CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91407	Sorghum	nucleus	80.88	88.19
Zm00001d033166_P001	Maize	nucleus	82.35	84.15
KXG38064	Sorghum	nucleus	68.45	71.11
EER91260	Sorghum	nucleus	67.51	70.04
HORVU3Hr1G012520.1	Barley	cytosol	39.84	65.35
HORVU3Hr1G012550.6	Barley	cytosol	49.06	61.58
TraesCS3D01G067700.1	Wheat	cytosol	53.88	55.82
TraesCS3A01G067900.1	Wheat	cytosol	53.74	55.68
TraesCS3D01G067800.1	Wheat	nucleus	50.13	55.47
TraesCS3D01G067900.1	Wheat	nucleus	50.8	55.07
TraesCS3B01G080900.1	Wheat	nucleus	52.41	54.37
TraesCS3B01G081000.1	Wheat	cytosol	52.41	53.85
TraesCS3B01G081100.1	Wheat	nucleus	51.47	53.85
TraesCS3A01G068000.1	Wheat	nucleus	51.47	53.77
CDX68389	Canola	cytosol	5.48	48.24
Solyc04g011630.1.1	Tomato	cytosol	10.96	48.24
KXG21079	Sorghum	cytosol	36.5	43.82
KXG38103	Sorghum	cytosol	36.63	43.77
KXG21080	Sorghum	cytosol	36.23	43.29
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	18.05	42.59
CDX80265	Canola	endoplasmic reticulum, golgi	17.91	42.27
VIT_06s0004g04990.t01	Wine grape	cytosol	24.73	41.86
PGSC0003DMT400005480	Potato	cytosol	25.8	39.63
GSMUA_Achr8P02550_001	Banana	nucleus	20.72	39.54
PGSC0003DMT400049420	Potato	cytosol	34.76	39.16
OQU92829	Sorghum	cytosol	38.24	38.96
VIT_13s0019g01780.t01	Wine grape	nucleus	30.61	38.17
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	35.83	37.8
CDY71578	Canola	nucleus, plastid	25.8	37.04
EES18880	Sorghum	cytosol	36.63	36.98
EES18882	Sorghum	cytosol	36.23	36.97
KRH10240	Soybean	cytosol	29.81	36.8
GSMUA_Achr6P34090_001	Banana	nucleus	29.95	36.6
VIT_06s0004g04970.t01	Wine grape	cytosol	32.09	36.47
CDY47877	Canola	nucleus	29.81	36.08
KRH23095	Soybean	cytosol	31.68	36.07
Bra015584.1-P	Field mustard	cytosol	20.99	36.01
KRH24780	Soybean	cytosol	31.68	35.91
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	30.21	35.87
PGSC0003DMT400016258	Potato	cytosol	34.89	35.85
Bra028391.1-P	Field mustard	nucleus	29.68	35.81
CDY39530	Canola	cytosol	29.55	35.7
KXG37250	Sorghum	cytosol	31.02	35.64
VIT_06s0004g04980.t01	Wine grape	nucleus	33.42	35.51
Solyc10g086530.1.1	Tomato	cytosol	36.1	35.48
Solyc09g010920.1.1	Tomato	cytosol	35.96	35.35
VIT_13s0019g01710.t01	Wine grape	cytosol	34.22	35.21
PGSC0003DMT400022997	Potato	cytosol, plastid	35.7	35.09
KRH23094	Soybean	cytosol	25.8	34.9
VIT_13s0019g01810.t01	Wine grape	cytosol	34.89	34.89
VIT_06s0004g04950.t01	Wine grape	cytosol	35.16	34.88
KRH29773	Soybean	cytosol	28.61	34.85
KRH65839	Soybean	cytosol, plastid	33.96	34.79
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	31.28	34.77
CDY07777	Canola	cytosol, nucleus, peroxisome	31.28	34.77
CDX79750	Canola	peroxisome	31.28	34.72
VIT_13s0019g01790.t01	Wine grape	cytosol	33.29	34.63
OQU84115	Sorghum	cytosol	22.46	34.5
KRH29774	Soybean	cytosol	29.01	34.39
OQU83981	Sorghum	cytosol	22.73	34.21
KRH49113	Soybean	cytosol	33.56	34.2
KRG99969	Soybean	cytosol	33.69	34.19
Bra033813.1-P	Field mustard	nucleus	26.47	34.02
AT3G46600.1	Thale cress	cytosol	26.47	33.96
KRH24773	Soybean	nucleus	31.15	33.92
CDY47878	Canola	nucleus	31.15	33.72
CDY06266	Canola	cytosol	28.48	33.7
VIT_13s0019g01700.t01	Wine grape	cytosol	34.22	33.68
KXG29228	Sorghum	cytosol	27.81	33.6
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	29.01	33.59
Solyc06g076280.1.1	Tomato	cytosol	33.56	33.56
PGSC0003DMT400077972	Potato	cytosol	33.69	33.51
Bra028390.1-P	Field mustard	cytosol	31.55	33.43
CDX77228	Canola	cytosol	29.95	33.33
CDX86475	Canola	nucleus	31.55	33.24
KRH29771	Soybean	cytosol	30.21	33.24
AT2G37650.1	Thale cress	cytosol	31.82	33.15
KRH29775	Soybean	nucleus	29.81	33.14
CDX82987	Canola	nucleus	26.6	33.11
OQU84120	Sorghum	nucleus	27.94	32.97
OQU84105	Sorghum	cytosol	32.09	32.88
Solyc05g053090.1.1	Tomato	cytosol	32.62	32.84
KXG29219	Sorghum	cytosol	30.21	32.8
PGSC0003DMT400069949	Potato	cytosol	32.75	32.8
KRH24775	Soybean	cytosol	29.81	32.79
AT5G59450.1	Thale cress	nucleus	26.74	32.79
OQU84113	Sorghum	cytosol, nucleus, plastid	27.94	32.71
KRH24778	Soybean	nucleus	29.41	32.54
CDY33040	Canola	nucleus	25.94	32.5
Solyc01g100200.2.1	Tomato	nucleus	28.88	32.43
AT2G29060.1	Thale cress	cytosol	30.08	32.42
EES01740	Sorghum	cytosol	34.89	32.34
GSMUA_AchrUn_...	Banana	cytosol	28.48	32.32
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	32.09	32.3
Bra035653.1-P	Field mustard	cytosol	31.15	32.27
Solyc06g082530.1.1	Tomato	cytosol	28.07	32.16
Bra031581.1-P	Field mustard	cytosol	28.61	32.04
KRH10241	Soybean	cytosol, nucleus, peroxisome	29.41	31.98
CDY31749	Canola	cytosol	31.02	31.96
CDY06265	Canola	cytosol	29.41	31.88
AT1G07520.3	Thale cress	cytosol	29.55	31.75
Bra031580.1-P	Field mustard	cytosol	29.28	31.74
OQU84114	Sorghum	mitochondrion	20.32	31.73
KRH29779	Soybean	cytosol	31.42	31.67
PGSC0003DMT400078286	Potato	nucleus	28.21	31.63
KXG26392	Sorghum	cytosol	26.74	31.55
CDY15616	Canola	nucleus	30.08	31.47
OQU84111	Sorghum	cytosol	28.34	31.45
KRH10243	Soybean	nucleus	27.94	31.43
Bra030688.1-P	Field mustard	nucleus	31.15	31.36
CDY09912	Canola	cytosol	29.28	31.29
VIT_06s0004g04960.t01	Wine grape	nucleus	33.29	31.24
EES16206	Sorghum	cytosol	30.48	31.23
OQU84116	Sorghum	nucleus	25.67	31.02
KXG29232	Sorghum	cytosol	27.94	30.74
OQU84112	Sorghum	cytosol	29.28	30.54
OQU90003	Sorghum	cytosol	31.42	30.44
CDX68388	Canola	cytosol	16.84	30.43
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	25.67	30.24
OQU83979	Sorghum	plastid	24.47	30.15
KRH23089	Soybean	cytosol	25.94	30.12
KRH23090	Soybean	vacuole	24.87	29.95
OQU83978	Sorghum	mitochondrion	25.27	29.86
KXG29223	Sorghum	cytosol	28.07	29.54
EES09053	Sorghum	cytosol	25.27	29.53
OQU83980	Sorghum	cytosol	24.47	29.47
KXG29224	Sorghum	nucleus	27.27	29.44
OQU81651	Sorghum	cytosol	27.54	29.43
AT1G07530.1	Thale cress	cytosol	30.21	29.39
CDY09911	Canola	nucleus	22.33	28.6
KXG36217	Sorghum	cytosol	31.42	28.31
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	29.14	27.08
EER97449	Sorghum	cytosol	18.45	25.23
EES18257	Sorghum	cytosol	17.65	23.45
EER95348	Sorghum	cytosol	16.44	22.95
KXG33821	Sorghum	cytosol	17.25	22.67
EER97346	Sorghum	cytosol	16.84	22.11
EES05727	Sorghum	cytosol	14.17	16.85
EES12703	Sorghum	cytosol, nucleus, plastid	13.1	15.03

