Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84115 | Sorghum | cytosol | 48.79 | 62.01 |
| OQU83981 | Sorghum | cytosol | 46.69 | 58.15 |
| OQU83980 | Sorghum | cytosol | 55.09 | 54.91 |
| OQU83979 | Sorghum | plastid | 53.47 | 54.53 |
| OQU83978 | Sorghum | mitochondrion | 54.28 | 53.08 |
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 53.31 | 51.97 |
| Os11t0706200-00 | Rice | nucleus | 47.01 | 49.07 |
| OQU81651 | Sorghum | cytosol | 53.8 | 47.57 |
| OQU84116 | Sorghum | nucleus | 43.3 | 43.3 |
| OQU84111 | Sorghum | cytosol | 47.01 | 43.18 |
| KXG29219 | Sorghum | cytosol | 47.01 | 42.24 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 42.65 | 41.31 |
| OQU84114 | Sorghum | mitochondrion | 31.5 | 40.71 |
| OQU84112 | Sorghum | cytosol | 46.53 | 40.17 |
| OQU84105 | Sorghum | cytosol | 47.17 | 40.0 |
| OQU84120 | Sorghum | nucleus | 40.55 | 39.59 |
| EES16206 | Sorghum | cytosol | 45.07 | 38.22 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 27.63 | 38.08 |
| KXG29223 | Sorghum | cytosol | 43.62 | 37.97 |
| KXG29224 | Sorghum | nucleus | 42.49 | 37.95 |
| KXG26392 | Sorghum | cytosol | 38.61 | 37.7 |
| EES09053 | Sorghum | cytosol | 38.77 | 37.5 |
| KXG29232 | Sorghum | cytosol | 40.71 | 37.06 |
| OQU90003 | Sorghum | cytosol | 44.91 | 36.01 |
| KXG36217 | Sorghum | cytosol | 47.17 | 35.18 |
| KXG38103 | Sorghum | cytosol | 34.57 | 34.19 |
| OQU84106 | Sorghum | cytosol, endoplasmic reticulum, plastid | 44.26 | 34.04 |
| OQU92829 | Sorghum | cytosol | 38.93 | 32.83 |
| KXG21080 | Sorghum | cytosol | 33.12 | 32.75 |
| KXG21079 | Sorghum | cytosol | 32.63 | 32.42 |
| KXG37250 | Sorghum | cytosol | 32.47 | 30.88 |
| OQU91407 | Sorghum | nucleus | 32.47 | 29.3 |
| EER91260 | Sorghum | nucleus | 33.93 | 29.13 |
| KXG38064 | Sorghum | nucleus | 33.44 | 28.75 |
| EES01740 | Sorghum | cytosol | 36.51 | 28.0 |
| OQU91406 | Sorghum | nucleus | 33.6 | 27.81 |
| EES18882 | Sorghum | cytosol | 32.47 | 27.42 |
| EES18880 | Sorghum | cytosol | 32.31 | 26.99 |
| EER97449 | Sorghum | cytosol | 20.36 | 23.03 |
| EER95348 | Sorghum | cytosol | 19.71 | 22.76 |
| KXG33821 | Sorghum | cytosol | 18.9 | 20.56 |
| EER97346 | Sorghum | cytosol | 18.9 | 20.53 |
| EES18257 | Sorghum | cytosol | 17.77 | 19.54 |
| EES05727 | Sorghum | cytosol | 18.42 | 18.12 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 16.8 | 15.95 |
Protein Annotations
| EnsemblPlants:KXG29228 | EnsemblPlantsGene:SORBI_3005G230600 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 |
| PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:KXG29228 | ProteinID:KXG29228.1 | SEG:seg |
| UniParc:UPI00081AB54E | UniProt:A0A1B6PU83 | MapMan:15.5.12 | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:71707275..71711592
Molecular Weight (calculated)
70578.6 Da
IEP (calculated)
6.699
GRAVY (calculated)
-0.386
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTPEEFFM EGLMNLSPPS PSVLLDLPQM TNDVGQDSLC PDEIVLSYVS SVLMEDQSED KLLCQDTDHP SLLQVQKPFS QILSSPSFST NSDNTVNRDN
101: IEGARNLFQD CSGDQCTLRS SLSIGALAAG SVLKGMEEAS RFLSEDNVFR KDQQLNQMTR ESGNSRVFKK RYNRDEDGEV GRAYKVFMMM EELEEMFDKM
201: MLRGYETCIE EMKKLRITKA DEAKNKKKGY NKRRSNVVDL YTLLINCAQA VSASNFRTAH ELLKQIKQHA SATGDATQRL AQCFAKGLEA RLMGTGRQLW
301: QLLTLEQPLA IEYLKAYNLY MATCSFNRVA LFFNVMTIEH AMVGKSKLHI VDYGPHHGFQ WAGLLRWMAN REGGPPEVRI TAISRLQPRS CPSEGTDDTG
401: RRLDKCAREF GVPFKFHAIT AKWETISIDD LKTEADEVLV VVDLFSFSIL REENIYFDGL SSRDTVLNNI RKMRPDVFIQ GIMNCSHSTS FLTRFREALF
501: SYSALFDMLD ATIPRDSKLR PVLEQNMLGH SVLNLVACEG ADVVNRPEKY RRWQVRNQRA GLRQLPLKPN IVKVLKDKVM KDHHKDFFIS EDGQWLLQGW
601: MGRIFYAHST WVAEDTISE
101: IEGARNLFQD CSGDQCTLRS SLSIGALAAG SVLKGMEEAS RFLSEDNVFR KDQQLNQMTR ESGNSRVFKK RYNRDEDGEV GRAYKVFMMM EELEEMFDKM
201: MLRGYETCIE EMKKLRITKA DEAKNKKKGY NKRRSNVVDL YTLLINCAQA VSASNFRTAH ELLKQIKQHA SATGDATQRL AQCFAKGLEA RLMGTGRQLW
301: QLLTLEQPLA IEYLKAYNLY MATCSFNRVA LFFNVMTIEH AMVGKSKLHI VDYGPHHGFQ WAGLLRWMAN REGGPPEVRI TAISRLQPRS CPSEGTDDTG
401: RRLDKCAREF GVPFKFHAIT AKWETISIDD LKTEADEVLV VVDLFSFSIL REENIYFDGL SSRDTVLNNI RKMRPDVFIQ GIMNCSHSTS FLTRFREALF
501: SYSALFDMLD ATIPRDSKLR PVLEQNMLGH SVLNLVACEG ADVVNRPEKY RRWQVRNQRA GLRQLPLKPN IVKVLKDKVM KDHHKDFFIS EDGQWLLQGW
601: MGRIFYAHST WVAEDTISE
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.