CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048604_P001	Maize	cytosol	79.28	86.01
OQU84105	Sorghum	cytosol	61.45	69.86
Os11t0705200-01	Rice	cytosol	53.01	63.58
TraesCS7D01G174300.1	Wheat	cytosol	54.22	61.73
KXG29219	Sorghum	cytosol	50.84	61.25
TraesCS7B01G077800.1	Wheat	cytosol	53.86	60.82
TraesCS7B01G078300.1	Wheat	cytosol	53.73	60.43
TraesCS7D01G174100.1	Wheat	cytosol	50.84	60.11
TraesCS7A01G173000.1	Wheat	cytosol	54.1	60.03
HORVU4Hr1G027920.1	Barley	peroxisome	55.78	58.39
TraesCS4B01G141500.1	Wheat	peroxisome	55.18	56.75
TraesCS4D01G136500.1	Wheat	peroxisome	52.17	56.45
EES09053	Sorghum	cytosol	43.49	56.41
TraesCS4A01G176200.1	Wheat	peroxisome	53.73	55.61
OQU90003	Sorghum	cytosol	50.12	53.89
OQU84111	Sorghum	cytosol	43.37	53.41
OQU84115	Sorghum	cytosol	31.33	53.39
OQU84113	Sorghum	cytosol, nucleus, plastid	41.08	53.36
OQU84112	Sorghum	cytosol	44.82	51.88
EES16206	Sorghum	cytosol	45.54	51.78
KXG29223	Sorghum	cytosol	43.98	51.34
OQU83981	Sorghum	cytosol	29.4	49.09
OQU84116	Sorghum	nucleus	36.51	48.95
KXG29224	Sorghum	nucleus	40.72	48.77
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	46.14	47.58
KXG26392	Sorghum	cytosol	36.14	47.32
OQU83980	Sorghum	cytosol	35.3	47.18
KXG29228	Sorghum	cytosol	35.18	47.17
OQU84120	Sorghum	nucleus	35.54	46.53
OQU84114	Sorghum	mitochondrion	26.75	46.35
GSMUA_Achr5P08320_001	Banana	cytosol	24.94	46.1
OQU83979	Sorghum	plastid	32.89	44.98
KXG29232	Sorghum	cytosol	36.63	44.71
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	33.61	43.94
OQU83978	Sorghum	mitochondrion	32.53	42.65
OQU81651	Sorghum	cytosol	34.46	40.86
OQU92829	Sorghum	cytosol	35.54	40.19
KXG37250	Sorghum	cytosol	31.33	39.94
KXG38103	Sorghum	cytosol	28.92	38.34
EES01740	Sorghum	cytosol	36.27	37.3
KXG21080	Sorghum	cytosol	28.07	37.22
KXG21079	Sorghum	cytosol	27.71	36.92
OQU91407	Sorghum	nucleus	27.11	32.8
KXG38064	Sorghum	nucleus	28.07	32.36
EER91260	Sorghum	nucleus	27.71	31.9
EES18882	Sorghum	cytosol	27.95	31.65
OQU91406	Sorghum	nucleus	28.31	31.42
EES18880	Sorghum	cytosol	27.83	31.17
EER97449	Sorghum	cytosol	16.63	25.23
EER95348	Sorghum	cytosol	14.94	23.13
KXG33821	Sorghum	cytosol	15.54	22.67
EER97346	Sorghum	cytosol	15.42	22.46
EES18257	Sorghum	cytosol	15.18	22.38
EES05727	Sorghum	cytosol	14.46	19.08
EES12703	Sorghum	cytosol, nucleus, plastid	13.61	17.33

Protein Annotations

EnsemblPlants:KXG36217	EnsemblPlantsGene:SORBI_3002G301800	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:KXG36217	ProteinID:KXG36217.1	SEG:seg
UniParc:UPI00081AD66E	UniProt:A0A1B6QE64	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:67823450..67826962

Molecular Weight (calculated)

91565.1 Da

IEP (calculated)

4.831

GRAVY (calculated)

-0.474

Length

830 amino acids

Sequence
(BLAST)

001: MSATPEDFLA AQEGAAPYLA AQEPFSPSVF LDLPPTPPGR PTHDHDDDDD DDPDLVLPFI SRMLMEEDID DKFFYQFPDH PALLTAQQPY AQILSDSATA
101: SSPSEDSSNA AATATTTSSS GTSRTAGVNS TLSPSYDAPA SSPDPASWPP YDDPVYLSDL LRSPPYPSPD MGVGLDDFAG LLSPAAQGQD AAPAARFDFQ
201: QSPPFSDGGE GGGGEEDQRQ QPSFAAQRTG GAQHQRGSQS SAAFSSDKDE EEETKTESTT FPAADADHAA LASAFFGAQN EGNMDMLNMA FLKGMEEAKK
301: FLPTTNSLLI DLDEPSGKSL PKDRHSKTST DFAATQVQVK EEEEQVVNAI SIFGGSRSAN GRGRKNRHAE EDDLEAETGR SSKLMMPEQE ETGANELYNE
401: IMNCTYESFL KRMDDLRIAM GSETEKSARK VSRKGARGKQ SLVNEVVDLR TMLIHCAQSV ATGDRRSATE VLKQIKQHSS PRGDATQRLA HCFAMGLEAR
501: LAGTGSQAYQ SLMAQHTSVV DFLKAYRLYV AACCFMKVNF IFSHMTVVNA VVGRSKLHIV EYGVQHGFQY PGLFHLLARR EGGPPEVRVT AIAVPQPGFR
601: PAHQIEETGR RLSNIAREMG VPFKFRGIAA KWEAVRAKDL NLDPDEVLVV NSECYIGNLM DESVLVDSPS PRDTVLNNIR EMRPNVFIHT VVNGTYGAPF
701: FLTRFREALF FFSAQFDMID ATIPRDNAER LLIERNIFGS FAMNVIACEG ADRVERPETY KQWQVRNHRA GLRQLPLNPE VVKAARDKVK IYYHRDFLVD
801: EDNRWLLLGW KGRVLYAMST WVAEDNKPIF

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.