Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003553_P001 | Maize | cytosol | 79.81 | 83.36 |
| OQU84120 | Sorghum | nucleus | 53.0 | 53.0 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 47.79 | 51.88 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 48.27 | 50.66 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 46.85 | 50.25 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 50.32 | 50.0 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 49.68 | 48.99 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 50.63 | 47.56 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 49.84 | 47.38 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 47.16 | 46.28 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 46.69 | 46.03 |
| KXG29232 | Sorghum | cytosol | 49.37 | 46.03 |
| HORVU4Hr1G027480.1 | Barley | endoplasmic reticulum, extracellular, plasma membrane | 50.95 | 45.69 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 44.95 | 44.6 |
| OQU84116 | Sorghum | nucleus | 41.8 | 42.81 |
| KXG29219 | Sorghum | cytosol | 45.74 | 42.09 |
| OQU84111 | Sorghum | cytosol | 44.32 | 41.69 |
| OQU84105 | Sorghum | cytosol | 47.16 | 40.96 |
| OQU84115 | Sorghum | cytosol | 31.23 | 40.66 |
| OQU84114 | Sorghum | mitochondrion | 30.44 | 40.29 |
| EES09053 | Sorghum | cytosol | 40.54 | 40.16 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.08 | 39.64 |
| OQU84112 | Sorghum | cytosol | 44.48 | 39.33 |
| OQU83981 | Sorghum | cytosol | 30.76 | 39.24 |
| EES16206 | Sorghum | cytosol | 45.11 | 39.18 |
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 38.8 | 38.74 |
| KXG29228 | Sorghum | cytosol | 37.7 | 38.61 |
| KXG29223 | Sorghum | cytosol | 42.9 | 38.26 |
| KXG29224 | Sorghum | nucleus | 40.85 | 37.37 |
| OQU90003 | Sorghum | cytosol | 44.8 | 36.79 |
| OQU83980 | Sorghum | cytosol | 35.8 | 36.55 |
| OQU83978 | Sorghum | mitochondrion | 36.28 | 36.33 |
| OQU83979 | Sorghum | plastid | 34.7 | 36.24 |
| KXG36217 | Sorghum | cytosol | 47.32 | 36.14 |
| OQU84106 | Sorghum | cytosol, endoplasmic reticulum, plastid | 45.58 | 35.9 |
| OQU81651 | Sorghum | cytosol | 38.96 | 35.29 |
| KXG38103 | Sorghum | cytosol | 32.49 | 32.91 |
| OQU92829 | Sorghum | cytosol | 38.01 | 32.83 |
| KXG21079 | Sorghum | cytosol | 32.18 | 32.74 |
| KXG37250 | Sorghum | cytosol | 33.28 | 32.41 |
| KXG21080 | Sorghum | cytosol | 31.55 | 31.95 |
| EES01740 | Sorghum | cytosol | 37.38 | 29.37 |
| EER91260 | Sorghum | nucleus | 32.65 | 28.71 |
| OQU91407 | Sorghum | nucleus | 30.28 | 27.99 |
| KXG38064 | Sorghum | nucleus | 31.55 | 27.78 |
| EES18882 | Sorghum | cytosol | 31.7 | 27.42 |
| OQU91406 | Sorghum | nucleus | 31.55 | 26.74 |
| EES18880 | Sorghum | cytosol | 31.23 | 26.72 |
| EER97449 | Sorghum | cytosol | 21.61 | 25.05 |
| EER95348 | Sorghum | cytosol | 19.87 | 23.51 |
| EER97346 | Sorghum | cytosol | 19.4 | 21.58 |
| KXG33821 | Sorghum | cytosol | 18.77 | 20.91 |
| EES18257 | Sorghum | cytosol | 18.45 | 20.78 |
| EES05727 | Sorghum | cytosol | 17.35 | 17.49 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 16.09 | 15.64 |
Protein Annotations
| MapMan:15.5.12 | UniProt:A0A1B6PL35 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | EnsemblPlants:KXG26392 | ProteinID:KXG26392 |
| ProteinID:KXG26392.1 | PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF27 | EnsemblPlantsGene:SORBI_3006G093700 |
| InterPro:TF_GRAS | UniParc:UPI0003C726B6 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:46379898..46381802
Molecular Weight (calculated)
69694.7 Da
IEP (calculated)
5.811
GRAVY (calculated)
-0.333
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTAALPRS FSNHLCPTLH LDGSQDDNVL PFIARMLMED DAVDEFLYQQ YPDHNPALLQ TQQLFAQVLF DTSSTSALAA VQAGAQGNDL QDPPSLNSTA
101: MGAVEPANTL SPAEGSNCFK DAVSMAFLRG MEEANKFLPG AGGGYTADFR GRKKRLDVDG DDEQVEGRSS KQMAADGDEE SEEAAVREML DKLMLNGDDE
201: PILADDMQEL RAAMDMAKTP PPPGRPAGTR ADQVQQQQAV DVDLHSMLIR CADAVANNDR RTASDLLQRI RRHSSPSGDA TKRLAHYLAE ALEVRLNGTG
301: SLQYRPSSVM AKNASSAGVQ LKAQQFFMAS CCFLPVNILF SNKTIYNAAA GRKKLHIVHY GLDHGLQWAT LLRWLARREG GPPEVRLTGI DVPQPGFRPA
401: RLIEEAGRRL TTCARQLGVP FRFRGIAARS EAVRAGDLGI DDPDEVLVVS SLFHFRTLTD EGTVAADGGE AGADPIGAVL GAIREMKPSV FVHAVLNASY
501: STAFFATRFR EALYNFTALF DMMDTILPRD NGRRLLFERD VLARSAVNVI ACEGADRVQH PRSYKQWQAR SRRAGLRQLP LDCDIVQMLK DKVKRGYHEN
601: FVITEDQQWL LQAWKGRVLY AISTWTAGNE LAGT
101: MGAVEPANTL SPAEGSNCFK DAVSMAFLRG MEEANKFLPG AGGGYTADFR GRKKRLDVDG DDEQVEGRSS KQMAADGDEE SEEAAVREML DKLMLNGDDE
201: PILADDMQEL RAAMDMAKTP PPPGRPAGTR ADQVQQQQAV DVDLHSMLIR CADAVANNDR RTASDLLQRI RRHSSPSGDA TKRLAHYLAE ALEVRLNGTG
301: SLQYRPSSVM AKNASSAGVQ LKAQQFFMAS CCFLPVNILF SNKTIYNAAA GRKKLHIVHY GLDHGLQWAT LLRWLARREG GPPEVRLTGI DVPQPGFRPA
401: RLIEEAGRRL TTCARQLGVP FRFRGIAARS EAVRAGDLGI DDPDEVLVVS SLFHFRTLTD EGTVAADGGE AGADPIGAVL GAIREMKPSV FVHAVLNASY
501: STAFFATRFR EALYNFTALF DMMDTILPRD NGRRLLFERD VLARSAVNVI ACEGADRVQH PRSYKQWQAR SRRAGLRQLP LDCDIVQMLK DKVKRGYHEN
601: FVITEDQQWL LQAWKGRVLY AISTWTAGNE LAGT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.