CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38064	Sorghum	nucleus	83.63	83.75
OQU91407	Sorghum	nucleus	66.57	69.97
OQU91406	Sorghum	nucleus	70.04	67.51
HORVU3Hr1G012520.1	Barley	cytosol	39.39	62.28
HORVU3Hr1G012550.6	Barley	cytosol	48.82	59.06
TraesCS3D01G067800.1	Wheat	nucleus	51.59	55.03
TraesCS3D01G067900.1	Wheat	nucleus	52.29	54.64
TraesCS3A01G068000.1	Wheat	nucleus	54.09	54.47
TraesCS3D01G067700.1	Wheat	cytosol	54.23	54.16
TraesCS3B01G081100.1	Wheat	nucleus	53.68	54.13
TraesCS3A01G067900.1	Wheat	cytosol	53.26	53.19
TraesCS3B01G081000.1	Wheat	cytosol	53.26	52.75
TraesCS3B01G080900.1	Wheat	nucleus	52.29	52.29
Solyc04g011630.1.1	Tomato	cytosol	12.07	51.18
VIT_06s0004g04990.t01	Wine grape	cytosol	27.46	44.8
CDX68389	Canola	cytosol	5.27	44.71
KXG21079	Sorghum	cytosol	38.42	44.46
KXG38103	Sorghum	cytosol	38.56	44.41
KXG21080	Sorghum	cytosol	37.03	42.65
PGSC0003DMT400005480	Potato	cytosol	27.74	41.07
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	17.75	40.38
CDX80265	Canola	endoplasmic reticulum, golgi	17.61	40.06
EES18882	Sorghum	cytosol	40.22	39.56
EES18880	Sorghum	cytosol	40.08	39.0
KRH10240	Soybean	cytosol	32.59	38.78
GSMUA_Achr8P02550_001	Banana	nucleus	21.08	38.78
VIT_13s0019g01780.t01	Wine grape	nucleus	32.18	38.67
PGSC0003DMT400049420	Potato	cytosol	35.23	38.25
CDY71578	Canola	nucleus, plastid	27.6	38.2
GSMUA_Achr6P34090_001	Banana	nucleus	32.04	37.75
Bra015584.1-P	Field mustard	cytosol	22.47	37.16
OQU92829	Sorghum	cytosol	37.73	37.06
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.06	36.67
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	31.76	36.35
CDY47877	Canola	nucleus	30.93	36.08
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	33.56	35.96
CDY07777	Canola	cytosol, nucleus, peroxisome	33.56	35.96
CDX79750	Canola	peroxisome	33.56	35.91
Bra028391.1-P	Field mustard	nucleus	30.79	35.81
KRH23094	Soybean	cytosol	27.46	35.8
VIT_06s0004g04970.t01	Wine grape	cytosol	32.59	35.71
CDY39530	Canola	cytosol	30.51	35.54
KRH24780	Soybean	cytosol	32.45	35.45
Solyc10g086530.1.1	Tomato	cytosol	37.17	35.22
OQU84115	Sorghum	cytosol	23.72	35.11
VIT_13s0019g01810.t01	Wine grape	cytosol	36.2	34.89
PGSC0003DMT400016258	Potato	cytosol	35.23	34.89
VIT_13s0019g01710.t01	Wine grape	cytosol	35.09	34.8
KRH23095	Soybean	cytosol	31.62	34.7
OQU83981	Sorghum	cytosol	23.86	34.61
CDY47878	Canola	nucleus	32.87	34.3
AT2G37650.1	Thale cress	cytosol	34.12	34.26
KRH65839	Soybean	cytosol, plastid	34.67	34.25
VIT_06s0004g04980.t01	Wine grape	nucleus	33.43	34.23
PGSC0003DMT400022997	Potato	cytosol, plastid	36.06	34.17
KRH29773	Soybean	cytosol	28.99	34.04
Solyc09g010920.1.1	Tomato	cytosol	35.92	34.03
VIT_13s0019g01790.t01	Wine grape	cytosol	33.84	33.94
KXG29228	Sorghum	cytosol	29.13	33.93
KRH49113	Soybean	cytosol	34.54	33.92
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	30.37	33.9
Bra028390.1-P	Field mustard	cytosol	33.15	33.85
OQU84113	Sorghum	cytosol, nucleus, plastid	29.96	33.8
KXG37250	Sorghum	cytosol	30.51	33.79
OQU84120	Sorghum	nucleus	29.68	33.75
CDY06266	Canola	cytosol	29.54	33.7
CDX86475	Canola	nucleus	33.15	33.66
KRG99969	Soybean	cytosol	34.4	33.65
CDX77228	Canola	cytosol	31.35	33.63
KRH29774	Soybean	cytosol	29.4	33.6
VIT_13s0019g01700.t01	Wine grape	cytosol	35.23	33.42
OQU84111	Sorghum	cytosol	31.21	33.38
KRH29775	Soybean	nucleus	31.07	33.28
Solyc06g082530.1.1	Tomato	cytosol	30.1	33.23
Bra033813.1-P	Field mustard	nucleus	26.77	33.16
AT3G46600.1	Thale cress	cytosol	26.77	33.1
Bra035653.1-P	Field mustard	cytosol	33.15	33.1
KXG29219	Sorghum	cytosol	31.62	33.09
AT2G29060.1	Thale cress	cytosol	31.62	32.85
CDY31749	Canola	cytosol	33.01	32.78
Solyc01g100200.2.1	Tomato	nucleus	30.24	32.73
PGSC0003DMT400077972	Potato	cytosol	34.12	32.71
KRH24778	Soybean	nucleus	30.65	32.69
KXG26392	Sorghum	cytosol	28.71	32.65
KRH24773	Soybean	nucleus	31.07	32.61
KRH10241	Soybean	cytosol, nucleus, peroxisome	31.07	32.56
PGSC0003DMT400078286	Potato	nucleus	30.1	32.53
KRH24775	Soybean	cytosol	30.65	32.5
VIT_06s0004g04950.t01	Wine grape	cytosol	33.98	32.49
Solyc06g076280.1.1	Tomato	cytosol	33.7	32.49
CDX82987	Canola	nucleus	27.05	32.45
Solyc05g053090.1.1	Tomato	cytosol	33.43	32.44
CDY15616	Canola	nucleus	32.04	32.31
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.29	32.3
AT5G59450.1	Thale cress	nucleus	27.32	32.3
Bra030688.1-P	Field mustard	nucleus	33.15	32.17
KRH29779	Soybean	cytosol	33.01	32.08
PGSC0003DMT400069949	Potato	cytosol	33.15	31.99
OQU84105	Sorghum	cytosol	32.32	31.92
KRH29771	Soybean	cytosol	30.1	31.91
Bra031581.1-P	Field mustard	cytosol	29.54	31.89
EES16206	Sorghum	cytosol	32.18	31.78
OQU84116	Sorghum	nucleus	27.18	31.66
GSMUA_AchrUn_...	Banana	cytosol	28.85	31.56
OQU84112	Sorghum	cytosol	31.35	31.52
CDY33040	Canola	nucleus	26.07	31.49
CDY06265	Canola	cytosol	30.1	31.45
OQU84114	Sorghum	mitochondrion	20.8	31.32
Bra031580.1-P	Field mustard	cytosol	29.96	31.3
AT1G07520.3	Thale cress	cytosol	30.1	31.18
KRH10243	Soybean	nucleus	28.71	31.13
EES01740	Sorghum	cytosol	34.54	30.86
OQU90003	Sorghum	cytosol	33.01	30.83
KRH23090	Soybean	vacuole	26.49	30.76
KRH23089	Soybean	cytosol	27.46	30.75
KXG29223	Sorghum	cytosol	30.24	30.66
CDY09912	Canola	cytosol	29.68	30.57
OQU83978	Sorghum	mitochondrion	26.77	30.49
OQU83979	Sorghum	plastid	25.52	30.31
KXG29232	Sorghum	cytosol	28.57	30.29
KXG29224	Sorghum	nucleus	28.99	30.16
EES09053	Sorghum	cytosol	26.77	30.16
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	26.49	30.08
CDX68388	Canola	cytosol	17.2	29.95
VIT_06s0004g04960.t01	Wine grape	nucleus	33.01	29.86
AT1G07530.1	Thale cress	cytosol	31.76	29.78
OQU83980	Sorghum	cytosol	25.52	29.63
OQU81651	Sorghum	cytosol	28.29	29.14
CDY09911	Canola	nucleus	23.3	28.77
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	31.76	28.45
KXG36217	Sorghum	cytosol	31.9	27.71
EER97449	Sorghum	cytosol	18.45	24.31
EER95348	Sorghum	cytosol	16.92	22.76
EES18257	Sorghum	cytosol	17.34	22.2
KXG33821	Sorghum	cytosol	17.34	21.97
EER97346	Sorghum	cytosol	17.34	21.93
EES05727	Sorghum	cytosol	14.56	16.69
EES12703	Sorghum	cytosol, nucleus, plastid	13.18	14.57

