Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G077800.1 | Wheat | cytosol | 96.15 | 91.84 |
| TraesCS7D01G174300.1 | Wheat | cytosol | 93.45 | 89.99 |
| TraesCS7A01G173000.1 | Wheat | cytosol | 92.02 | 86.36 |
| Os11t0705200-01 | Rice | cytosol | 58.97 | 59.83 |
| OQU84105 | Sorghum | cytosol | 56.84 | 54.66 |
| Zm00001d048604_P001 | Maize | cytosol | 59.4 | 54.51 |
| TraesCS4D01G136500.1 | Wheat | peroxisome | 58.12 | 53.19 |
| TraesCS4D01G136000.1 | Wheat | cytosol | 47.72 | 51.62 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 45.01 | 51.3 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 49.0 | 51.04 |
| KXG36217 | Sorghum | cytosol | 60.11 | 50.84 |
| TraesCS4D01G136100.1 | Wheat | cytosol | 41.74 | 50.17 |
| TraesCS4D01G136200.1 | Wheat | cytosol | 41.6 | 48.03 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 47.86 | 47.19 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.63 | 46.33 |
| TraesCS4D01G135900.1 | Wheat | cytosol | 41.31 | 45.45 |
| TraesCS4D01G135500.1 | Wheat | cytosol | 40.6 | 44.12 |
| TraesCS4D01G332000.1 | Wheat | cytosol | 41.6 | 43.26 |
| TraesCS5D01G494900.1 | Wheat | cytosol | 35.76 | 38.2 |
| TraesCS5D01G152700.1 | Wheat | cytosol, plastid | 38.46 | 34.88 |
| TraesCS3D01G354100.1 | Wheat | cytosol, extracellular, nucleus | 40.17 | 34.47 |
| TraesCS1D01G030900.1 | Wheat | cytosol | 34.05 | 33.52 |
| TraesCS1D01G030800.1 | Wheat | cytosol | 32.48 | 32.52 |
| TraesCS1D01G031000.1 | Wheat | cytosol | 32.34 | 31.31 |
| TraesCS3D01G067900.1 | Wheat | nucleus | 30.06 | 30.58 |
| Zm00001d048603_P001 | Maize | cytosol | 61.4 | 30.29 |
| TraesCS1D01G031200.1 | Wheat | cytosol | 31.2 | 30.04 |
| TraesCS3D01G067700.1 | Wheat | cytosol | 30.63 | 29.78 |
| TraesCS3D01G067800.1 | Wheat | nucleus | 27.07 | 28.11 |
| TraesCS2D01G198200.1 | Wheat | cytosol | 20.94 | 26.49 |
| TraesCS5D01G419400.2 | Wheat | cytosol | 20.66 | 26.36 |
| TraesCS3D01G403100.1 | Wheat | cytosol | 20.37 | 25.91 |
| TraesCS4D01G266400.1 | Wheat | cytosol | 18.95 | 24.81 |
| TraesCS2D01G220200.1 | Wheat | cytosol | 18.8 | 23.16 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 17.66 | 19.78 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G174100.1 | EnsemblPlantsGene:TraesCS7D01G174100 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF59 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr7D:-:126505194..126507302
Molecular Weight (calculated)
77529.2 Da
IEP (calculated)
4.892
GRAVY (calculated)
-0.490
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMEEDIDDK FFYQYPDQPA ILDAQRPYEQ IISDTTTSSS ASPNGTTSSD GNAATSSSEE TNNSSWPYDP LELSQLLRSP PYLEDMLFGG LVPDSPADED
101: ARDSFLADAP AAGFQQSPAQ FKGAADWASA FSSQNGGSPG TQSSAVLNGP AEEKEAERKP PVMFSAGDGG QDGLLSAFFS NGGDMDMLNS AFLKGMEEAN
201: KFLPTNNTLL EAIPGKERGF TVKKKEEVAN GTPTSGNGRG RKYRHDEDDL EAETARSSKL MTPDNEETGA REMFDEIMLE EYEKCIQGIE ELRLVMDSEA
301: KKKSGKAARA KKSEAVDLRT MLVHCAQAVA AGDRRGATEL LRQIKQHSGP TGDATQRLAH CFADGLEARL AGTGSQVYQS LVAKRTSVVE FLKAYKLFMA
401: ACCFKKANFG FANKTILNAV AGKRRLHIVD FGVQYGLQWP GLMRWLAQRD GGPPEVRITG IDLPQPGFRP ARQVEETGRR LSSCARELGV PFRFHGVAAR
501: WDSVRGEDLR IDPGEVLVVH CQCGLSNLMD DSVAVTTDGG PSPRDVVLRN IRDMRPDVFV ECVANAGYGA PFFVTRFREA MFFYSAHFDM LDATLPRDNE
601: ERLLIERDII GRGALNVIAC EGADRVERPE TYRQWQARNR RAGLRQLPLD PEVVGMVREK VREHYHKDFL VDVDHQWLLQ GWKGRVLYAL STWVADDDSL
701: DA
101: ARDSFLADAP AAGFQQSPAQ FKGAADWASA FSSQNGGSPG TQSSAVLNGP AEEKEAERKP PVMFSAGDGG QDGLLSAFFS NGGDMDMLNS AFLKGMEEAN
201: KFLPTNNTLL EAIPGKERGF TVKKKEEVAN GTPTSGNGRG RKYRHDEDDL EAETARSSKL MTPDNEETGA REMFDEIMLE EYEKCIQGIE ELRLVMDSEA
301: KKKSGKAARA KKSEAVDLRT MLVHCAQAVA AGDRRGATEL LRQIKQHSGP TGDATQRLAH CFADGLEARL AGTGSQVYQS LVAKRTSVVE FLKAYKLFMA
401: ACCFKKANFG FANKTILNAV AGKRRLHIVD FGVQYGLQWP GLMRWLAQRD GGPPEVRITG IDLPQPGFRP ARQVEETGRR LSSCARELGV PFRFHGVAAR
501: WDSVRGEDLR IDPGEVLVVH CQCGLSNLMD DSVAVTTDGG PSPRDVVLRN IRDMRPDVFV ECVANAGYGA PFFVTRFREA MFFYSAHFDM LDATLPRDNE
601: ERLLIERDII GRGALNVIAC EGADRVERPE TYRQWQARNR RAGLRQLPLD PEVVGMVREK VREHYHKDFL VDVDHQWLLQ GWKGRVLYAL STWVADDDSL
701: DA
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.