Protein Annotations

EnsemblPlants:OQU91406	EnsemblPlantsGene:SORBI_3001G174300	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF60	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU91406	ProteinID:OQU91406.1	SEG:seg
UniParc:UPI000B425FF9	UniProt:A0A1Z5S6H0	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:14658351..14662164

Molecular Weight (calculated)

84366.1 Da

IEP (calculated)

5.899

GRAVY (calculated)

-0.498

Length

748 amino acids

Sequence
(BLAST)

001: MGTCKALSDF WQGSRTPSME FNDKSSSNFE DFQSNMSATS GFYALVDPAD ESNDLESFLH QPRSKHHYPP VSNTFSDSDH ITLSTPYSST VDGPQFCDLS
101: SNAAPDWYGT SVADSSNNSW TNSDITIDYL NKLLMDEDDE DKVKLHHGEC ALRAMEEPFY RILGQNNPAY PESPSLCSCG HLNNLDDSIN KSSGLSCSSC
201: SVAIDSSNSH SNHNLQAFEA PWSLSDIVKE TKRSTEGTRN MEFGVKIDGL SIAEKRSRDN QSLQVNAADT SKHASSEVHS GYFSSTEDSY LSEARSSKQV
301: AFSFNEPTRD EMFDRVLLFS EHKPTDEAIV LQEMMTNKST GHSQNEQGRT SARRKTRGKK QQKKEVVDLR AILIHCAQAV SVNNHTLAND MLNIIRQHSS
401: ITGDDTQRLA FCLVDCLEVR LAGTGCQLYR KLITKSSNAV AILKVLQLSL AVNPLLRASF YFSNKTILDV SKGKSKVHII DFGICFGFQW PSLFEQLAKR
501: EDGPPKVRIT GIEQPMQGFR PNQMNKQNTG QRLADYASMF NVPFEYQAIS SMWETISIED LNIEEDDVLI VNCIDRMKIL GDETVSINSA RNKVLNTIRM
601: MKPKIFVHGV VNGSYGTPIF LTRFKEVMYH YSALFDIFDK TVPRDNETRL HIERSMFLSQ LLNVIACEGS ERIERPENYK KWKSRSLNAG LEQLPLNPDI
701: VEVIREMVGK YHKDYVIYED DQWLLLGWKG RILNGISTWK PSESYVGD

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.