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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • cytosol 2
  • nucleus 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g010920.1.1 Tomato cytosol 96.85 96.85
PGSC0003DMT400049420 Potato cytosol 66.62 76.36
VIT_08s0007g00510.t01 Wine grape cytosol, plastid 58.21 62.48
KRH65839 Soybean cytosol, plastid 55.45 57.81
GSMUA_Achr10P... Banana nucleus 33.11 57.01
KRG99969 Soybean cytosol 55.19 56.99
KRH49113 Soybean cytosol 54.4 56.4
PGSC0003DMT400016258 Potato cytosol 51.25 53.57
GSMUA_Achr10P... Banana cytosol 41.92 53.26
GSMUA_Achr8P02550_001 Banana nucleus 26.94 52.3
Bra000012.1-P Field mustard cytosol, nucleus, peroxisome 45.86 51.86
CDX79750 Canola peroxisome 45.86 51.78
CDY07777 Canola cytosol, nucleus, peroxisome 45.6 51.56
PGSC0003DMT400005480 Potato cytosol 32.72 51.13
AT2G37650.1 Thale cress cytosol 47.83 50.7
GSMUA_Achr6P34090_001 Banana nucleus 40.21 50.0
GSMUA_Achr7P15080_001 Banana cytosol 39.16 49.83
PGSC0003DMT400069949 Potato cytosol 48.88 49.8
Zm00001d034664_P001 Maize plastid 36.01 49.02
OQU92829 Sorghum cytosol 47.17 48.91
Zm00001d028603_P001 Maize cytosol 46.65 48.37
TraesCS1B01G037500.1 Wheat cytosol 26.15 48.18
Os03t0690600-03 Rice cytosol 46.25 48.15
Os04t0590400-01 Rice cytosol, nucleus, peroxisome 39.55 47.33
HORVU3Hr1G012520.1 Barley cytosol 27.73 46.27
TraesCS5A01G481300.1 Wheat cytosol 39.68 46.11
KXG37250 Sorghum cytosol 39.42 46.08
PGSC0003DMT400077972 Potato cytosol 45.47 46.01
TraesCS5D01G494900.1 Wheat cytosol 39.42 45.66
TraesCS5B01G494500.1 Wheat cytosol 39.29 45.51
HORVU5Hr1G113620.1 Barley cytosol, nucleus, peroxisome 38.5 45.5
KXG38103 Sorghum cytosol 36.79 44.73
TraesCS5A01G139000.1 Wheat cytosol, plastid 45.2 44.33
TraesCS5D01G152700.1 Wheat cytosol, plastid 44.94 44.19
GSMUA_AchrUn_... Banana cytosol 38.24 44.16
KXG21080 Sorghum cytosol 36.27 44.09
TraesCS5B01G138100.1 Wheat cytosol, plastid 44.94 44.07
Zm00001d011070_P001 Maize cytosol 36.27 44.02
KXG21079 Sorghum cytosol 35.61 43.5
PGSC0003DMT400063769 Potato cytosol, nucleus, peroxisome 36.93 43.5
HORVU5Hr1G045020.29 Barley cytosol 44.68 43.2
Zm00001d035671_P001 Maize cytosol 35.22 42.81
Zm00001d047813_P002 Maize nucleus 46.25 42.46
PGSC0003DMT400078286 Potato nucleus 36.79 41.98
HORVU3Hr1G012550.6 Barley cytosol 31.93 40.77
TraesCS1B01G037300.1 Wheat cytosol 35.74 38.64
TraesCS1D01G030900.1 Wheat cytosol 35.35 37.73
TraesCS1D01G030800.1 Wheat cytosol 34.69 37.66
OQU91407 Sorghum nucleus 33.9 37.61
TraesCS1A01G030300.1 Wheat cytosol 34.69 37.39
HORVU1Hr1G004440.1 Barley cytosol 35.22 37.27
TraesCS3D01G067900.1 Wheat nucleus 33.77 37.25
Zm00001d035670_P001 Maize cytosol 35.48 37.19
EES18882 Sorghum cytosol 35.61 36.97
TraesCS1D01G031000.1 Wheat cytosol 35.22 36.97
TraesCS1B01G037400.1 Wheat cytosol 35.09 36.93
TraesCS1D01G031200.1 Wheat cytosol 35.09 36.63
KXG38064 Sorghum nucleus 34.3 36.25
TraesCS1A01G030200.1 Wheat cytosol 34.3 36.2
EER91260 Sorghum nucleus 34.17 36.06
TraesCS3A01G068000.1 Wheat nucleus 33.9 36.03
TraesCS3B01G081000.1 Wheat cytosol 34.43 35.99
TraesCS3B01G081100.1 Wheat nucleus 33.77 35.94
Zm00001d033166_P001 Maize nucleus 34.56 35.93
OQU91406 Sorghum nucleus 35.09 35.7
TraesCS3B01G080900.1 Wheat nucleus 33.77 35.64