Protein Annotations

MapMan:15.5.12	UniProt:C5WT94	EnsemblPlants:EER91260	ProteinID:EER91260	ProteinID:EER91260.2	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR005202	PFAM:PF03514	PFscan:PS50985	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60	EnsemblPlantsGene:SORBI_3001G174100
InterPro:TF_GRAS	UniParc:UPI00081ACB72	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:14645723..14648813

Molecular Weight (calculated)

81949.8 Da

IEP (calculated)

6.732

GRAVY (calculated)

-0.502

Length

721 amino acids

Sequence
(BLAST)

001: MESKDKSNSS FEDSPSTVNN PGCYATSQKF IDNPTNEHND LELCLHTPNP TVSSNSNSNG HVASSTSSSA KIGPHPYEVS SNVESDWYRT NVTDYSANSW
101: IASDVTLNYI NNLLMQEDSD DRVRLHHGEY ALRAMEEPFN KLLGQNNPAY PHRLCNCDHL KNINDSVSKS CSICSVAIDS TTSHSNHNLQ AFETPWSLSD
201: IVKERKKFTQ STHIMELGLN VDGLSIAEKR SRDDQSLQVS VVDKSNHASS EIHSGSYSRT EDFHLLEERS SKQFAVSFNG TTRDEMLDRV LLFSGHKLTN
301: EGIIFREMMT NKSTRNSQND QGRTSARWKT RVMKQHKKEV VDLRKLLIRC AQEVSVNDYT LASDRLNIIR QHSSVTGDDT QRLASCLVNC LEVRLAGTGG
401: QLYHKLMTET CNAVNTLKVY QLALAVSPFL RVPYYFSNKT IIDVSKGKPK VHIIDFGICF GFQWPSLFEQ FAGMEDGPPK VRITGIDLPQ PGFRPNQMNK
501: NAGQLLADYA SMFNVPFEYK GISSKWETIC IQDLNIEEDD VLIVNCLYRM KNLGDETVYF NCARDKVLNI IRMMKPKVFV HGVVNGSYST PFFLTRFKEV
601: MYHYSALFDI LDRTVPRDNE ARMILERDIY QCAILNAVAC EGSERIERPE SYKNWKLRNL KAGLEQLPLD PDIVKVIRDT MGQYHKDYVV DVDDQWLVLG
701: WKGRILRAIS TWKPSESYDG N

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.