CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29228	Sorghum	cytosol	62.01	48.79
OQU83981	Sorghum	cytosol	45.38	44.47
OQU83980	Sorghum	cytosol	56.67	44.44
OQU83979	Sorghum	plastid	55.03	44.15
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	54.62	41.89
OQU83978	Sorghum	mitochondrion	52.77	40.6
Os11t0706200-00	Rice	nucleus	46.82	38.45
OQU81651	Sorghum	cytosol	55.24	38.43
OQU84113	Sorghum	cytosol, nucleus, plastid	48.46	36.93
GSMUA_Achr5P08320_001	Banana	cytosol	33.68	36.53
OQU84116	Sorghum	nucleus	46.41	36.51
OQU84111	Sorghum	cytosol	49.28	35.61
KXG29219	Sorghum	cytosol	49.69	35.12
OQU84120	Sorghum	nucleus	45.59	35.02
OQU84105	Sorghum	cytosol	52.16	34.79
OQU84114	Sorghum	mitochondrion	33.88	34.45
EES09053	Sorghum	cytosol	44.76	34.06
KXG29232	Sorghum	cytosol	45.59	32.65
OQU84112	Sorghum	cytosol	47.43	32.22
EES16206	Sorghum	cytosol	47.23	31.51
KXG36217	Sorghum	cytosol	53.39	31.33
KXG26392	Sorghum	cytosol	40.66	31.23
OQU90003	Sorghum	cytosol	49.49	31.22
KXG29223	Sorghum	cytosol	44.76	30.66
KXG29224	Sorghum	nucleus	42.71	30.01
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	48.46	29.32
KXG38103	Sorghum	cytosol	37.58	29.23
KXG21079	Sorghum	cytosol	36.14	28.25
KXG21080	Sorghum	cytosol	35.32	27.48
OQU92829	Sorghum	cytosol	40.66	26.98
KXG37250	Sorghum	cytosol	33.68	25.19
EES01740	Sorghum	cytosol	41.48	25.03
OQU91407	Sorghum	nucleus	33.47	23.76
EER91260	Sorghum	nucleus	35.11	23.72
KXG38064	Sorghum	nucleus	34.29	23.19
EES18882	Sorghum	cytosol	34.5	22.92
OQU91406	Sorghum	nucleus	34.5	22.46
EES18880	Sorghum	cytosol	32.24	21.19
EER95348	Sorghum	cytosol	22.79	20.71
EER97449	Sorghum	cytosol	22.38	19.93
EER97346	Sorghum	cytosol	21.77	18.6
KXG33821	Sorghum	cytosol	21.56	18.45
EES18257	Sorghum	cytosol	20.74	17.94
EES05727	Sorghum	cytosol	20.94	16.22
EES12703	Sorghum	cytosol, nucleus, plastid	19.51	14.57

Protein Annotations

EnsemblPlants:OQU84115	EnsemblPlantsGene:SORBI_3005G230500	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU84115	ProteinID:OQU84115.1	SEG:seg
UniParc:UPI000B8B98E7	UniProt:A0A1Z5RKY8	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71704861..71706712

Molecular Weight (calculated)

54503.2 Da

IEP (calculated)

5.761

GRAVY (calculated)

-0.223

Length

487 amino acids

Sequence
(BLAST)

001: MAITPEEFFA VDLMEMEPSP PSPSINLPLM PDGGGQGPLS DDDLVLTYIS GLLMEEDIDD KLLGQYSDHP ALLQAQQSYA QLLSSPSFNA NSDNTFNSGN
101: MEGAKNSLQG CSGDQYTLSS SFSKGVDEEG QFSKGLEEAH RFLSGDNSFG KGEQAVAMND HTVAVGLLKQ IKQHASATGD AAQRLAHCFA KGLEARLAGT
201: GMQLWKSLMA EHPIVMDFLK AYSLFMAACC FHKIALKFSI MTIEDAMVGK SSLHIVDYGL IRSLANRNVG PPQVTITAIS HFQPRIYPAQ QIEEQGCRLS
301: KCAKEFGLPF KFHVITKKWE DVFIEDLNKD TDEVLIVNDL LNFSSLMDVS VFFDASNPRD TVLSNIRRMR PCIFIQSIVN RSSGTSFLSR FRELLFNYMA
401: LFDMSDATMP RNSEFHGVDL VNRPEKYMQW QVRNQRAGLR QLLLKPSIIK ALKDEVKKEY HKDFFLTEDS QWLLQGWKGR VLFAHST

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.