CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91406	Sorghum	nucleus	88.19	80.88
Zm00001d033166_P001	Maize	nucleus	82.65	77.46
KXG38064	Sorghum	nucleus	69.97	66.67
EER91260	Sorghum	nucleus	69.97	66.57
HORVU3Hr1G012520.1	Barley	cytosol	42.71	64.25
HORVU3Hr1G012550.6	Barley	cytosol	52.48	60.4
TraesCS3D01G067900.1	Wheat	nucleus	54.66	54.35
TraesCS3A01G068000.1	Wheat	nucleus	55.39	53.07
TraesCS3D01G067800.1	Wheat	nucleus	52.04	52.81
TraesCS3D01G067700.1	Wheat	cytosol	55.54	52.77
TraesCS3A01G067900.1	Wheat	cytosol	55.25	52.49
TraesCS3B01G081100.1	Wheat	nucleus	54.66	52.45
CDX68389	Canola	cytosol	6.41	51.76
Solyc04g011630.1.1	Tomato	cytosol	12.83	51.76
TraesCS3B01G080900.1	Wheat	nucleus	54.08	51.46
TraesCS3B01G081000.1	Wheat	cytosol	53.35	50.27
KXG21080	Sorghum	cytosol	40.96	44.89
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	20.55	44.48
KXG38103	Sorghum	cytosol	40.52	44.41
CDX80265	Canola	endoplasmic reticulum, golgi	20.41	44.16
KXG21079	Sorghum	cytosol	40.09	44.14
VIT_06s0004g04990.t01	Wine grape	cytosol	27.41	42.53
GSMUA_Achr8P02550_001	Banana	nucleus	23.03	40.31
OQU92829	Sorghum	cytosol	41.69	38.96
PGSC0003DMT400049420	Potato	cytosol	37.61	38.86
PGSC0003DMT400005480	Potato	cytosol	27.41	38.6
EES18882	Sorghum	cytosol	40.23	37.65
VIT_13s0019g01780.t01	Wine grape	nucleus	32.65	37.33
EES18880	Sorghum	cytosol	40.09	37.11
KRH10240	Soybean	cytosol	32.51	36.8
CDY71578	Canola	nucleus, plastid	27.84	36.66
GSMUA_Achr6P34090_001	Banana	nucleus	32.51	36.44
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	37.61	36.39
KXG37250	Sorghum	cytosol	34.4	36.25
Bra015584.1-P	Field mustard	cytosol	22.59	35.55
VIT_06s0004g04970.t01	Wine grape	cytosol	33.82	35.26
KRH24780	Soybean	cytosol	33.67	35.0
CDY47877	Canola	nucleus	31.49	34.95
KRH23095	Soybean	cytosol	33.38	34.86
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	31.92	34.76
KRH29773	Soybean	cytosol	31.05	34.69
Bra028391.1-P	Field mustard	nucleus	31.34	34.68
VIT_06s0004g04980.t01	Wine grape	nucleus	35.57	34.66
CDY39530	Canola	cytosol	31.2	34.57
VIT_13s0019g01710.t01	Wine grape	cytosol	36.44	34.39
PGSC0003DMT400016258	Potato	cytosol	36.44	34.34
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	33.67	34.32
CDY07777	Canola	cytosol, nucleus, peroxisome	33.67	34.32
CDX79750	Canola	peroxisome	33.67	34.27
KRH23094	Soybean	cytosol	27.55	34.18
Solyc09g010920.1.1	Tomato	cytosol	37.9	34.17
AT3G46600.1	Thale cress	cytosol	28.86	33.96
PGSC0003DMT400022997	Potato	cytosol, plastid	37.61	33.9
Solyc10g086530.1.1	Tomato	cytosol	37.61	33.9
Bra033813.1-P	Field mustard	nucleus	28.72	33.85
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.78	33.75
KRH65839	Soybean	cytosol, plastid	35.86	33.7
VIT_13s0019g01810.t01	Wine grape	cytosol	36.73	33.69
OQU83981	Sorghum	cytosol	24.34	33.6
OQU84115	Sorghum	cytosol	23.76	33.47
KRH29774	Soybean	cytosol	30.76	33.44
VIT_13s0019g01700.t01	Wine grape	cytosol	36.88	33.29
VIT_06s0004g04950.t01	Wine grape	cytosol	36.59	33.29
KRH49113	Soybean	cytosol	35.57	33.24
VIT_13s0019g01790.t01	Wine grape	cytosol	34.84	33.24
