Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G031200.1 | Wheat | cytosol | 78.64 | 77.78 |
| TraesCS1A01G030300.1 | Wheat | cytosol | 75.73 | 77.34 |
| Zm00001d035670_P001 | Maize | cytosol | 52.84 | 52.48 |
| EES18880 | Sorghum | cytosol | 53.81 | 52.36 |
| EES18882 | Sorghum | cytosol | 52.01 | 51.16 |
| Solyc04g011630.1.1 | Tomato | cytosol | 11.23 | 47.65 |
| CDX68389 | Canola | cytosol | 5.41 | 45.88 |
| VIT_06s0004g04990.t01 | Wine grape | cytosol | 27.74 | 45.25 |
| GSMUA_Achr8P02550_001 | Banana | nucleus | 23.02 | 42.35 |
| TraesCS5A01G505900.1 | Wheat | cytosol | 23.58 | 41.98 |
| Bra002564.1-P | Field mustard | endoplasmic reticulum, golgi | 17.61 | 40.06 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 17.48 | 39.75 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 27.32 | 39.56 |
| GSMUA_Achr6P34090_001 | Banana | nucleus | 33.01 | 38.89 |
| PGSC0003DMT400005480 | Potato | cytosol | 25.8 | 38.19 |
| TraesCS3A01G068000.1 | Wheat | nucleus | 37.31 | 37.57 |
| VIT_06s0004g04970.t01 | Wine grape | cytosol | 34.26 | 37.54 |
| PGSC0003DMT400049420 | Potato | cytosol | 34.4 | 37.35 |
| VIT_13s0019g01780.t01 | Wine grape | nucleus | 30.93 | 37.17 |
| KRH10240 | Soybean | cytosol | 31.21 | 37.13 |
| KRH24780 | Soybean | cytosol | 33.84 | 36.97 |
| KRH65839 | Soybean | cytosol, plastid | 37.17 | 36.71 |
| VIT_08s0007g00510.t01 | Wine grape | cytosol, plastid | 35.78 | 36.39 |
| KRH49113 | Soybean | cytosol | 37.03 | 36.38 |
| KRG99969 | Soybean | cytosol | 37.03 | 36.23 |
| KRH23095 | Soybean | cytosol | 33.01 | 36.23 |
| TraesCS5A01G481300.1 | Wheat | cytosol | 32.73 | 36.03 |
| TraesCS3A01G067900.1 | Wheat | cytosol | 36.06 | 36.01 |
| KRH29771 | Soybean | cytosol | 33.84 | 35.88 |
| PGSC0003DMT400016258 | Potato | cytosol | 36.06 | 35.71 |
| Bra033813.1-P | Field mustard | nucleus | 28.71 | 35.57 |
| AT2G29065.1 | Thale cress | cytosol, nucleus, plastid | 31.07 | 35.56 |
| CDY47877 | Canola | nucleus | 30.1 | 35.11 |
| CDY71578 | Canola | nucleus, plastid | 25.24 | 34.93 |
| TraesCS5A01G139000.1 | Wheat | cytosol, plastid | 37.59 | 34.92 |
| Solyc05g053090.1.1 | Tomato | cytosol | 35.92 | 34.86 |
| Bra028391.1-P | Field mustard | nucleus | 29.96 | 34.84 |
| PGSC0003DMT400069949 | Potato | cytosol | 36.06 | 34.81 |
| VIT_06s0004g04980.t01 | Wine grape | nucleus | 33.98 | 34.8 |
| KRH24773 | Soybean | nucleus | 33.15 | 34.79 |
| VIT_13s0019g01810.t01 | Wine grape | cytosol | 36.06 | 34.76 |
| CDY39530 | Canola | cytosol | 29.82 | 34.73 |
| CDX82987 | Canola | nucleus | 28.85 | 34.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.62 | 34.6 |
| KRH23094 | Soybean | cytosol | 26.49 | 34.54 |
| VIT_13s0019g01710.t01 | Wine grape | cytosol | 34.81 | 34.53 |
| PGSC0003DMT400063769 | Potato | cytosol, nucleus, peroxisome | 30.93 | 34.52 |
| Solyc09g010920.1.1 | Tomato | cytosol | 36.34 | 34.43 |
| KRH29774 | Soybean | cytosol | 30.1 | 34.39 |
