CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, cytosol

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09053	Sorghum	cytosol	65.84	82.81
KXG29219	Sorghum	cytosol	50.06	58.49
OQU84111	Sorghum	cytosol	45.34	54.15
OQU84105	Sorghum	cytosol	45.09	49.73
OQU84112	Sorghum	cytosol	43.6	48.95
OQU84113	Sorghum	cytosol, nucleus, plastid	38.76	48.83
KXG29224	Sorghum	nucleus	41.74	48.48
OQU84115	Sorghum	cytosol	29.32	48.46
KXG29223	Sorghum	cytosol	42.24	47.82
EES16206	Sorghum	cytosol	43.11	47.53
OQU84116	Sorghum	nucleus	36.02	46.85
OQU90003	Sorghum	cytosol	44.84	46.76
KXG36217	Sorghum	cytosol	47.58	46.14
OQU83981	Sorghum	cytosol	28.32	45.88
OQU84120	Sorghum	nucleus	35.9	45.58
KXG26392	Sorghum	cytosol	35.9	45.58
OQU84114	Sorghum	mitochondrion	26.83	45.09
KXG29228	Sorghum	cytosol	34.04	44.26
GSMUA_Achr5P08320_001	Banana	cytosol	24.6	44.1
OQU83980	Sorghum	cytosol	33.79	43.8
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	34.41	43.62
OQU83979	Sorghum	plastid	32.05	42.5
OQU83978	Sorghum	mitochondrion	33.17	42.18
KXG29232	Sorghum	cytosol	35.53	42.06
OQU81651	Sorghum	cytosol	34.41	39.57
KXG38103	Sorghum	cytosol	30.68	39.46
KXG21079	Sorghum	cytosol	29.94	38.68
KXG21080	Sorghum	cytosol	29.07	37.38
OQU92829	Sorghum	cytosol	33.91	37.19
KXG37250	Sorghum	cytosol	29.19	36.1
EES01740	Sorghum	cytosol	33.79	33.71
OQU91407	Sorghum	nucleus	27.08	31.78
EER91260	Sorghum	nucleus	28.45	31.76
KXG38064	Sorghum	nucleus	27.7	30.97
EES18882	Sorghum	cytosol	28.07	30.83
EES18880	Sorghum	cytosol	27.33	29.69
OQU91406	Sorghum	nucleus	27.08	29.14
EER97449	Sorghum	cytosol	17.39	25.59
EES18257	Sorghum	cytosol	16.77	23.98
KXG33821	Sorghum	cytosol	16.52	23.37
EER95348	Sorghum	cytosol	15.53	23.32
EER97346	Sorghum	cytosol	16.27	22.98
EES05727	Sorghum	cytosol	14.53	18.6
EES12703	Sorghum	cytosol, nucleus, plastid	12.92	15.95

Protein Annotations

EnsemblPlants:OQU84106	EnsemblPlantsGene:SORBI_3005G229600	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005202	InterPro:TF_GRAS	PANTHER:PTHR31636
PANTHER:PTHR31636:SF41	PFAM:PF03514	PFscan:PS50985	ProteinID:OQU84106	ProteinID:OQU84106.1	SEG:seg
UniParc:UPI000B8B9AA8	UniProt:A0A1Z5RL63	MapMan:15.5.12	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:71661965..71666149

Molecular Weight (calculated)

89122.2 Da

IEP (calculated)

6.820

GRAVY (calculated)

-0.325

Length

805 amino acids

Sequence
(BLAST)

001: MHVQHEQIQN IVMYLVQCIV SLLCSSSKKI NKKIVGSHYF TLFQRSSLAG AWHKKTACLQ IDVFSSLSRS KKKDSVFIHP RPTTTRPPSV AAMAASPEVF
101: LPDLEEPFSP SVFLDLPPTP RSDGNGDGKD PASDDIVLPF IERMLMEEGI DEEFLYQYPC HPALLQAQES YAQVLSEPTA DSSSDGRLSV SVSSGSDAGV
201: GADDLTADAI TASEQSPARL GDAGVRSDER PAQLGYAGTA ARSDAAAEEE VEKKANSTML AVVDGLNSAF FSAQQDGGGK AMFLKGMEEA NKFLPRDIDL
301: LRGGSATVIQ VNEEESANGR GRENRHNRDG VLEANLGRES KMMAPEPEES GVVVDEMVAN GFQLFFREME GLRISMGSEA EKKSRKGSVR SAKGVVDLCT
401: LLMHCAQAVA VDDRRSAAEL LWKIKQHSSP RGDATQRLAH YFAEGLEARL AGSGSKLYNS LMAKRTSAVD FLKAYRLYAA ACCFRVVAFK FSNMTICKSI
501: AGRKRVHIVD YGIQYGSQWP GLLKCLSICP GGPPEVRITG IDLPQPGFRP ASQVKETGRR LSNYASQVGM PFKYRGIAAK WETVGVDDLD IDPDEVLIVN
601: SILHFGNLMD EGIDTSSPSP RDVVLSNIRK MRPDAFILFV TNGTYSSPYF VQRFREALFH YSAMFDMMDA TTPRDNDLRV LVERDLFGQC AQNVIACEGL
701: DRVERPETYK KWQLRNHRAG LRQLPLDPDI VKAVQESVRD KFHEDFVIDV DRQWLLGGWK GRILYAMSTW AAADSMQLQQ KEVVRFKITL PQNRSCQHCK
801: KSSFR

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.