Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 52.93 | 99.68 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 51.76 | 97.48 |
| AT5G59450.1 | Thale cress | nucleus | 81.41 | 79.67 |
| CDX68389 | Canola | cytosol | 10.55 | 74.12 |
| CDX82987 | Canola | nucleus | 63.82 | 63.39 |
| CDX68388 | Canola | cytosol | 41.88 | 60.39 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 33.67 | 45.48 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 45.39 | 41.95 |
| Solyc01g100200.2.1 | Tomato | nucleus | 46.06 | 41.29 |
| HORVU3Hr1G012520.1 | Barley | cytosol | 31.49 | 41.23 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 28.31 | 40.92 |
| Zm00001d034664_P001 | Maize | plastid | 36.85 | 39.36 |
| KRH10240 | Soybean | cytosol | 39.36 | 38.78 |
| KRH23095 | Soybean | cytosol | 41.37 | 37.6 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 44.22 | 37.5 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 41.04 | 37.23 |
| Solyc06g082530.1.1 | Tomato | cytosol | 40.37 | 36.91 |
| PGSC0003DMT400078286 | Potato | nucleus | 41.21 | 36.88 |
| CDY71578 | Canola | nucleus, plastid | 32.16 | 36.85 |
| Os04t0590400-01 | Rice | cytosol, nucleus, peroxisome | 38.86 | 36.48 |
| KXG37250 | Sorghum | cytosol | 39.53 | 36.25 |
| KRH29771 | Soybean | cytosol | 41.21 | 36.18 |
| KRH24773 | Soybean | nucleus | 41.37 | 35.95 |
| CDY47877 | Canola | nucleus | 37.19 | 35.92 |
| KRH23094 | Soybean | cytosol | 33.17 | 35.8 |
| CDY39530 | Canola | cytosol | 37.02 | 35.7 |
| KXG38103 | Sorghum | cytosol | 37.35 | 35.62 |
| Zm00001d011070_P001 | Maize | cytosol | 37.02 | 35.25 |
| KXG21080 | Sorghum | cytosol | 36.85 | 35.14 |
| GSMUA_Achr10P... | Banana | nucleus | 25.96 | 35.07 |
| HORVU5Hr1G113620.1 | Barley | cytosol, nucleus, peroxisome | 37.69 | 34.94 |
| KXG21079 | Sorghum | cytosol | 36.35 | 34.83 |
| Zm00001d035671_P001 | Maize | cytosol | 36.52 | 34.82 |
| GSMUA_Achr10P... | Banana | cytosol | 34.84 | 34.72 |
| CDX79750 | Canola | peroxisome | 38.86 | 34.42 |
| CDX86475 | Canola | nucleus | 40.87 | 34.37 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 38.69 | 34.32 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 37.52 | 34.09 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 37.52 | 34.09 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 37.35 | 34.05 |
| CDY06266 | Canola | cytosol | 35.51 | 33.54 |
| HORVU3Hr1G012550.6 | Barley | cytosol | 33.17 | 33.22 |
| CDY47878 | Canola | nucleus | 38.36 | 33.14 |
| CDX77228 | Canola | cytosol | 36.68 | 32.59 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 33.17 | 32.35 |
| OQU92829 | Sorghum | cytosol | 39.7 | 32.29 |
| CDY06265 | Canola | cytosol | 37.19 | 32.17 |
| CDY15616 | Canola | nucleus | 38.53 | 32.17 |
| GSMUA_Achr7P15080_001 | Banana | cytosol | 31.83 | 31.77 |
| Os03t0690600-03 | Rice | cytosol | 38.86 | 31.74 |
| Zm00001d028603_P001 | Maize | cytosol | 38.69 | 31.47 |
| CDY09912 | Canola | cytosol | 36.85 | 31.43 |
| CDY31749 | Canola | cytosol | 38.19 | 31.41 |
| CDY07309 | Canola | cytosol | 12.56 | 31.25 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 34.84 | 30.14 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 19.77 | 30.1 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 35.18 | 29.83 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 35.51 | 29.73 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 35.01 | 28.95 |