TraesCS3A01G067900.1 Wheat cytosol 33.77 35.6
TraesCS3D01G067700.1 Wheat cytosol 33.77 35.6
TraesCS3D01G067800.1 Wheat nucleus 31.54 35.5
EES18880 Sorghum cytosol 34.43 35.36
TraesCS1B01G037200.1 Wheat nucleus 33.25 33.42
PGSC0003DMT400015696 Potato cytosol 19.32 27.48
PGSC0003DMT400057111 Potato nucleus 19.05 27.0
PGSC0003DMT400060553 Potato cytosol 18.53 26.91
PGSC0003DMT400034763 Potato cytosol 18.4 26.22
PGSC0003DMT400021748 Potato nucleus 18.4 25.04
PGSC0003DMT400056120 Potato cytosol 18.0 24.51
PGSC0003DMT400049492 Potato cytosol 18.27 23.88
PGSC0003DMT400063944 Potato cytosol, mitochondrion 15.77 21.47
PGSC0003DMT400076932 Potato nucleus 14.19 17.82
PGSC0003DMT400026240 Potato nucleus, plastid 14.59 16.97
Protein Annotations
EnsemblPlants:PGSC0003DMT400022997EnsemblPlantsGene:PGSC0003DMG400008904EntrezGene:102600423GO:GO:0006139GO:GO:0006351GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR005202InterPro:TF_GRAS
PANTHER:PTHR31636PANTHER:PTHR31636:SF44PFAM:PF03514PFscan:PS50985PGSC:PGSC0003DMG400008904RefSeq:XP_006341017.1
SEG:segUniParc:UPI0002947F0BUniProt:M1AHK3MapMan:15.5.12::
Description
GRAS family transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400008904]
Coordinates
chr9:-:1651967..1655779
Molecular Weight (calculated)
85915.1 Da
IEP (calculated)
5.850
GRAVY (calculated)
-0.508
Length
761 amino acids
Sequence
(BLAST)
001: MDPRFNGHPS SLNNFRFGNQ PLPFSSEQRM INGPRFGLIY SDQNLLNGPR LENNFVQHDF GAVGFISGDH LPTNVESRTD LGVENDFNED IDFSDAVLSY
101: INRMLMEEDM EDKTDMLQES LELQAKEKSL YEALGKKYPL SPEQNVFTDR NSESPDDYFA GSIYNSTSNT GGSSGYLIDP RGVNISTDCN SSYFEGLSFH
201: NTSSVCSSNS GSNVVDGFLD SPVSSFHIPD IYDESQSILN FQKGVEEASK FLPTSNKLLN SVDINDLPSR EPQRQAGYAA AQVEEKDEGE TSPTEVRGKK
301: NPLRGDNNIE GERSSKQAAV FTESTLRSEE FDIVLLNSMG KGGEALEAYR QNLRNAKSKT TVQISKGSKG GKGRGKKQGG KKEVIDLRTL MINCAQAVAA
401: DDSRIAYELL KQIRQHSSPF GDGNQRLAHC FADGLEARLA GTGSQIYKAL VNKRTSAADL LKAYHLYLAS SPFRKISSFA SNKTIMIKAE NATRVHVIDF
501: GILYGFQWPT FIQRIAEREG GPPRLRITGI EFPQPGFRPA ERIEETGRRL ADYARSFNVP FEYHAIAKKW ESITVEDLKL DKDEFLAVNC LYRFKNLHDE
601: TIAVESSRTI VLNLVRKINP DIFVHGIVNG AYSAPFFVTR FREALFHFSA LFDMLETIVP REIPERRLIE REIFGREALN VIACEGWERV ERPETYKQWQ
701: ARIMGARFTQ IPFDREEFVN KAIEKVRLGY HRDFVIDEDS QWLLLGWKGR TIYALSCWKP V
Best Arabidopsis Sequence Match ( AT2G37650.1 )
(BLAST)
001: MITEPSLTGI SGMVNRNRLS GLPDQPSSHS FTPVTLYDGF NYNLSSDHIN TVVAAPENSV FIREEEEEED PADDFDFSDA VLGYISQMLN EEDMDDKVCM
101: LQESLDLEAA ERSLYEAIGK KYPPSPERNL AFAERNSENL DRVVPGNYTG GDCIGFGNGG IKPLSSGFTL DFRNPQSCSS ILSVPQSNGL ITIYGDGIDE
201: SSKNNRENHQ SVWLFRREIE EANRFNPEEN ELIVNFREEN CVSKARKNSS RDEICVEEER SSKLPAVFGE DILRSDVVDK ILVHVPGGES MKEFNALRDV
301: LKKGVEKKKA SDAQGGKRRA RGRGRGRGRG GGGGQNGKKE VVDLRSLLIH CAQAVAADDR RCAGQLLKQI RLHSTPFGDG NQRLAHCFAN GLEARLAGTG
401: SQIYKGIVSK PRSAAAVLKA HQLFLACCPF RKLSYFITNK TIRDLVGNSQ RVHVIDFGIL YGFQWPTLIH RFSMYGSPKV RITGIEFPQP GFRPAQRVEE
501: TGQRLAAYAK LFGVPFEYKA IAKKWDAIQL EDLDIDRDEI TVVNCLYRAE NLHDESVKVE SCRDTVLNLI GKINPDLFVF GIVNGAYNAP FFVTRFREAL
601: FHFSSIFDML ETIVPREDEE RMFLEMEVFG REALNVIACE GWERVERPET YKQWHVRAMR SGLVQVPFDP SIMKTSLHKV HTFYHKDFVI DQDNRWLLQG
701: WKGRTVMALS VWKPESKA
Arabidopsis Description
SCL9Scarecrow-like protein 9 [Source:UniProtKB/Swiss-Prot;Acc:O80933]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.