CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83979	Sorghum	plastid	73.84	60.46
OQU83980	Sorghum	cytosol	73.04	58.45
Zm00001d007713_P001	Maize	cytosol	64.19	53.26
OQU83978	Sorghum	mitochondrion	63.58	49.92
KXG29228	Sorghum	cytosol	58.15	46.69
OQU84115	Sorghum	cytosol	44.47	45.38
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	57.14	44.72
Os11t0706200-00	Rice	nucleus	49.3	41.32
OQU81651	Sorghum	cytosol	52.31	37.14
OQU84116	Sorghum	nucleus	44.27	35.54
OQU84113	Sorghum	cytosol, nucleus, plastid	44.87	34.9
KXG29219	Sorghum	cytosol	46.68	33.67
OQU84114	Sorghum	mitochondrion	32.39	33.61
OQU84120	Sorghum	nucleus	42.66	33.44
OQU84111	Sorghum	cytosol	45.27	33.38
OQU84105	Sorghum	cytosol	46.88	31.92
KXG26392	Sorghum	cytosol	39.24	30.76
KXG29224	Sorghum	nucleus	42.66	30.59
GSMUA_Achr5P08320_001	Banana	cytosol	27.57	30.51
EES16206	Sorghum	cytosol	44.47	30.27
OQU84112	Sorghum	cytosol	43.66	30.27
EES09053	Sorghum	cytosol	38.43	29.84
OQU90003	Sorghum	cytosol	45.88	29.53
KXG29232	Sorghum	cytosol	40.24	29.41
KXG36217	Sorghum	cytosol	49.09	29.4
KXG21079	Sorghum	cytosol	35.81	28.57
KXG29223	Sorghum	cytosol	40.85	28.55
KXG38103	Sorghum	cytosol	35.81	28.43
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	45.88	28.32
KXG21080	Sorghum	cytosol	35.01	27.8
KXG37250	Sorghum	cytosol	35.61	27.19
OQU92829	Sorghum	cytosol	37.63	25.48
EES01740	Sorghum	cytosol	40.04	24.66
OQU91407	Sorghum	nucleus	33.6	24.34
EER91260	Sorghum	nucleus	34.61	23.86
KXG38064	Sorghum	nucleus	34.21	23.61
EES18882	Sorghum	cytosol	34.0	23.06
OQU91406	Sorghum	nucleus	34.21	22.73
EES18880	Sorghum	cytosol	33.8	22.67
KXG33821	Sorghum	cytosol	23.74	20.74
EER97449	Sorghum	cytosol	22.74	20.66
EER97346	Sorghum	cytosol	23.34	20.35
EER95348	Sorghum	cytosol	21.33	19.78
EES18257	Sorghum	cytosol	22.13	19.54
EES05727	Sorghum	cytosol	20.32	16.06
EES12703	Sorghum	cytosol, nucleus, plastid	20.12	15.34

Protein Annotations

EnsemblPlants:OQU83981	EnsemblPlantsGene:SORBI_3005G209300	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU83981	ProteinID:OQU83981.1	SEG:seg
UniParc:UPI000B8BB138	UniProt:A0A1Z5RK72	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:69605857..69608002

Molecular Weight (calculated)

57662.9 Da

IEP (calculated)

7.764

GRAVY (calculated)

-0.366

Length

497 amino acids

Sequence
(BLAST)

001: MEEANMFLLK DNNFSKDEQV NQIRESSVIG SRIKKRYNRD HLLEEEEEEV RSTSKAMMMI KEPEEKCGNE MLEKMMLHVY DTCIIKGMER VTINNSGADK
101: RNKKSRRIKT TRKNMVDIGT LLISCAQALA VDDHMRACEH LMQIKQHASA TGDATQRLAH CFTKGLEARI GAKGRQIWQL LMSEHPSLVD FLKAYDLYTK
201: VCCFLKVTFI FSTMTIMQAM VGKSRLHIVD YGMRYGFQWA GLLRLLASRE GGPPEVKFTA IARPKSAYYP SEQIEKIGCR LKKYAHELGF PLFKFHAIMR
301: NWEDISIMDM HTDDDEVLVV SDMFSFSILM EESIFFDSQS PRDTVLNNIK KMRPDVFIQS VSNRSYGSSF LSRFREMLFY YMALFDMLDA TIPRESKSRS
401: VLEQVVLGYY IFNDISCEGM DIVERPEKYR QWQTRNQRAG LRQLPLESSI VKAVEDEVRK HYHKDFMICQ DGQWLLQGWM GHVLAAHTTW VADDASS

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.