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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d034664_P001 Maize plastid 76.96 89.62
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 65.44 66.98
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 61.75 62.42
Solyc04g011630.1.1 Tomato cytosol 16.13 61.76
TraesCS5B01G494500.1 Wheat cytosol 62.06 61.49
TraesCS5D01G494900.1 Wheat cytosol 62.06 61.49
TraesCS5A01G481300.1 Wheat cytosol 61.75 61.37
CDX68389 Canola cytosol 7.37 56.47
Bra002564.1-P Field mustard endoplasmic reticulum, golgi 25.35 52.05
CDX80265 Canola endoplasmic reticulum, golgi 25.19 51.73
VIT_06s0004g04990.t01 Wine grape cytosol 34.41 50.68
PGSC0003DMT400005480 Potato cytosol 35.02 46.82
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 47.62 43.72
AT3G46600.1 Thale cress cytosol 37.79 42.2
PGSC0003DMT400049420 Potato cytosol 43.01 42.17
VIT_06s0004g04970.t01 Wine grape cytosol 41.94 41.49
Bra033813.1-P Field mustard nucleus 36.87 41.24
KRH29771 Soybean cytosol 42.4 40.59
KRH29773 Soybean cytosol 38.25 40.55
KRH65839 Soybean cytosol, plastid 45.47 40.55
OQU92829 Sorghum cytosol 45.62 40.46
VIT_06s0004g04980.t01 Wine grape nucleus 43.63 40.34
Solyc06g082530.1.1 Tomato cytosol 40.4 40.28
KRH10240 Soybean cytosol 37.33 40.1
Solyc10g086530.1.1 Tomato cytosol 46.85 40.08
VIT_13s0019g01810.t01 Wine grape cytosol 45.93 39.97
PGSC0003DMT400063769 Potato cytosol, nucleus, peroxisome 39.63 39.94
CDX82987 Canola nucleus 36.87 39.93
KRH24773 Soybean nucleus 42.09 39.88
KXG38103 Sorghum cytosol 38.1 39.62
PGSC0003DMT400078286 Potato nucleus 40.55 39.58
CDY33040 Canola nucleus 36.25 39.53
PGSC0003DMT400022997 Potato cytosol, plastid 46.08 39.42
KRH49113 Soybean cytosol 44.39 39.37
PGSC0003DMT400016258 Potato cytosol 43.93 39.29
KRH24780 Soybean cytosol 39.78 39.24
KRG99969 Soybean cytosol 44.39 39.21
KXG21080 Sorghum cytosol 37.63 39.14
KRH24775 Soybean cytosol 40.86 39.12
Solyc09g010920.1.1 Tomato cytosol 45.62 39.03
KRH29774 Soybean cytosol 37.79 38.99
KXG21079 Sorghum cytosol 37.17 38.84
VIT_13s0019g01780.t01 Wine grape nucleus 35.79 38.83
KRH23095 Soybean cytosol 39.17 38.81
KRH29775 Soybean nucleus 39.78 38.48
Solyc01g100200.2.1 Tomato nucleus 39.32 38.44
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 39.63 38.34
CDY07777 Canola cytosol, nucleus, peroxisome 39.63 38.34
CDX79750 Canola peroxisome 39.63 38.28
AT5G59450.1 Thale cress nucleus 35.64 38.03
CDY71578 Canola nucleus, plastid 30.41 38.0
VIT_13s0019g01700.t01 Wine grape cytosol 44.24 37.89
VIT_06s0004g04950.t01 Wine grape cytosol 43.78 37.8
OQU84113 Sorghum cytosol, nucleus, plastid 37.02 37.72
VIT_13s0019g01710.t01 Wine grape cytosol 41.94 37.55
KRH23094 Soybean cytosol 31.8 37.43
KRH24778 Soybean nucleus 38.71 37.28
PGSC0003DMT400069949 Potato cytosol 42.7 37.22
AT2G37650.1 Thale cress cytosol 41.01 37.19
Solyc06g076280.1.1 Tomato cytosol 42.7 37.17
Solyc05g053090.1.1 Tomato cytosol 42.4 37.15
KRH29779 Soybean cytosol 42.09 36.93
VIT_13s0019g01790.t01 Wine grape cytosol 40.71 36.86
CDX86475 Canola nucleus 40.09 36.76
KRH23091 Soybean endoplasmic reticulum, plasma membrane 41.94 36.74
CDY47877 Canola nucleus 34.87 36.73
Bra015584.1-P Field mustard cytosol 24.58 36.7
CDY39530 Canola cytosol 34.87 36.67
PGSC0003DMT400077972 Potato cytosol 42.24 36.57
KRH10243 Soybean nucleus 37.33 36.54
Bra028391.1-P Field mustard nucleus 34.72 36.45
KRH10241 Soybean cytosol, nucleus, peroxisome 38.4 36.34
CDX68388 Canola cytosol 23.04 36.23
KRH23089 Soybean cytosol 35.79 36.18
EES01740 Sorghum cytosol 44.7 36.06
