CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048588_P001	Maize	cytosol	58.51	65.62
OQU84112	Sorghum	cytosol	57.67	57.18
KXG29219	Sorghum	cytosol	50.63	52.25
OQU84111	Sorghum	cytosol	49.09	51.78
KXG29224	Sorghum	nucleus	48.52	49.78
EES09053	Sorghum	cytosol	44.73	49.69
OQU84105	Sorghum	cytosol	49.65	48.36
OQU90003	Sorghum	cytosol	50.77	46.76
OQU84113	Sorghum	cytosol, nucleus, plastid	41.49	46.17
GSMUA_Achr5P08320_001	Banana	cytosol	28.69	45.43
OQU84116	Sorghum	nucleus	39.38	45.23
OQU84115	Sorghum	cytosol	30.66	44.76
KXG36217	Sorghum	cytosol	51.34	43.98
KXG29228	Sorghum	cytosol	37.97	43.62
OQU84120	Sorghum	nucleus	38.4	43.06
EES16206	Sorghum	cytosol	44.16	43.01
KXG26392	Sorghum	cytosol	38.26	42.9
OQU84106	Sorghum	cytosol, endoplasmic reticulum, plastid	47.82	42.24
OQU84114	Sorghum	mitochondrion	28.41	42.17
OQU83981	Sorghum	cytosol	28.55	40.85
OQU83980	Sorghum	cytosol	35.58	40.74
OQU84119	Sorghum	cytosol, extracellular, mitochondrion, plastid	36.29	40.63
OQU83979	Sorghum	plastid	34.32	40.2
KXG29232	Sorghum	cytosol	38.4	40.15
OQU83978	Sorghum	mitochondrion	33.47	37.6
OQU81651	Sorghum	cytosol	36.01	36.57
KXG38103	Sorghum	cytosol	31.5	35.78
KXG21080	Sorghum	cytosol	30.94	35.14
OQU92829	Sorghum	cytosol	35.87	34.74
KXG21079	Sorghum	cytosol	30.1	34.35
EES01740	Sorghum	cytosol	38.68	34.08
KXG37250	Sorghum	cytosol	30.94	33.79
EER91260	Sorghum	nucleus	30.66	30.24
OQU91407	Sorghum	nucleus	29.11	30.17
KXG38064	Sorghum	nucleus	29.96	29.58
EES18880	Sorghum	cytosol	29.96	28.74
EES18882	Sorghum	cytosol	29.25	28.38
OQU91406	Sorghum	nucleus	29.54	28.07
EER97449	Sorghum	cytosol	19.55	25.41
EER95348	Sorghum	cytosol	18.28	24.25
EER97346	Sorghum	cytosol	18.57	23.16
EES18257	Sorghum	cytosol	18.28	23.09
KXG33821	Sorghum	cytosol	18.42	23.02
EES05727	Sorghum	cytosol	17.16	19.4
EES12703	Sorghum	cytosol, nucleus, plastid	15.05	16.41

Protein Annotations

MapMan:15.5.12	UniProt:A0A1B6PU88	GO:GO:0003674	GO:GO:0003824	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016491
InterPro:IPR005202	EnsemblPlants:KXG29223	ProteinID:KXG29223	ProteinID:KXG29223.1	PFAM:PF03514	PFscan:PS50985
PANTHER:PTHR31636	PANTHER:PTHR31636:SF41	EnsemblPlantsGene:SORBI_3005G230000	InterPro:TF_GRAS	UniParc:UPI00081AE458	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:71680491..71683411

Molecular Weight (calculated)

78467.0 Da

IEP (calculated)

5.143

GRAVY (calculated)

-0.447

Length

711 amino acids

Sequence
(BLAST)

001: MAATPEDVAD PEPFSPSLFL DLPPTPHPHH PDGEGDGEDD LQVLPFISRM LMEEEGTDDD AILYQEYPDH HPALLRAKQP FAQILSAPAA ATDSVSGPVT
101: TNSAFDAFAD ATWPYDPVEL SELLFSRTRS GTGVGVHGFT GGADAANSFS SPGPGVGQGS ASACGQARAF FNAGDTATIQ SSSIGDGGVA VTMDMLNQAF
201: LKGMEEANKF LPTTTTTIFG PDATSREHLP ISSVVDYGRV SGRGCKNRHN WDDDDDDTGR RSNKLLAPEP EKNGEQVDAV FVQGYEMAIE KMHGLSISND
301: NNNNGKAKRK SASQGDEAVD LRTLLTHCAE AVSTGDRRSA TELLRQIRQR SSPRGDASQR LAHCFAEALE ARLAGTGALV AARRTSGSGG VDFLRAYKLY
401: LEVCSFKMIA FKFAHIAICK AINITGRKKV HIVEYGDHHG LHWPPLLEAW SKDRDGGPPE VRITSIDCPQ PGFRPAARIE ETGRRLSDFA RRRGVPFRFR
501: SVVASKWETV CADDLDIEPD DDDDEVLVVN GLFHFGRLMD EGVDIDNTSP RDMVLRNIQK MRPDVFILCV ENSSYNAPFF VTRFREALFY YSAMFDMMET
601: TTPRRDSEER LLVEQDILGA CVLNAIACEG SERVERPETY KQWQVRGHRA GLKQLPLNPN TVKYLTRKVK DGYHKDFVVD VDQQWLLQGW KGRILYAMST
701: WVADHTQLSQ S

Best Arabidopsis Sequence Match ( AT1G07530.1 )
(BLAST)

001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

Arabidopsis Description

SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.