Factsheet for TraesCS1D01G031000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G004440.1	Barley	cytosol	82.62	83.31
TraesCS1D01G030800.1	Wheat	cytosol	73.1	75.61
TraesCS1D01G030900.1	Wheat	cytosol	73.79	75.04
TraesCS1D01G031200.1	Wheat	cytosol	74.9	74.49
Zm00001d035670_P001	Maize	cytosol	53.79	53.72
EES18880	Sorghum	cytosol	54.07	52.9
EES18882	Sorghum	cytosol	53.1	52.52
Solyc04g011630.1.1	Tomato	cytosol	12.14	51.76
VIT_06s0004g04990.t01	Wine grape	cytosol	28.14	46.15
GSMUA_Achr8P02550_001	Banana	nucleus	23.72	43.88
CDX68389	Canola	cytosol	4.97	42.35
Bra002564.1-P	Field mustard	endoplasmic reticulum, golgi	17.93	41.01
TraesCS3D01G067900.1	Wheat	nucleus	38.76	40.72
CDX80265	Canola	endoplasmic reticulum, golgi	17.79	40.69
TraesCS3D01G067700.1	Wheat	cytosol	39.31	39.47
GSMUA_Achr6P34090_001	Banana	nucleus	33.1	39.22
PGSC0003DMT400049420	Potato	cytosol	35.59	38.86
PGSC0003DMT400005480	Potato	cytosol	26.07	38.81
TraesCS3D01G067800.1	Wheat	nucleus	35.86	38.46
VIT_06s0004g04970.t01	Wine grape	cytosol	34.9	38.45
TraesCS5D01G494900.1	Wheat	cytosol	34.48	38.05
KRH24780	Soybean	cytosol	34.48	37.88
KRH10240	Soybean	cytosol	31.59	37.79
KRH49113	Soybean	cytosol	37.66	37.19
VIT_13s0019g01780.t01	Wine grape	nucleus	30.76	37.17
KRH29773	Soybean	cytosol	31.45	37.13
KRH65839	Soybean	cytosol, plastid	37.24	36.99
VIT_08s0007g00510.t01	Wine grape	cytosol, plastid	36.14	36.95
KRG99969	Soybean	cytosol	37.38	36.77
CDY71578	Canola	nucleus, plastid	26.34	36.66
KRH29771	Soybean	cytosol	34.34	36.62
KRH29774	Soybean	cytosol	31.86	36.61
PGSC0003DMT400016258	Potato	cytosol	36.41	36.26
KRH23095	Soybean	cytosol	32.83	36.23
Bra000012.1-P	Field mustard	cytosol, nucleus, peroxisome	33.52	36.11
CDY07777	Canola	cytosol, nucleus, peroxisome	33.52	36.11
CDX79750	Canola	peroxisome	33.52	36.05
TraesCS5D01G152700.1	Wheat	cytosol, plastid	38.48	36.05
AT2G29065.1	Thale cress	cytosol, nucleus, plastid	31.31	36.03
Solyc05g053090.1.1	Tomato	cytosol	36.83	35.94
VIT_06s0004g04980.t01	Wine grape	nucleus	34.76	35.8
KRH24775	Soybean	cytosol	33.52	35.74
PGSC0003DMT400069949	Potato	cytosol	36.69	35.61
CDY47877	Canola	nucleus	30.34	35.6
TraesCS4D01G136000.1	Wheat	cytosol	31.86	35.59
KRH24773	Soybean	nucleus	33.66	35.52
Bra033813.1-P	Field mustard	nucleus	28.41	35.4
GSMUA_AchrUn_...	Banana	cytosol	32.14	35.36
Bra028391.1-P	Field mustard	nucleus	30.21	35.32
VIT_13s0019g01810.t01	Wine grape	cytosol	36.41	35.29
CDY39530	Canola	cytosol	30.07	35.22
PGSC0003DMT400022997	Potato	cytosol, plastid	36.97	35.22
PGSC0003DMT400063769	Potato	cytosol, nucleus, peroxisome	31.31	35.14
KRH23094	Soybean	cytosol	26.76	35.08
Solyc09g010920.1.1	Tomato	cytosol	36.69	34.95
Solyc10g086530.1.1	Tomato	cytosol	36.69	34.95
VIT_13s0019g01710.t01	Wine grape	cytosol	35.03	34.94
KRH29775	Soybean	nucleus	32.28	34.77
KRH24778	Soybean	nucleus	32.28	34.62
CDX82987	Canola	nucleus	28.69	34.61
TraesCS4D01G136100.1	Wheat	cytosol	27.86	34.59
KRH10243	Soybean	nucleus	31.45	34.29
TraesCS5D01G092000.1	Wheat	cytosol	29.1	34.25
Solyc01g100200.2.1	Tomato	nucleus	31.45	34.23
CDY33040	Canola	nucleus	28.14	34.17
CDY47878	Canola	nucleus	32.55	34.15
KRH29779	Soybean	cytosol	34.76	33.96
VIT_06s0004g04950.t01	Wine grape	cytosol	35.31	33.95
KRH23089	Soybean	cytosol	30.07	33.85
AT2G37650.1	Thale cress	cytosol	33.52	33.84
Solyc06g082530.1.1	Tomato	cytosol	30.48	33.84
VIT_13s0019g01790.t01	Wine grape	cytosol	33.52	33.8
AT3G46600.1	Thale cress	cytosol	27.17	33.79
AT5G59450.1	Thale cress	nucleus	28.41	33.77
KRH10241	Soybean	cytosol, nucleus, peroxisome	32.0	33.72
TraesCS4D01G136200.1	Wheat	cytosol	28.28	33.72
Bra028390.1-P	Field mustard	cytosol	32.83	33.71
KRH23091	Soybean	endoplasmic reticulum, plasma membrane	34.48	33.65
VIT_13s0019g01700.t01	Wine grape	cytosol	35.17	33.55
CDX86475	Canola	nucleus	32.83	33.52
Bra015584.1-P	Field mustard	cytosol	20.14	33.49
TraesCS4D01G136300.1	Wheat	cytosol	30.62	32.94
TraesCS3D01G354100.1	Wheat	cytosol, extracellular, nucleus	37.1	32.89
PGSC0003DMT400077972	Potato	cytosol	33.93	32.71
PGSC0003DMT400078286	Potato	nucleus	30.07	32.68
Solyc06g076280.1.1	Tomato	cytosol	33.66	32.62
TraesCS4D01G135900.1	Wheat	cytosol	28.69	32.6
AT2G29060.1	Thale cress	cytosol	31.03	32.42
KRH23090	Soybean	vacuole	27.72	32.37
TraesCS7D01G174100.1	Wheat	cytosol	31.31	32.34
CDY15616	Canola	nucleus	31.86	32.31
Bra030688.1-P	Field mustard	nucleus	33.1	32.3
TraesCS7D01G174300.1	Wheat	cytosol	32.28	32.1
CDX68388	Canola	cytosol	18.21	31.88
CDY06266	Canola	cytosol	27.45	31.49
TraesCS4D01G135500.1	Wheat	cytosol	27.86	31.27
CDX77228	Canola	cytosol	28.97	31.25
CDY31749	Canola	cytosol	31.17	31.13
Bra035653.1-P	Field mustard	cytosol	30.9	31.02
AT1G07530.1	Thale cress	cytosol	32.83	30.95
TraesCS4D01G136400.1	Wheat	mitochondrion	30.34	30.9
VIT_06s0004g04960.t01	Wine grape	nucleus	33.93	30.87
TraesCS4D01G332000.1	Wheat	cytosol	28.41	30.52
AT1G07520.3	Thale cress	cytosol	28.97	30.17
Bra031580.1-P	Field mustard	cytosol	28.55	30.0
CDY06265	Canola	cytosol	28.55	30.0
Bra031581.1-P	Field mustard	cytosol	27.59	29.94
CDY09912	Canola	cytosol	28.14	29.14
TraesCS4D01G136500.1	Wheat	peroxisome	30.76	29.07
CDY09911	Canola	nucleus	22.07	27.4
TraesCS4D01G266400.1	Wheat	cytosol	18.07	24.44
TraesCS5D01G419400.2	Wheat	cytosol	18.48	24.36
TraesCS2D01G198200.1	Wheat	cytosol	18.62	24.32
TraesCS2D01G220200.1	Wheat	cytosol	18.21	23.16
TraesCS3D01G403100.1	Wheat	cytosol	17.38	22.83
TraesCS2D01G393200.1	Wheat	cytosol	14.9	17.22

