Coordinates
chrA02:+:24986..26848
Molecular Weight (calculated)
71642.2 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.509
Length
620 amino acids
Sequence
(BLAST)
001: MDPNLSLNLN AFEYLDESLF LDSSPSFDFD RNPSFLADPT EEPDENDSST TLLRYVTQIL MEESAGDKQS MFYDSLALRK TEEMLQQVIT DSKAHSATSG
101: SIGSSSSSWS SSVPVHEIVV RSMFSDAESD LQFRRGLEEA RKFLPNSDQW VFNLEKPAVR EVIKEERVKK SHQREVLDLE EQVRSSKQSA TNVEDVEVTD
201: MFDKVLLLDG QCDPQTLSSQ ETMSNKKKKK KKKKKKSQVI DFRTLLTHCA QAISTGDKTT ALDLLLQIRQ DSSPMGDASQ RLAHCFANAL EARLRGSPVI
301: QTYYNAITSL KETASDILKA YRVYLSSSPF VTLMYFFSFR MILDAAKDAE VLHIVDFGIL YGFQWPMFIQ YMSGRKDVPR KLRITGIELP QRGLRPAERI
401: EETGRRLAEY CKRFNVPFEY KAIASQHWES IRLDEFNIRP GEVLAVNAGL RLKTLQDETG GEETCPRDAV LKLIRKMNPD VFVHAIVNGS FNAPFFISRF
501: KEAVYHYYAL FDMFDSTLPR DNQERIRFER EFYGREAMNV IACEEGDRVE RPETYRQWQV RMVRAGFKQK PVRDEIVELF REKLKKWRYH KDFVVDENSK
601: WLLQGWKGRT LYASSCWVPA
Best Arabidopsis Sequence Match ( AT2G29065.1 )
(BLAST)
001: MDPNFSESLN GFEYFDGNPN LLTDPMEDQY PPPSDTLLKY VSEILMEESN GDYKQSMFYD SLALRKTEEM LQQVITDSQN QSFSPADSLI TNSWDASGSI
101: DESAYSADPQ PVNEIMVKSM FSDAESALQF KKGVEEASKF LPNSDQWVIN LDIERSERRD SVKEEMGLDQ LRVKKNHERD FEEVRSSKQF ASNVEDSKVT
201: DMFDKVLLLD GECDPQTLLD SEIQAIRSSK NIGEKGKKKK KKKSQVVDFR TLLTHCAQAI STGDKTTALE FLLQIRQQSS PLGDAGQRLA HCFANALEAR
301: LQGSTGPMIQ TYYNALTSSL KDTAADTIRA YRVYLSSSPF VTLMYFFSIW MILDVAKDAP VLHIVDFGIL YGFQWPMFIQ SISDRKDVPR KLRITGIELP
401: QCGFRPAERI EETGRRLAEY CKRFNVPFEY KAIASQNWET IRIEDLDIRP NEVLAVNAGL RLKNLQDETG SEENCPRDAV LKLIRNMNPD VFIHAIVNGS
501: FNAPFFISRF KEAVYHYSAL FDMFDSTLPR DNKERIRFER EFYGREAMNV IACEEADRVE RPETYRQWQV RMVRAGFKQK TIKPELVELF RGKLKKWRYH
601: KDFVVDENSK WLLQGWKGRT LYASSCWVPA
Arabidopsis Description
SCL34Scarecrow-like protein 34 [Source:UniProtKB/Swiss-Prot;Acc:P0C884]
SUBAcon: [cytosol,nucleus,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.