CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG38103	Sorghum	cytosol	88.12	87.7
KXG21080	Sorghum	cytosol	67.74	67.41
Solyc04g011630.1.1	Tomato	cytosol	15.57	57.06
CDX68389	Canola	cytosol	7.06	51.76
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	24.56	48.27
CDX80265	Canola	endoplasmic reticulum, golgi	24.24	47.63
VIT_06s0004g04990.t01	Wine grape	cytosol	32.58	45.93
GSMUA_Achr8P02550_001	Banana	nucleus	26.81	42.6
PGSC0003DMT400005480	Potato	cytosol	32.58	41.68
OQU92829	Sorghum	cytosol	47.51	40.33
EES18882	Sorghum	cytosol	47.19	40.11
OQU91407	Sorghum	nucleus	44.14	40.09
PGSC0003DMT400049420	Potato	cytosol	42.7	40.06
VIT_13s0019g01780.t01	Wine grape	nucleus	38.36	39.83
KRH10240	Soybean	cytosol	38.68	39.77
EES18880	Sorghum	cytosol	46.71	39.27
GSMUA_Achr6P34090_001	Banana	nucleus	38.2	38.89
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	43.98	38.65
CDY71578	Canola	nucleus, plastid	32.26	38.58
EER91260	Sorghum	nucleus	44.46	38.42
KRH23094	Soybean	cytosol	33.87	38.16
VIT_13s0019g01710.t01	Wine grape	cytosol	44.3	37.96
KRH29773	Soybean	cytosol	37.4	37.95
Bra015584.1-P	Field mustard	cytosol	26.32	37.61
KRG99969	Soybean	cytosol	44.46	37.58
KRH29774	Soybean	cytosol	38.04	37.56
KRH24780	Soybean	cytosol	39.65	37.42
KRH49113	Soybean	cytosol	43.98	37.33
KRH23095	Soybean	cytosol	39.33	37.29
KRH65839	Soybean	cytosol, plastid	43.66	37.26
PGSC0003DMT400016258	Potato	cytosol	43.5	37.23
KXG37250	Sorghum	cytosol	38.84	37.17
KXG38064	Sorghum	nucleus	42.86	37.08
CDY47877	Canola	nucleus	36.76	37.05
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	39.97	37.0
CDY39530	Canola	cytosol	36.76	37.0
PGSC0003DMT400069949	Potato	cytosol	44.3	36.95
Bra028391.1-P	Field mustard	nucleus	36.76	36.94
VIT_06s0004g04970.t01	Wine grape	cytosol	39.0	36.93
Solyc05g053090.1.1	Tomato	cytosol	43.98	36.88
CDY07777	Canola	cytosol, nucleus, peroxisome	39.81	36.85
CDX79750	Canola	peroxisome	39.81	36.8
VIT_13s0019g01810.t01	Wine grape	cytosol	43.98	36.63
KRH24775	Soybean	cytosol	39.97	36.62
OQU91406	Sorghum	nucleus	43.82	36.5
KRH29775	Soybean	nucleus	39.33	36.4
AT5G59450.1	Thale cress	nucleus	35.63	36.39
AT3G46600.1	Thale cress	cytosol	34.03	36.36
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	36.76	36.35
CDY33040	Canola	nucleus	34.83	36.35
KRH29771	Soybean	cytosol	39.65	36.32
OQU84115	Sorghum	cytosol	28.25	36.14
Bra033813.1-P	Field mustard	nucleus	33.71	36.08
Solyc10g086530.1.1	Tomato	cytosol	43.82	35.87
OQU83981	Sorghum	cytosol	28.57	35.81
VIT_06s0004g04980.t01	Wine grape	nucleus	40.45	35.8
CDX86475	Canola	nucleus	40.77	35.77
PGSC0003DMT400022997	Potato	cytosol, plastid	43.5	35.61
VIT_13s0019g01790.t01	Wine grape	cytosol	41.09	35.6
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	36.92	35.6
KRH24773	Soybean	nucleus	39.17	35.52
GSMUA_AchrUn_...	Banana	cytosol	37.56	35.51
CDY47878	Canola	nucleus	39.17	35.31
CDX82987	Canola	nucleus	34.03	35.27
KRH23089	Soybean	cytosol	36.44	35.25
Solyc09g010920.1.1	Tomato	cytosol	43.02	35.22
VIT_13s0019g01700.t01	Wine grape	cytosol	42.86	35.13
KRH24778	Soybean	nucleus	38.04	35.06
OQU84113	Sorghum	cytosol, nucleus, plastid	35.96	35.05
Bra028390.1-P	Field mustard	cytosol	39.65	34.99
KRH10243	Soybean	nucleus	37.24	34.89
AT2G29060.1	Thale cress	cytosol	38.84	34.87
EES01740	Sorghum	cytosol	44.78	34.57
VIT_06s0004g04950.t01	Wine grape	cytosol	41.73	34.48
Solyc01g100200.2.1	Tomato	nucleus	36.76	34.38
EES09053	Sorghum	cytosol	35.31	34.38
OQU84111	Sorghum	cytosol	37.08	34.27
AT2G37650.1	Thale cress	cytosol	39.49	34.26
Bra030688.1-P	Field mustard	nucleus	40.77	34.19
EES16206	Sorghum	cytosol	39.97	34.11
OQU84120	Sorghum	nucleus	34.67	34.07
Solyc06g082530.1.1	Tomato	cytosol	35.63	34.0
KXG29219	Sorghum	cytosol	37.56	33.96
PGSC0003DMT400077972	Potato	cytosol	40.93	33.91
Solyc06g076280.1.1	Tomato	cytosol	40.61	33.82
KRH23090	Soybean	vacuole	33.71	33.82
OQU84105	Sorghum	cytosol	39.17	33.42
KRH29779	Soybean	cytosol	39.65	33.29
CDY15616	Canola	nucleus	38.2	33.29
Bra035653.1-P	Field mustard	cytosol	38.52	33.24
CDY06266	Canola	cytosol	33.71	33.23
OQU84116	Sorghum	nucleus	32.91	33.12
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	39.49	33.11
CDY31749	Canola	cytosol	38.52	33.06
CDX77228	Canola	cytosol	35.63	33.04
KRH10241	Soybean	cytosol, nucleus, peroxisome	36.44	32.99
PGSC0003DMT400078286	Potato	nucleus	35.31	32.98
KXG29228	Sorghum	cytosol	32.42	32.63
AT1G07530.1	Thale cress	cytosol	40.13	32.51
KXG26392	Sorghum	cytosol	32.74	32.18
AT1G07520.3	Thale cress	cytosol	35.79	32.04
OQU83979	Sorghum	plastid	30.98	31.8
OQU84112	Sorghum	cytosol	36.44	31.66
CDY06265	Canola	cytosol	34.99	31.59
Bra031581.1-P	Field mustard	cytosol	33.87	31.59
Bra031580.1-P	Field mustard	cytosol	34.83	31.45
CDX68388	Canola	cytosol	20.87	31.4
OQU83980	Sorghum	cytosol	31.3	31.4
VIT_06s0004g04960.t01	Wine grape	nucleus	39.81	31.12
OQU83978	Sorghum	mitochondrion	31.46	30.96
OQU90003	Sorghum	cytosol	38.36	30.96
KXG29232	Sorghum	cytosol	33.71	30.88
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	31.46	30.87
OQU84114	Sorghum	mitochondrion	23.43	30.48
CDY09912	Canola	cytosol	34.19	30.43
KXG29224	Sorghum	nucleus	33.71	30.3
KXG29223	Sorghum	cytosol	34.35	30.1
OQU81651	Sorghum	cytosol	33.71	30.0
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	38.68	29.94
CDY09911	Canola	nucleus	26.16	27.91
KXG36217	Sorghum	cytosol	36.92	27.71
EER97449	Sorghum	cytosol	22.95	26.14
EER95348	Sorghum	cytosol	20.87	24.25
KXG33821	Sorghum	cytosol	21.67	23.73
EER97346	Sorghum	cytosol	21.51	23.51
EES18257	Sorghum	cytosol	21.19	23.45
EES05727	Sorghum	cytosol	17.82	17.65
EES12703	Sorghum	cytosol, nucleus, plastid	15.41	14.72