Protein Annotations

EnsemblPlants:TraesCS1D01G031000.1	EnsemblPlantsGene:TraesCS1D01G031000	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636	PANTHER:PTHR31636:SF60
PFAM:PF03514	PFscan:PS50985	MapMan:15.5.12	:	:	:

Description

No Description!

Coordinates

chr1D:-:12141576..12143753

Molecular Weight (calculated)

82105.9 Da

IEP (calculated)

7.368

GRAVY (calculated)

-0.382

Length

725 amino acids

Sequence
(BLAST)

001: MAVEPHLDDL DTAAATYQPY DRASSFQQQL TVDSYDLSGP LFLAQATTTG ASTYLHAAVT SPVLCKVNSS LQTAAGGSPE HSRSRSNDAL HYISQMLMED
101: VDERVEISQG EAALQAAEKP FRDLLGQVHP LATNPALLNS NNELASPDKS RTSRYKRLWS TSFSNDCPSY SMLQPFTTSL SPYICNRSLS LQNRPFTSVG
201: STSRSGFPGL HCQREVEEAT MFAPSIDKLV IYLENGILSI SKVTTKAKVG ERSENTIFEV AHQSDWDILE GRSNKHLAFT SCAIIRNENF DQVLLCYGLE
301: SFKKTTRLRR GLAEEGNKNS LKGRSEGHQK QWQRKQPRTE LVDLKILLIN CSQAVAEDNH LLASKLLKKI RQHSSADGDC SQRLAFYLAD GLEARLAGTG
401: CQVYRNLMER RTSTTDWLDA HSLFIASCPF VRTSYYFASQ AILDVSQGKP RVHIVDFGIG FGFQWPLMIQ KFAQQEEGAP KLRITGIDVP QPGFRPCEMI
501: EETGKRLADY ANMFKVPFQY QGIAASRWET IKIEDLNIDE DEVLIINCMF RMKNLGHETE AINSARDKVL KMMRMMNPKV FISGTVNGLR SSPFFIKRFK
601: EVMFHYSSMF DMLDANVIPR DNEARKMIET MIFGKDALNM IACEGAERTE RPESYRQWHA RCLKAGFQQL PVDPAILRII VYMKNTFWHE EFFAVEDRGW
701: LLQGWKGRVI YAISKWKPDE TYDGQ

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.