OQU84120	Sorghum	nucleus	30.61	33.12
KRG99969	Soybean	cytosol	35.42	32.97
AT5G59450.1	Thale cress	nucleus	29.3	32.95
CDX82987	Canola	nucleus	28.86	32.95
CDY33040	Canola	nucleus	28.57	32.83
KRH29771	Soybean	cytosol	32.51	32.79
AT2G37650.1	Thale cress	cytosol	34.26	32.73
PGSC0003DMT400077972	Potato	cytosol	35.86	32.71
KRH24773	Soybean	nucleus	32.65	32.61
KXG29228	Sorghum	cytosol	29.3	32.47
Solyc01g100200.2.1	Tomato	nucleus	31.49	32.43
CDX86475	Canola	nucleus	33.53	32.39
KRH29775	Soybean	nucleus	31.78	32.39
Solyc06g076280.1.1	Tomato	cytosol	35.28	32.35
KXG29219	Sorghum	cytosol	32.36	32.22
GSMUA_AchrUn_...	Banana	cytosol	30.9	32.17
CDY47878	Canola	nucleus	32.36	32.13
KRH24775	Soybean	cytosol	31.78	32.06
EES16206	Sorghum	cytosol	34.11	32.05
Solyc05g053090.1.1	Tomato	cytosol	34.69	32.03
CDY06266	Canola	cytosol	29.45	31.96
OQU84113	Sorghum	cytosol, nucleus, plastid	29.74	31.92
OQU84105	Sorghum	cytosol	33.97	31.92
Bra028390.1-P	Field mustard	cytosol	32.8	31.87
PGSC0003DMT400069949	Potato	cytosol	34.69	31.86
Solyc06g082530.1.1	Tomato	cytosol	30.32	31.85
KRH24778	Soybean	nucleus	31.34	31.8
OQU84111	Sorghum	cytosol	31.2	31.75
OQU84114	Sorghum	mitochondrion	22.16	31.73
AT2G29060.1	Thale cress	cytosol	31.92	31.56
EES01740	Sorghum	cytosol	37.03	31.47
CDX77228	Canola	cytosol	30.76	31.4
PGSC0003DMT400078286	Potato	nucleus	30.47	31.33
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	33.82	31.22
OQU84112	Sorghum	cytosol	32.36	30.96
Bra035653.1-P	Field mustard	cytosol	32.51	30.89
KRH10241	Soybean	cytosol, nucleus, peroxisome	30.9	30.81
KRH29779	Soybean	cytosol	33.24	30.73
OQU84116	Sorghum	nucleus	27.7	30.69
KRH10243	Soybean	nucleus	29.74	30.68
CDY31749	Canola	cytosol	32.36	30.58
CDY15616	Canola	nucleus	31.78	30.49
Bra030688.1-P	Field mustard	nucleus	32.94	30.42
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	28.13	30.39
KXG26392	Sorghum	cytosol	27.99	30.28
Bra031581.1-P	Field mustard	cytosol	29.45	30.24
CDY06265	Canola	cytosol	30.32	30.14
Bra031580.1-P	Field mustard	cytosol	30.17	30.0
AT1G07520.3	Thale cress	cytosol	30.32	29.89
KXG29232	Sorghum	cytosol	29.59	29.85
VIT_06s0004g04960.t01	Wine grape	nucleus	34.55	29.74
EES09053	Sorghum	cytosol	27.7	29.69
OQU90003	Sorghum	cytosol	33.38	29.66
KRH23089	Soybean	cytosol	27.7	29.5
CDY09912	Canola	cytosol	30.03	29.43
OQU83979	Sorghum	plastid	25.95	29.32
KRH23090	Soybean	vacuole	26.53	29.31
CDX68388	Canola	cytosol	17.64	29.23
KXG29224	Sorghum	nucleus	29.45	29.15
KXG29223	Sorghum	cytosol	30.17	29.11
OQU83978	Sorghum	mitochondrion	26.82	29.07
AT1G07530.1	Thale cress	cytosol	32.51	29.0
OQU83980	Sorghum	cytosol	26.09	28.82
OQU81651	Sorghum	cytosol	28.86	28.29
KXG36217	Sorghum	cytosol	32.8	27.11
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	31.78	27.08
CDY09911	Canola	nucleus	22.74	26.71
EER97449	Sorghum	cytosol	20.26	25.41
EER95348	Sorghum	cytosol	18.22	23.32
EES18257	Sorghum	cytosol	19.1	23.27
KXG33821	Sorghum	cytosol	18.95	22.85
EER97346	Sorghum	cytosol	18.51	22.28
EES05727	Sorghum	cytosol	15.6	17.01
EES12703	Sorghum	cytosol, nucleus, plastid	14.29	15.03