Protein Annotations

EnsemblPlants:KXG21079	EnsemblPlantsGene:SORBI_3009G011000	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF14	PFAM:PF03514	PFscan:PS50985	ProteinID:KXG21079	ProteinID:KXG21079.1	ProteinID:OQU77217.1
ProteinID:OQU77218.1	UniParc:UPI0003C644DE	UniProt:A0A1B6P5S0	MapMan:15.5.12	:	:

Description

hypothetical protein

Coordinates

chr9:-:1002477..1006297

Molecular Weight (calculated)

71100.6 Da

IEP (calculated)

5.912

GRAVY (calculated)

-0.461

Length

623 amino acids

Sequence
(BLAST)

001: MESPEYCEIN SNMTLDYINQ LLMDEGTDEK DSIYQQFDAL QAIEKPFYDI LGQTYPSSPK ETMISGDTEV DCPQDNYSKQ ARSGCFVNDV LGPQGTHLVT
101: HDWTSECDRL SLQFERGAEE ANKLVPSIVK LVDLDSNGLS DSNQMIEATI GQKGKHVSKI RSHVDLEFLE ARNSKHLAIS ASETTRDEMF DSVLLCDWQF
201: NCDAAHLREI KEKQANNSSQ NVWRKGYGQG QVKLRVKKEE GIDLRAHLMQ CAQAIVVNNL PFASDLLEKI RCHASPYGDG SQRLALYLAN GLDARLAGTG
301: SHVYQKLMEK RTRATDMLKA YRLFIAVCPF SKVAYYFSNQ TIVDLSNGRP KVHIIDFGIT LGFQWPSLIQ RFAKREGGPP KLRITGIDAP QPGFRPRAII
401: EATGKRLAEY AEMFNVPFEY QGIASQWEDI CIENLNIDND EVLIVNCMYR TKYLGDETED IDSARDRVLR TMKRINPEVL ILGVLNGLYS SPFFLPRFRE
501: VLFHYSALFD MLDATALRSH EDRIQLERDL FGPEALNVVA CEGAERIERP ETYKQWQVRC LKAGFKQLPV DKAILKRSID EKNKHYHEGF VIDEDSRWLL
601: QGWKGRIMHA VSSWKPKESY TNQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.