CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011070_P001	Maize	cytosol	85.94	85.81
KXG38103	Sorghum	cytosol	67.89	67.89
KXG21079	Sorghum	cytosol	67.41	67.74
Solyc04g011630.1.1	Tomato	cytosol	15.18	55.88
CDX68389	Canola	cytosol	7.35	54.12
VIT_06s0004g04990.t01	Wine grape	cytosol	32.43	45.93
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	23.0	45.43
CDX80265	Canola	endoplasmic reticulum, golgi	22.68	44.8
GSMUA_Achr8P02550_001	Banana	nucleus	27.96	44.64
PGSC0003DMT400005480	Potato	cytosol	32.75	42.09
VIT_13s0019g01780.t01	Wine grape	nucleus	39.3	41.0
OQU91407	Sorghum	nucleus	44.89	40.96
OQU92829	Sorghum	cytosol	47.6	40.6
GSMUA_Achr6P34090_001	Banana	nucleus	39.62	40.52
EES18882	Sorghum	cytosol	47.44	40.52
KRH10240	Soybean	cytosol	38.98	40.26
PGSC0003DMT400049420	Potato	cytosol	42.49	40.06
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	44.57	39.35
EES18880	Sorghum	cytosol	46.49	39.27
KRH29773	Soybean	cytosol	38.18	38.93
CDY71578	Canola	nucleus, plastid	31.79	38.2
CDY47877	Canola	nucleus	37.38	37.86
Bra028391.1-P	Field mustard	nucleus	37.38	37.74
KXG37250	Sorghum	cytosol	39.14	37.63
AT3G46600.1	Thale cress	cytosol	34.98	37.56
VIT_13s0019g01790.t01	Wine grape	cytosol	43.13	37.55
VIT_06s0004g04970.t01	Wine grape	cytosol	39.46	37.54
PGSC0003DMT400016258	Potato	cytosol	43.61	37.5
KRH23094	Soybean	cytosol	33.07	37.43
Bra015584.1-P	Field mustard	cytosol	26.04	37.39
CDY39530	Canola	cytosol	36.9	37.32
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	37.54	37.3
KRH23095	Soybean	cytosol	39.14	37.29
KRH24780	Soybean	cytosol	39.3	37.27
Bra033813.1-P	Field mustard	nucleus	34.5	37.11
EER91260	Sorghum	nucleus	42.65	37.03
Solyc05g053090.1.1	Tomato	cytosol	43.93	37.01
PGSC0003DMT400069949	Potato	cytosol	44.09	36.95
KRH29774	Soybean	cytosol	37.22	36.93
KRH29771	Soybean	cytosol	40.1	36.91
VIT_13s0019g01810.t01	Wine grape	cytosol	44.09	36.9
CDY33040	Canola	nucleus	35.14	36.85
VIT_13s0019g01710.t01	Wine grape	cytosol	42.65	36.73
AT5G59450.1	Thale cress	nucleus	35.78	36.72
KRH65839	Soybean	cytosol, plastid	42.81	36.71
KXG38064	Sorghum	nucleus	42.17	36.67
KRG99969	Soybean	cytosol	43.13	36.63
KRH49113	Soybean	cytosol	42.81	36.51
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	39.14	36.4
CDY07777	Canola	cytosol, nucleus, peroxisome	39.14	36.4
CDX79750	Canola	peroxisome	39.14	36.35
PGSC0003DMT400022997	Potato	cytosol, plastid	44.09	36.27
OQU91406	Sorghum	nucleus	43.29	36.23
CDX82987	Canola	nucleus	34.66	36.11
KRH24773	Soybean	nucleus	39.62	36.1
Solyc09g010920.1.1	Tomato	cytosol	43.77	36.01
GSMUA_AchrUn_...	Banana	cytosol	37.86	35.96
KRH29775	Soybean	nucleus	38.66	35.96
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	37.06	35.91
VIT_13s0019g01700.t01	Wine grape	cytosol	43.13	35.53
VIT_06s0004g04980.t01	Wine grape	nucleus	39.94	35.51
Solyc10g086530.1.1	Tomato	cytosol	43.13	35.48
OQU84115	Sorghum	cytosol	27.48	35.32
KRH24775	Soybean	cytosol	38.34	35.29
VIT_06s0004g04950.t01	Wine grape	cytosol	42.49	35.28
Solyc06g082530.1.1	Tomato	cytosol	36.74	35.22
CDX86475	Canola	nucleus	39.94	35.21
CDY06266	Canola	cytosol	35.46	35.13
KRH24778	Soybean	nucleus	37.86	35.06
CDY47878	Canola	nucleus	38.66	35.02
OQU83981	Sorghum	cytosol	27.8	35.01
OQU84111	Sorghum	cytosol	37.38	34.72
PGSC0003DMT400078286	Potato	nucleus	36.9	34.63
OQU84113	Sorghum	cytosol, nucleus, plastid	35.3	34.59
Bra028390.1-P	Field mustard	cytosol	38.98	34.56
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	40.89	34.45
AT2G29060.1	Thale cress	cytosol	38.18	34.44
OQU84116	Sorghum	nucleus	34.03	34.41
AT2G37650.1	Thale cress	cytosol	39.3	34.26
KRH10241	Soybean	cytosol, nucleus, peroxisome	37.38	34.01
PGSC0003DMT400077972	Potato	cytosol	40.73	33.91
EES01740	Sorghum	cytosol	43.61	33.83
Solyc01g100200.2.1	Tomato	nucleus	35.94	33.78
Bra031580.1-P	Field mustard	cytosol	37.22	33.77
CDY06265	Canola	cytosol	37.22	33.77
KRH23089	Soybean	cytosol	34.66	33.7
Solyc06g076280.1.1	Tomato	cytosol	40.26	33.69
KRH29779	Soybean	cytosol	39.78	33.56
KXG29219	Sorghum	cytosol	36.9	33.53
Bra030688.1-P	Field mustard	nucleus	39.78	33.51
KRH10243	Soybean	nucleus	35.46	33.38
OQU84105	Sorghum	cytosol	38.82	33.29
EES09053	Sorghum	cytosol	34.03	33.28
OQU83979	Sorghum	plastid	32.27	33.28
Bra031581.1-P	Field mustard	cytosol	35.46	33.23
CDY15616	Canola	nucleus	37.86	33.15
KXG29228	Sorghum	cytosol	32.75	33.12
CDX77228	Canola	cytosol	35.46	33.04
AT1G07520.3	Thale cress	cytosol	36.42	32.76
EES16206	Sorghum	cytosol	38.18	32.74
CDY09912	Canola	cytosol	36.58	32.71
OQU84120	Sorghum	nucleus	33.07	32.65
OQU84114	Sorghum	mitochondrion	24.92	32.57
Bra035653.1-P	Field mustard	cytosol	37.22	32.27
KRH23090	Soybean	vacuole	31.95	32.21
CDX68388	Canola	cytosol	21.25	32.13
CDY31749	Canola	cytosol	37.22	32.09
AT1G07530.1	Thale cress	cytosol	39.14	31.86
KXG26392	Sorghum	cytosol	31.95	31.55
OQU90003	Sorghum	cytosol	38.5	31.22
KXG29223	Sorghum	cytosol	35.14	30.94
KXG29232	Sorghum	cytosol	33.55	30.88
VIT_06s0004g04960.t01	Wine grape	nucleus	39.3	30.87
OQU83980	Sorghum	cytosol	30.35	30.6
OQU84112	Sorghum	cytosol	34.98	30.54
OQU83978	Sorghum	mitochondrion	30.35	30.02
KXG29224	Sorghum	nucleus	33.23	30.01
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	30.19	29.76
CDY09911	Canola	nucleus	27.32	29.28
OQU81651	Sorghum	cytosol	32.59	29.14
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	37.38	29.07
KXG36217	Sorghum	cytosol	37.22	28.07
EER97449	Sorghum	cytosol	23.0	26.33
EER95348	Sorghum	cytosol	20.61	24.07
KXG33821	Sorghum	cytosol	21.25	23.37
EER97346	Sorghum	cytosol	20.61	22.63
EES18257	Sorghum	cytosol	20.13	22.38
EES05727	Sorghum	cytosol	18.05	17.96
EES12703	Sorghum	cytosol, nucleus, plastid	16.29	15.64