| AT3G46600.1 | Thale cress | cytosol | 27.74 | 34.31 |
| PGSC0003DMT400022997 | Potato | cytosol, plastid | 36.2 | 34.3 |
| TraesCS4A01G176600.1 | Wheat | cytosol | 30.79 | 34.21 |
| CDX79750 | Canola | peroxisome | 31.9 | 34.12 |
| KRH29773 | Soybean | cytosol | 28.99 | 34.04 |
| Bra000012.1-P | Field mustard | cytosol, nucleus, peroxisome | 31.76 | 34.03 |
| KRH23089 | Soybean | cytosol | 30.37 | 34.01 |
| KRH10243 | Soybean | nucleus | 31.35 | 33.98 |
| VIT_06s0004g04950.t01 | Wine grape | cytosol | 35.51 | 33.95 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 31.62 | 33.88 |
| Solyc01g100200.2.1 | Tomato | nucleus | 31.21 | 33.78 |
| KRH29775 | Soybean | nucleus | 31.48 | 33.73 |
| KRH29779 | Soybean | cytosol | 34.54 | 33.56 |
| Solyc10g086530.1.1 | Tomato | cytosol | 35.37 | 33.51 |
| CDY33040 | Canola | nucleus | 27.74 | 33.5 |
| VIT_13s0019g01790.t01 | Wine grape | cytosol | 33.29 | 33.38 |
| VIT_13s0019g01700.t01 | Wine grape | cytosol | 35.09 | 33.29 |
| Solyc06g082530.1.1 | Tomato | cytosol | 29.96 | 33.08 |
| PGSC0003DMT400077972 | Potato | cytosol | 34.26 | 32.85 |
| KRH24775 | Soybean | cytosol | 30.93 | 32.79 |
| AT5G59450.1 | Thale cress | nucleus | 27.74 | 32.79 |
| Solyc06g076280.1.1 | Tomato | cytosol | 33.84 | 32.62 |
| Bra015584.1-P | Field mustard | cytosol | 19.69 | 32.57 |
| TraesCS3A01G360300.1 | Wheat | cytosol, extracellular, nucleus | 35.64 | 32.53 |
| TraesCS5A01G506000.1 | Wheat | cytosol | 27.18 | 32.45 |
| TraesCS5A01G506100.1 | Wheat | cytosol | 28.85 | 32.35 |
| CDY47878 | Canola | nucleus | 30.93 | 32.27 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 33.29 | 32.26 |
| PGSC0003DMT400078286 | Potato | nucleus | 29.82 | 32.23 |
| KRH23090 | Soybean | vacuole | 27.74 | 32.21 |
| CDX68388 | Canola | cytosol | 18.45 | 32.13 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 29.96 | 32.0 |
| KRH10241 | Soybean | cytosol, nucleus, peroxisome | 30.37 | 31.83 |
| KRH24778 | Soybean | nucleus | 29.82 | 31.8 |
| KRH23091 | Soybean | endoplasmic reticulum, plasma membrane | 32.73 | 31.76 |
| Bra028390.1-P | Field mustard | cytosol | 31.07 | 31.73 |
| CDX86475 | Canola | nucleus | 31.21 | 31.69 |
| CDY06266 | Canola | cytosol | 27.74 | 31.65 |
| Bra030688.1-P | Field mustard | nucleus | 32.45 | 31.49 |
| AT2G37650.1 | Thale cress | cytosol | 31.35 | 31.48 |
| CDY15616 | Canola | nucleus | 30.93 | 31.19 |
| TraesCS4A01G176500.1 | Wheat | cytosol | 21.5 | 31.12 |
| TraesCS4A01G176700.1 | Wheat | cytosol | 28.71 | 31.03 |
| AT2G29060.1 | Thale cress | cytosol | 29.82 | 30.98 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 31.9 | 30.75 |
| VIT_06s0004g04960.t01 | Wine grape | nucleus | 33.98 | 30.74 |
| CDX77228 | Canola | cytosol | 28.57 | 30.65 |
| TraesCS4A01G177100.1 | Wheat | nucleus | 27.32 | 30.64 |
| Bra035653.1-P | Field mustard | cytosol | 30.51 | 30.47 |
| AT1G07520.3 | Thale cress | cytosol | 29.4 | 30.46 |
