CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU84115	Sorghum	cytosol	38.43	55.24
KXG29228	Sorghum	cytosol	47.57	53.8
OQU83981	Sorghum	cytosol	37.14	52.31
OQU83979	Sorghum	plastid	42.71	49.26
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	43.29	47.72
OQU83980	Sorghum	cytosol	41.57	46.86
OQU83978	Sorghum	mitochondrion	42.0	46.45
Os11t0706200-00	Rice	nucleus	38.86	45.87
KXG29219	Sorghum	cytosol	40.43	41.07
OQU84105	Sorghum	cytosol	42.71	40.96
OQU84116	Sorghum	nucleus	35.71	40.39
OQU84113	Sorghum	cytosol, nucleus, plastid	36.86	40.38
OQU84111	Sorghum	cytosol	38.71	40.21
OQU84120	Sorghum	nucleus	35.57	39.27
KXG26392	Sorghum	cytosol	35.29	38.96
EES09053	Sorghum	cytosol	35.57	38.91
GSMUA_Achr5P08320_001	Banana	cytosol	24.86	38.75
OQU84114	Sorghum	mitochondrion	26.43	38.62
OQU84112	Sorghum	cytosol	39.14	38.21
KXG29224	Sorghum	nucleus	36.71	37.09
OQU90003	Sorghum	cytosol	40.29	36.53
EES16206	Sorghum	cytosol	38.0	36.44
KXG29223	Sorghum	cytosol	36.57	36.01
KXG29232	Sorghum	cytosol	34.71	35.74
KXG36217	Sorghum	cytosol	40.86	34.46
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	39.57	34.41
KXG21079	Sorghum	cytosol	30.0	33.71
KXG38103	Sorghum	cytosol	29.71	33.23
KXG21080	Sorghum	cytosol	29.14	32.59
OQU92829	Sorghum	cytosol	32.86	31.34
KXG37250	Sorghum	cytosol	28.0	30.11
OQU91407	Sorghum	nucleus	28.29	28.86
EES01740	Sorghum	cytosol	33.0	28.62
KXG38064	Sorghum	nucleus	29.14	28.33
EER91260	Sorghum	nucleus	29.14	28.29
OQU91406	Sorghum	nucleus	29.43	27.54
EES18882	Sorghum	cytosol	28.29	27.01
EES18880	Sorghum	cytosol	28.43	26.86
EER95348	Sorghum	cytosol	17.57	22.95
EER97449	Sorghum	cytosol	17.43	22.3
KXG33821	Sorghum	cytosol	16.71	20.56
EER97346	Sorghum	cytosol	16.29	20.0
EES05727	Sorghum	cytosol	17.14	19.08
EES18257	Sorghum	cytosol	14.86	18.47
EES12703	Sorghum	cytosol, nucleus, plastid	16.71	17.94

Protein Annotations

EnsemblPlants:OQU81651	EnsemblPlantsGene:SORBI_3006G093800	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU81651	ProteinID:OQU81651.1	SEG:seg
UniParc:UPI000B8BB020	UniProt:A0A1Z5RDS5	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:46383534..46386286

Molecular Weight (calculated)

78442.7 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.371

Length

700 amino acids

Sequence
(BLAST)

001: MEPSAPSPSV FHNGEGPLSP DNMVHSYISH MLLEENIDDQ ILCQYYDHPS LLQMQQDLAH ILSSPSSSAK NSTINNGNSE GTESLLHGSS GDPISVSLGF
101: DMGADVVGLL QMQQALAHIL SPPSSSTKNS SINKGNSEGT EGLLHGSSGD PTRVSLGFDK GADVAGAFLK GMEEGRKFLP SDNKGADVVG AFFKGMQEGR
201: QFLPRGNNLL KDDHMLQNSR ESSDQRGFKK SCNRCEHLEE VGRCNKCEHL EEVGRISKGM MMMEAPEEIG MQMFDDMSLC GYETFIRDME ILRIGMNNKV
301: VKNNRKGCSK VARDVVDLHT LLIHCAQAVD TSNLKIAVEL LKQIKQHASA TGDATQRLAL CFSKGLEVRL VGTGSQVSKL LMAERPSAVE FRKAYSLYIA
401: ACSFNKVAHI FSTRSIMQTM VGKNRLHIVD YDDVNYEFQW ADLIRLLANR NREGDPPEMK ITAISGSQPR SCPSQWIEEQ EHRLNMCASE FGIPFTFRVM
501: TMKREEVSIE NLNIDEDEVL VVNDIFNFSS LVGETAFFGD LSPRDTVLNN IRKMKPNIFI QSVLNCSHGT SFLSRFREAL FCYSTMFDML DAIVPRDSEQ
601: RLVLEQGMLG RWALNAIACD GVDLIDRPEK YRRWEVRNRR AGLRQLPLEP DIVKELKDMV KKHHHKNFLL SEDDQWLLQG WKGRILFAHS TWVADEASSE

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.