CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29219	Sorghum	cytosol	50.36	50.65
OQU84111	Sorghum	cytosol	48.92	50.3
OQU84112	Sorghum	cytosol	51.52	49.79
EES09053	Sorghum	cytosol	45.45	49.22
KXG29223	Sorghum	cytosol	49.78	48.52
OQU84113	Sorghum	cytosol, nucleus, plastid	41.99	45.54
OQU84105	Sorghum	cytosol	47.19	44.79
OQU84116	Sorghum	nucleus	39.54	44.26
OQU90003	Sorghum	cytosol	47.91	43.01
OQU84115	Sorghum	cytosol	30.01	42.71
OQU83981	Sorghum	cytosol	30.59	42.66
OQU84120	Sorghum	nucleus	38.96	42.59
KXG29228	Sorghum	cytosol	37.95	42.49
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	48.48	41.74
OQU84114	Sorghum	mitochondrion	28.57	41.34
KXG26392	Sorghum	cytosol	37.37	40.85
GSMUA_Achr5P08320_001	Banana	cytosol	26.41	40.76
KXG36217	Sorghum	cytosol	48.77	40.72
EES16206	Sorghum	cytosol	42.86	40.68
KXG29232	Sorghum	cytosol	39.39	40.15
OQU83978	Sorghum	mitochondrion	36.65	40.13
OQU83980	Sorghum	cytosol	34.92	38.97
OQU83979	Sorghum	plastid	34.05	38.88
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	35.5	38.74
OQU81651	Sorghum	cytosol	37.09	36.71
KXG38103	Sorghum	cytosol	31.17	34.5
KXG21079	Sorghum	cytosol	30.3	33.71
KXG37250	Sorghum	cytosol	31.46	33.49
KXG21080	Sorghum	cytosol	30.01	33.23
OQU92829	Sorghum	cytosol	34.34	32.43
EES01740	Sorghum	cytosol	35.79	30.73
OQU91407	Sorghum	nucleus	29.15	29.45
EER91260	Sorghum	nucleus	30.16	28.99
KXG38064	Sorghum	nucleus	29.87	28.75
OQU91406	Sorghum	nucleus	29.44	27.27
EES18882	Sorghum	cytosol	28.72	27.15
EES18880	Sorghum	cytosol	28.43	26.59
EER97449	Sorghum	cytosol	18.33	23.22
EER95348	Sorghum	cytosol	17.46	22.57
EER97346	Sorghum	cytosol	18.18	22.11
EES18257	Sorghum	cytosol	17.32	21.31
KXG33821	Sorghum	cytosol	17.32	21.09
EES05727	Sorghum	cytosol	18.61	20.51
EES12703	Sorghum	cytosol, nucleus, plastid	15.44	16.41

Protein Annotations

MapMan:15.5.12	UniProt:A0A1B6PU74	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	EnsemblPlants:KXG29224	ProteinID:KXG29224
ProteinID:KXG29224.1	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF41	EnsemblPlantsGene:SORBI_3005G230100
InterPro:TF_GRAS	UniParc:UPI00081ABE25	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71684680..71686761

Molecular Weight (calculated)

77021.1 Da

IEP (calculated)

5.683

GRAVY (calculated)

-0.369

Length

693 amino acids

Sequence
(BLAST)

001: MAAEPEDIPD EEPFSPSIFL NLSPTPAPHR DDDHQDPANH QASQTSTEIL SVANTISGGV GTSGFTLSPC FSDTTATVLD GVTCWPYDPV ELSQKLLYST
101: TRTASLHVQD ASASVGFWQN GGKLKTATTA PASAGDDVGE HDALFSGGGA GETSRVTMDM LNQAFLKGME EANKFLPTNN TLLTHFHLET ISESGDRHGI
201: AAGQKRHNHQ EDNDSLEAEA GRKSKVVAPE PEETGEMVDR FVLVGYQSLL DKMMDMSIAV DSEAEHKART KQGKKKPTIT MAASSSSKEE EEEVVVDLHA
301: LLLQCAHAVA TGNRLQATEL LCKIKRHSSP TGDATQRLAY CFARALDARL AGTGNQLYRS LMAKHTSAME FIKAYQMYLA VSCFKMMAFK FSNLTICKAV
401: AGSTSRRKKK LHIVDYGEHC YGFHWPTLLG FWGTKTWDED EAGPPEVRIT FVGLPQPGFR PAARIEETGR RLSTFARQCG IPFRFRCIAA KWETVCADDL
501: DLEPDEVLVV NGLFHFGRMM DEGIDDIYSP SPRDVLLGNI QKMRPHVFIL CVENSLHNAP YFLGRFQEAL FYYSSMFDMM DAAAPRNNDQ RLLVEQDLFG
601: GRVLNAVACE GFDRVERPET YKQWQARNDR AGLRQLPLDP DIVKAVSDKV RDNYHRDFVV YVDQKWILQG WKGRILYAMS TWVANEDAIS NLS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.