| EES18882 | Sorghum | cytosol | 35.51 | 28.92 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 32.66 | 28.85 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 34.51 | 28.81 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 34.67 | 28.71 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 35.01 | 28.71 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 33.67 | 28.67 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 34.34 | 28.63 |
| OQU91407 | Sorghum | nucleus | 32.83 | 28.57 |
| Zm00001d035670_P001 | Maize | cytosol | 34.67 | 28.51 |
| HORVU1Hr1G004440.1 | Barley | cytosol | 34.34 | 28.51 |
| CDY00883 | Canola | cytosol | 19.26 | 28.4 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 34.34 | 28.39 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 33.5 | 28.33 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 36.68 | 28.29 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 34.51 | 28.26 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 36.68 | 28.22 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 36.68 | 28.22 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 34.17 | 28.14 |
| Zm00001d047813_P002 | Maize | nucleus | 39.03 | 28.11 |
| HORVU5Hr1G045020.29 | Barley | cytosol | 36.85 | 27.95 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 33.84 | 27.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.65 | 27.77 |
| TraesCS1A01G030200.1 | Wheat | cytosol | 33.5 | 27.74 |
| EES18880 | Sorghum | cytosol | 33.84 | 27.26 |
| CDY09911 | Canola | nucleus | 26.63 | 27.23 |
| KXG38064 | Sorghum | nucleus | 32.16 | 26.67 |
| Zm00001d033166_P001 | Maize | nucleus | 32.5 | 26.5 |
| EER91260 | Sorghum | nucleus | 31.49 | 26.07 |
| OQU91406 | Sorghum | nucleus | 32.5 | 25.94 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 21.27 | 25.55 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 21.27 | 25.55 |
| CDY71156 | Canola | cytosol, plastid | 16.58 | 25.38 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.16 | 25.36 |
| CDY00074 | Canola | cytosol, plastid | 21.11 | 25.35 |
| CDY19966 | Canola | cytosol | 20.94 | 25.3 |
| CDY05700 | Canola | cytosol, plastid | 20.94 | 25.15 |
| CDY71174 | Canola | cytosol, plastid | 20.94 | 25.15 |
| CDY58168 | Canola | plastid | 21.78 | 24.53 |
| CDY22807 | Canola | nucleus | 17.25 | 24.52 |
| CDY37124 | Canola | nucleus | 17.25 | 24.52 |
| CDY42968 | Canola | cytosol | 21.61 | 24.11 |
| CDY35589 | Canola | cytosol | 21.44 | 24.11 |
| CDY50128 | Canola | cytosol, plastid | 21.11 | 23.64 |
| CDY00533 | Canola | cytosol | 16.75 | 22.42 |
| CDY27821 | Canola | cytosol | 16.58 | 22.3 |
| CDY61060 | Canola | cytosol | 19.93 | 22.08 |
| CDY00377 | Canola | cytosol | 19.77 | 21.45 |
| CDY68224 | Canola | cytosol | 19.6 | 20.31 |
| CDY50240 | Canola | cytosol | 19.43 | 20.14 |
| CDY27063 | Canola | cytosol, plastid | 18.76 | 19.44 |
| CDX91655 | Canola | cytosol | 17.25 | 17.52 |
Protein Annotations