| CDY31749 | Canola | cytosol | 30.65 | 30.44 |
| Bra031581.1-P | Field mustard | cytosol | 28.02 | 30.24 |
| AT1G07530.1 | Thale cress | cytosol | 32.04 | 30.04 |
| Bra031580.1-P | Field mustard | cytosol | 28.43 | 29.71 |
| CDY06265 | Canola | cytosol | 28.43 | 29.71 |
| CDY09912 | Canola | cytosol | 28.43 | 29.29 |
| TraesCS4A01G176200.1 | Wheat | peroxisome | 31.9 | 28.68 |
| CDY09911 | Canola | nucleus | 22.19 | 27.4 |
| TraesCS5A01G414000.1 | Wheat | cytosol | 16.09 | 27.23 |
| TraesCS5A01G409800.1 | Wheat | nucleus, plastid | 16.64 | 23.95 |
| TraesCS2A01G189600.1 | Wheat | cytosol | 17.89 | 23.29 |
| TraesCS4A01G039000.1 | Wheat | nucleus | 15.53 | 22.9 |
| TraesCS3A01G408000.1 | Wheat | cytosol | 17.06 | 22.28 |
| TraesCS2A01G214400.1 | Wheat | cytosol | 17.48 | 22.11 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 14.98 | 17.12 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G030200.1 | EnsemblPlantsGene:TraesCS1A01G030200 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF14 |
| PFAM:PF03514 | PFscan:PS50985 | MapMan:15.5.12 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:14063144..14065309
Molecular Weight (calculated)
81724.9 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.504
Length
721 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIEPLRDNL DTVTPTDQPN DGDSSSQQQL TMYNYDLSGP PSTVLSPANQ ASTDLLGGVT GPGLCSVNSS LGQNQFQIGA GCSPEHRQIR SNDALHYISQ
101: MLMEDVDERV DICQGEAAIQ ATEQPFRDIL GQVYTPALYS NNKQDSPDKS GTSCYKRLWS TSFSNDCSSY SLVQPLTTPL SPDICNRSLS QPNQPLISVG
201: WTSGSGFPNL HRQRSVDEEN IFAPSIDNVV ICFKNDILHI SQLTTKAKVG ERGENTIFEV ADQRGWGIFQ GRSNKHHAIT TCAIIRNENF DRVLLCYGRS
301: DQIRRLRERM AETGSNNTLK GWSKGRQKLW ARKQQRQEFV DIRALLFQCA QAVAEDNHLF ANELLKKIRE HSSADGDCTQ RLAFYLADGL AARLAGTGGQ
401: VYRNLMERRT SRTDWLVAYS LFHASCPFDR TSHYFASQAI LGVSQGQPRV HIVDFGIGFG LQWPLMIQRF SQQEEGAPKL RITGIDIPQP GLHPCEMIEE
501: TGKRLADYAN MFKVPFQYQG IAASRWETIK IEDLNIDEDE VLIINCIFRM KNLGHETAGI NSARDEVMKT MRRMNPKIFI SGTMNGLHSS PFFIQRFKEV
601: MLHYSPMFDM LDANVPRDNK ARKMIERIRF GTDALNIIAC EGADRTERPE SYRQWQARFL KAGFQQLPVD PAFLKRVHMN NSHYHKEFFA VEDRGWLLQG
701: WKGRVLYAIS KWKPNETYDD Q
101: MLMEDVDERV DICQGEAAIQ ATEQPFRDIL GQVYTPALYS NNKQDSPDKS GTSCYKRLWS TSFSNDCSSY SLVQPLTTPL SPDICNRSLS QPNQPLISVG
201: WTSGSGFPNL HRQRSVDEEN IFAPSIDNVV ICFKNDILHI SQLTTKAKVG ERGENTIFEV ADQRGWGIFQ GRSNKHHAIT TCAIIRNENF DRVLLCYGRS
301: DQIRRLRERM AETGSNNTLK GWSKGRQKLW ARKQQRQEFV DIRALLFQCA QAVAEDNHLF ANELLKKIRE HSSADGDCTQ RLAFYLADGL AARLAGTGGQ
401: VYRNLMERRT SRTDWLVAYS LFHASCPFDR TSHYFASQAI LGVSQGQPRV HIVDFGIGFG LQWPLMIQRF SQQEEGAPKL RITGIDIPQP GLHPCEMIEE
501: TGKRLADYAN MFKVPFQYQG IAASRWETIK IEDLNIDEDE VLIINCIFRM KNLGHETAGI NSARDEVMKT MRRMNPKIFI SGTMNGLHSS PFFIQRFKEV
601: MLHYSPMFDM LDANVPRDNK ARKMIERIRF GTDALNIIAC EGADRTERPE SYRQWQARFL KAGFQQLPVD PAFLKRVHMN NSHYHKEFFA VEDRGWLLQG
701: WKGRVLYAIS KWKPNETYDD Q
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.