Protein Annotations

EnsemblPlants:OQU91407	EnsemblPlantsGene:SORBI_3001G174500	EntrezGene:8062981	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS
PANTHER:PTHR31636	PANTHER:PTHR31636:SF60	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU91407	ProteinID:OQU91407.1
RefSeq:XP_002466850.1	UniParc:UPI0001A82CCE	UniProt:A0A1Z5S640	MapMan:15.5.12	:	:

Description

hypothetical protein

Coordinates

chr1:-:14668939..14672591

Molecular Weight (calculated)

78068.1 Da

IEP (calculated)

6.673

GRAVY (calculated)

-0.513

Length

686 amino acids

Sequence
(BLAST)

001: MHHYPTVSNT FSDSDHITLS TSYSSTIDGP QFSDLSSNAA PDWYGTSVAD SSNNSWTNSD ITINYLNKLL MDEDDDDKVK LHHGECAVRA MEEPFYRILG
101: QNNPAYPESP SLCSCGHLNN LNDSVNKSSE LSCSSCCVAI DSSKNHSNHN LQAFEAPWSL TDIVEERRHS TEGTQNMELG VKIDGLSIAE KRRRDNHSFQ
201: VNAADTSKHA SSEVHSGYYP CTEDSYLSEA SSSKHVAYSF NGPIRDEMFD RVLLFAEHKP TDEAIVLQQM MTNKSTEHSQ NEQGRTSAQW RTRGKKQQKK
301: EVVDLRTILI HCAQAVSVNN HTLANDMLNI IRHHSSITGD DTQRLAFYLV DCLEVRLAGT GSQLYRKLLT KICNPMGILK VFQLTLAVNP LPRASFYFAN
401: KTILDVSKGK SKVHIIDFGI YFGFQWPSLF EQLAKREDGP PKVRITGIEL PKQGFRPNQM NKQNTGQRLA DYASMFNVPF EYQAISSKWE TICIEDLNIE
501: EDDVLIVNCI YRMKSVGDET ISINSARNRV LNTIRMMKPK VFVHGIVNGS YSTPFFLTRF KEVMYHYSAL FDIFDKTVPR DHETRMLIER GIFQCQLLNV
601: IACEGSERIE RPENYKKWKS RNLNAGLEQL PLNPDIVKVI REMVGKYHKD YVINEDDHWL LLGWKGRILN AISTWKPSES YDGDKT

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.