AT2G29065.1 Thale cress cytosol, nucleus, plastid 34.56 35.71
OQU83981 Sorghum cytosol 27.19 35.61
KRH23090 Soybean vacuole 33.95 35.59
CDX77228 Canola cytosol 36.71 35.57
OQU84111 Sorghum cytosol 36.71 35.46
AT2G29060.1 Thale cress cytosol 37.79 35.45
CDY06266 Canola cytosol 34.1 35.13
OQU84120 Sorghum nucleus 34.1 35.02
KXG29219 Sorghum cytosol 37.02 34.98
OQU84114 Sorghum mitochondrion 25.65 34.86
EES16206 Sorghum cytosol 39.02 34.79
CDY47878 Canola nucleus 36.87 34.73
OQU84105 Sorghum cytosol 38.86 34.66
Bra030688.1-P Field mustard nucleus 39.48 34.59
OQU91407 Sorghum nucleus 36.25 34.4
CDY15616 Canola nucleus 37.48 34.13
Bra035653.1-P Field mustard cytosol 37.79 34.07
AT1G07530.1 Thale cress cytosol 40.25 34.07
VIT_06s0004g04960.t01 Wine grape nucleus 41.63 34.0
Bra028390.1-P Field mustard cytosol 36.87 33.99
CDY31749 Canola cytosol 37.79 33.88
OQU84112 Sorghum cytosol 37.17 33.75
Bra031581.1-P Field mustard cytosol 34.56 33.68
OQU84115 Sorghum cytosol 25.19 33.68
EES09053 Sorghum cytosol 32.87 33.44
KXG26392 Sorghum cytosol 32.41 33.28
OQU84116 Sorghum nucleus 31.64 33.28
EES18882 Sorghum cytosol 37.02 32.88
KXG29228 Sorghum cytosol 30.88 32.47
AT1G07520.3 Thale cress cytosol 34.26 32.04
CDY06265 Canola cytosol 33.95 32.03
Bra031580.1-P Field mustard cytosol 33.79 31.88
OQU90003 Sorghum cytosol 37.79 31.87
CDY09912 Canola cytosol 34.26 31.86
KXG29232 Sorghum cytosol 33.18 31.76
KXG29224 Sorghum nucleus 33.49 31.46
EES18880 Sorghum cytosol 35.79 31.44
KXG36217 Sorghum cytosol 39.94 31.33
OQU84119 Sorghum cytosol, extracellular, mitochondrion, plastid 30.41 31.18
OQU91406 Sorghum nucleus 35.64 31.02
KXG29223 Sorghum cytosol 33.79 30.94
OQU83980 Sorghum cytosol 29.49 30.92
OQU83979 Sorghum plastid 28.73 30.81
EER91260 Sorghum nucleus 33.79 30.51
KXG38064 Sorghum nucleus 33.64 30.42
CDY09911 Canola nucleus 27.19 30.31
OQU84106 Sorghum cytosol, endoplasmic reticulum, plastid 36.1 29.19
OQU83978 Sorghum mitochondrion 27.96 28.75
OQU81651 Sorghum cytosol 30.11 28.0
EER97449 Sorghum cytosol 22.43 26.69
EER95348 Sorghum cytosol 20.43 24.81
EER97346 Sorghum cytosol 19.66 22.46
EES18257 Sorghum cytosol 18.89 21.85
KXG33821 Sorghum cytosol 18.59 21.27
EES05727 Sorghum cytosol 17.67 18.28
EES12703 Sorghum cytosol, nucleus, plastid 16.59 16.56
Protein Annotations
EnsemblPlants:KXG37250EnsemblPlantsGene:SORBI_3001G033200GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRASPANTHER:PTHR31636
PANTHER:PTHR31636:SF23PFAM:PF03514PFscan:PS50985ProteinID:KXG37250ProteinID:KXG37250.1ProteinID:KXG37251.1
SEG:segUniParc:UPI00081AE20AUniProt:A0A1B6QH73MapMan:15.5.12::
Description
hypothetical protein
Coordinates
chr1:-:2499310..2503376
Molecular Weight (calculated)
73399.0 Da
IEP (calculated)
7.342
GRAVY (calculated)
-0.467
Length
651 amino acids
Sequence
(BLAST)
001: MIMDPRPRDN LNFGARLPTP NPPTPHMISF SLQQPQPQFF PSYGFHSHNH NNPAISSHPS PPSVMPGCTT PSPASTTTTE ADNAEDLSEA VADDAVLAYI
101: NQFLLEDEDE ESYPVTSVPV EDSVLLAAVE KPFVDILKSA NHITAKAYEV KSWITDDCHS TGSGRFHDVV TSTLDSTQLA PEMVQGDVVD AVHKGQKNPR
201: DNDLEVERRK SKQSALCDEE TVREMFDKVL LCTDKNCAFH SPMPADAQNS GGYVKGSGNR RGRRKGRSGA GAEQEPVDLT TLLIHCAQAA AIDDHRNSSE
301: HLKQIRKHSS ATGDAGQRLA HYFADGLEAR LAGTGSSIYR SLAAKRTSTG DMLKAFNLYV KACPFRIISH YVANTTILNA TKSVTRLHII DYGIMYGFQW
401: PILMQRLSKR SGGPPTLRIT GIDFPLSGFR PAERVEATGR RLHEYARMFN VPFEYQAIAA KWDTIQVKDL NIKSDEFIVV NCLYRMRNMM DETATDDSPR
501: TRVLNTIRKL NPHLFVHGIV NGTYNAPFFV TRFKEAMFFF SSIFDMLEAN ASRMDEHRLL IEREFFGREA INVIACEGTE RIERPETYKQ WQMRNLRAGF
601: RQLPLDREIM ARARYKVSKT YPRDFLVDED NKWMLQGWKG RVIYALSAWS T
Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.