Protein Annotations

MapMan:15.5.12	UniProt:A0A1B6P5S1	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	EnsemblPlants:KXG21080	ProteinID:KXG21080
ProteinID:KXG21080.1	ProteinID:OQU77220.1	ProteinID:OQU77221.1	ProteinID:OQU77222.1	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF14	EnsemblPlantsGene:SORBI_3009G011100	InterPro:TF_GRAS	UniParc:UPI0003C6F1A0	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:1012649..1016041

Molecular Weight (calculated)

71180.9 Da

IEP (calculated)

6.790

GRAVY (calculated)

-0.414

Length

626 amino acids

Sequence
(BLAST)

001: MDNPEYCEIN SNITLNYVNQ LLMEESADEN ISTYKHHDAL QAMEKPFYDI LGKAYPSSPK QTVINSGSQS NFPDDINNNY HDLECSGSSV SDILGCKAVR
101: LIDIDGGSEL CNVVLQFNRT AEEARKLVPS IEKLVVDPES NGLSSSKQTI EATIGQHSKH TNKIRSHPHV DLELVERRNS KHSAISTSEI IRDEIFDRVL
201: LCDEQYHCDV AHLREMKAKE ANISLQYVRN TGSAQGKEKS QGKKQEKEEV DLRALLIQCA QAISSNNHPF ASELLKKIRH HSSPYGDGFQ RLAIYFADAL
301: EARVAGTGSQ MYQKLVVKQT SCLDMLKAYS LFIAASPFVR VAYYFGNKTI VDVLGGRPRV HIIDFGILFG FQWPSLIQRL AKREGGPPQL RITGINVPET
401: GFRPCKTIEE TGKRLAEYAR MFNVPFQYQG VASRWEDIYI PDLNIDKDEV LIVNCLHKMK NLGDETEDID SARDRVLRIM KRMNPNVLII GVMNGLYSSP
501: FFLPRFREAL FYYSSQFDML NSTVAQNHEA RILIERDLLG ADVFNVVACE GAERIERPES YKQWQVRILK AGFKQLPVNQ TILKSSLDRK ELYHEDFVID
601: EDSGWLLQGW KGRIMHALSS WKRKDS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.