| EnsemblPlants:CDY33040 | EnsemblPlantsGene:GSBRNA2T00053275001 | GO:A0A078H373 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF56 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:CDY33040 | ProteinID:CDY33040.1 |
| SEG:seg | UniParc:UPI0004EEFEAD | UniProt:A0A078H373 | MapMan:15.5.12 | : | : |
Description
BnaA10g12460DBnaA10g12460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H373]
Coordinates
chrLK032304:+:403220..405116
Molecular Weight (calculated)
67373.7 Da
IEP (calculated)
6.389
GRAVY (calculated)
-0.439
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALLQVSVD GFRFDGSGSG SCCKPRNNLE TQNQSSPPSI CQDNAPVLKY INDMLMDEED FVEDNLALQA AERSFHELLH QPPSSESSDQ NSTSSGEHDC
101: SFPSTTTTDS AGSLVSNGES QRKYRHRDNE EDDLENGRRN KQPAIFISEM EELAAKFEHV LLVCKSNQED DSSSSTTTAT TKKQNPPPPP NKATGRAKGS
201: KAIKSNAVDL RSLLTQCAQA VASFDHRRAT EKLKEIRSNS SPSGDGIQRL AFYFAEALEA RITGIISPPL CTAFPSSTTS MVDILKAYKL FVHVCPIYVA
301: DYFAANKSIY ELALSSTKLH IIDFGVLYGF QWPCLLLALS KRPGGPPKLR VTGIELPQSG FRPSDRVEET GRRLKRFCDM FNVPFEFNFI AKKWESITLD
401: EITITPGETT VVNCIHRLQY TPDETVSLDS PRDTVLKLFR DINPDLFVFA EINGTYNSPF FMTRFKEALF HFSSLFDMFD TTIQAEDEYK NRALLERELL
501: VRDAMSVISS EGAERFARPE TYKQWRVRIL RAGFRPAMIS KEILKGAKEI VRKRYHKDFL IDGDANWMLQ GWKGRVIYAF SCWKPAEKLT RDDHIII
101: SFPSTTTTDS AGSLVSNGES QRKYRHRDNE EDDLENGRRN KQPAIFISEM EELAAKFEHV LLVCKSNQED DSSSSTTTAT TKKQNPPPPP NKATGRAKGS
201: KAIKSNAVDL RSLLTQCAQA VASFDHRRAT EKLKEIRSNS SPSGDGIQRL AFYFAEALEA RITGIISPPL CTAFPSSTTS MVDILKAYKL FVHVCPIYVA
301: DYFAANKSIY ELALSSTKLH IIDFGVLYGF QWPCLLLALS KRPGGPPKLR VTGIELPQSG FRPSDRVEET GRRLKRFCDM FNVPFEFNFI AKKWESITLD
401: EITITPGETT VVNCIHRLQY TPDETVSLDS PRDTVLKLFR DINPDLFVFA EINGTYNSPF FMTRFKEALF HFSSLFDMFD TTIQAEDEYK NRALLERELL
501: VRDAMSVISS EGAERFARPE TYKQWRVRIL RAGFRPAMIS KEILKGAKEI VRKRYHKDFL IDGDANWMLQ GWKGRVIYAF SCWKPAEKLT RDDHIII
001: MDALLQVSVD GFRFENGSGS CCKPRNNLES GNNLFPDFHE SQNQSSPNDS PPTVCLDNSP VLKYINDMLM DEEDFVGISR DDLALQAAER SFYEIIQQQS
101: PESDQNTSSS SDQNSGDQDF CFPSTTTDSS ALVSSGESQR KYRHRNDEED DLENNRRNKQ PAIFVSEMEE LAVKLEHVLL VCKTNQEEEE ERTVITKQST
201: PNRAGRAKGS SNKSKTHKTN TVDLRSLLTQ CAQAVASFDQ RRATDKLKEI RAHSSSNGDG TQRLAFYFAE ALEARITGNI SPPVSNPFPS STTSMVDILK
301: AYKLFVHTCP IYVTDYFAAN KSIYELAMKA TKLHIVDFGV LYGFQWPCLL RALSKRPGGP PMLRVTGIEL PQAGFRPSDR VEETGRRLKR FCDQFNVPFE
401: FNFIAKKWET ITLDELMINP GETTVVNCIH RLQYTPDETV SLDSPRDTVL KLFRDINPDL FVFAEINGMY NSPFFMTRFR EALFHYSSLF DMFDTTIHAE
501: DEYKNRSLLE RELLVRDAMS VISCEGAERF ARPETYKQWR VRILRAGFKP ATISKQIMKE AKEIVRKRYH RDFVIDSDNN WMLQGWKGRV IYAFSCWKPA
601: EKFTNNNLNI
101: PESDQNTSSS SDQNSGDQDF CFPSTTTDSS ALVSSGESQR KYRHRNDEED DLENNRRNKQ PAIFVSEMEE LAVKLEHVLL VCKTNQEEEE ERTVITKQST
201: PNRAGRAKGS SNKSKTHKTN TVDLRSLLTQ CAQAVASFDQ RRATDKLKEI RAHSSSNGDG TQRLAFYFAE ALEARITGNI SPPVSNPFPS STTSMVDILK
301: AYKLFVHTCP IYVTDYFAAN KSIYELAMKA TKLHIVDFGV LYGFQWPCLL RALSKRPGGP PMLRVTGIEL PQAGFRPSDR VEETGRRLKR FCDQFNVPFE
401: FNFIAKKWET ITLDELMINP GETTVVNCIH RLQYTPDETV SLDSPRDTVL KLFRDINPDL FVFAEINGMY NSPFFMTRFR EALFHYSSLF DMFDTTIHAE
501: DEYKNRSLLE RELLVRDAMS VISCEGAERF ARPETYKQWR VRILRAGFKP ATISKQIMKE AKEIVRKRYH RDFVIDSDNN WMLQGWKGRV IYAFSCWKPA
601: EKFTNNNLNI
Arabidopsis Description
SCL11Scarecrow-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTI5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.