Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G176200.1 | Wheat | peroxisome | 95.05 | 90.9 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 95.05 | 90.33 |
| HORVU4Hr1G027920.1 | Barley | peroxisome | 89.57 | 86.63 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 58.15 | 61.18 |
| OQU84105 | Sorghum | cytosol | 56.58 | 59.45 |
| TraesCS7D01G174100.1 | Wheat | cytosol | 53.19 | 58.12 |
| Zm00001d048604_P001 | Maize | cytosol | 55.93 | 56.08 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 47.85 | 54.45 |
| KXG36217 | Sorghum | cytosol | 56.45 | 52.17 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 41.2 | 51.3 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 43.16 | 51.0 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 46.94 | 50.56 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 40.29 | 48.43 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 35.85 | 47.09 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 36.51 | 46.05 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 40.03 | 45.48 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 37.81 | 44.89 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 25.68 | 43.88 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 33.12 | 38.66 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 36.64 | 36.3 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 36.51 | 34.23 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 29.47 | 31.7 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 28.94 | 31.67 |
| Zm00001d048603_P001 | Maize | cytosol | 57.76 | 31.13 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 29.07 | 30.76 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 27.51 | 28.94 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 25.55 | 28.41 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 26.73 | 28.39 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 24.25 | 27.51 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 17.34 | 24.18 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 17.34 | 23.96 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 15.52 | 22.2 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 15.91 | 21.4 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 15.12 | 21.01 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 14.21 | 17.38 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G136500.1 | EnsemblPlantsGene:TraesCS4D01G136500 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4D:-:122300657..122303995
Molecular Weight (calculated)
84135.1 Da
IEP (calculated)
6.588
GRAVY (calculated)
-0.461
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPDEFLR AGDAEPFSPS LFLDLPPTPS PPRAPASDDL DFISRMLMEE DIDDKFFYQY PDHPAILSAQ HHFAQIISDS NTDDSANTAV ASSTFSSDSA
101: TARSASSCSD SATNTGKSTS SSHSATNTAH STSCSSSPGA FGPANPTWPY ERIDLSQPLH SPPYIGLGFP VDGANNLLFS GVGTPTSGYF GHTPALSRGN
201: NDHFVAPAGQ NGRSTGIQSF ATFANSSAAK DAKTLSNNGT EKAAKPATQP ACRGGPGTPA SAFFNGQTNG DVDMLNMAFR KGMEEANKFL PTNNTLDAIS
301: NRPVPRDFTG DQLKKEEVDR LRMLMFSNGR GRKNRHGVED LEAEAGRRCK LMMPEQEETG VGEMVEEIML HGHDIIMKGI EDLHIAMGTE AEKNHRKGTG
401: KAARGRRGAS EVDLRTMLIH CAQAVATGDH RGSNELLRQI KQHSSPKGDA TQRLAYCFAE GLEARLAGTG SHVYRSLVAK STSVGEFLRA YKLYMAASSF
501: KKWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG IPAKLETVHA EDLKIDPYEV LIVTSQYGFS NLMDESVIMD
601: RQDIPSPRDM VLTNIRKMRP DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP RDNDDRLLIE RDIFGPCALN VIACEGADRV DRPETYKQWQ
701: VRGHRAGLRQ VPLSPAVVKL VKDKVKSLYH KDFLIDVDNR WLLQGWKGRV LYAMSTWVAG DHDNSKF
101: TARSASSCSD SATNTGKSTS SSHSATNTAH STSCSSSPGA FGPANPTWPY ERIDLSQPLH SPPYIGLGFP VDGANNLLFS GVGTPTSGYF GHTPALSRGN
201: NDHFVAPAGQ NGRSTGIQSF ATFANSSAAK DAKTLSNNGT EKAAKPATQP ACRGGPGTPA SAFFNGQTNG DVDMLNMAFR KGMEEANKFL PTNNTLDAIS
301: NRPVPRDFTG DQLKKEEVDR LRMLMFSNGR GRKNRHGVED LEAEAGRRCK LMMPEQEETG VGEMVEEIML HGHDIIMKGI EDLHIAMGTE AEKNHRKGTG
401: KAARGRRGAS EVDLRTMLIH CAQAVATGDH RGSNELLRQI KQHSSPKGDA TQRLAYCFAE GLEARLAGTG SHVYRSLVAK STSVGEFLRA YKLYMAASSF
501: KKWPGLLQML AEREGGPPEV RITGIDVPQP GFRPAFQIEE TGRRLSKCAQ EFGVPFKYHG IPAKLETVHA EDLKIDPYEV LIVTSQYGFS NLMDESVIMD
601: RQDIPSPRDM VLTNIRKMRP DVFIDCVVNG TYSAPFFVTR FREALFTYSA QFDMLDATIP RDNDDRLLIE RDIFGPCALN VIACEGADRV DRPETYKQWQ
701: VRGHRAGLRQ VPLSPAVVKL VKDKVKSLYH KDFLIDVDNR WLLQGWKGRV LYAMSTWVAG DHDNSKF
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.