Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002573_P001 | Maize | cytosol | 87.12 | 91.17 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 86.81 | 90.85 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 71.93 | 75.77 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 67.18 | 69.86 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 67.02 | 69.26 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 66.87 | 69.1 |
| EES05727 | Sorghum | cytosol | 57.98 | 60.1 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 34.05 | 57.66 |
| GSMUA_AchrUn_... | Banana | plastid | 44.33 | 49.4 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 42.33 | 49.11 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 43.71 | 48.8 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 40.34 | 46.14 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 38.8 | 44.46 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 32.06 | 43.09 |
| CDY27821 | Canola | cytosol | 28.99 | 42.57 |
| CDY00533 | Canola | cytosol | 28.83 | 42.15 |
| Bra028312.1-P | Field mustard | cytosol | 28.99 | 41.63 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 34.97 | 38.71 |
| Solyc06g036170.1.1 | Tomato | nucleus | 34.51 | 37.63 |
| PGSC0003DMT400076932 | Potato | nucleus | 34.51 | 37.13 |
| CDX91655 | Canola | cytosol | 32.82 | 36.39 |
| Solyc03g025170.1.1 | Tomato | nucleus | 34.97 | 36.13 |
| CDY27063 | Canola | cytosol, plastid | 31.9 | 36.11 |
| Bra022596.1-P | Field mustard | plastid | 31.9 | 35.92 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 35.28 | 35.17 |
| KRG91573 | Soybean | plastid | 31.9 | 35.02 |
| KRH35251 | Soybean | plastid | 31.6 | 34.92 |
| AT5G52510.1 | Thale cress | nucleus | 34.2 | 34.84 |
| KRH38397 | Soybean | plastid | 27.3 | 32.96 |
| KRH08880 | Soybean | plastid | 32.67 | 32.42 |
| KXG33821 | Sorghum | cytosol | 25.0 | 28.65 |
| EES18257 | Sorghum | cytosol | 24.69 | 28.6 |
| EER97449 | Sorghum | cytosol | 22.09 | 26.33 |
| EER95348 | Sorghum | cytosol | 20.86 | 25.37 |
| EER97346 | Sorghum | cytosol | 21.93 | 25.09 |
| OQU83981 | Sorghum | cytosol | 15.34 | 20.12 |
| OQU84115 | Sorghum | cytosol | 14.57 | 19.51 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 17.48 | 17.84 |
| OQU84120 | Sorghum | nucleus | 17.33 | 17.82 |
| OQU84116 | Sorghum | nucleus | 16.72 | 17.61 |
| OQU84111 | Sorghum | cytosol | 18.1 | 17.51 |
| OQU83979 | Sorghum | plastid | 15.8 | 16.97 |
| KXG29228 | Sorghum | cytosol | 15.95 | 16.8 |
| OQU81651 | Sorghum | cytosol | 17.94 | 16.71 |
| KXG37250 | Sorghum | cytosol | 16.56 | 16.59 |
| OQU83978 | Sorghum | mitochondrion | 15.95 | 16.43 |
| OQU83980 | Sorghum | cytosol | 15.64 | 16.43 |
| KXG21080 | Sorghum | cytosol | 15.64 | 16.29 |
| KXG26392 | Sorghum | cytosol | 15.64 | 16.09 |
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 15.64 | 16.06 |
| EES09053 | Sorghum | cytosol | 15.49 | 15.78 |
| KXG29219 | Sorghum | cytosol | 16.41 | 15.53 |
| KXG38103 | Sorghum | cytosol | 14.88 | 15.5 |
| KXG29224 | Sorghum | nucleus | 16.41 | 15.44 |
| KXG21079 | Sorghum | cytosol | 14.72 | 15.41 |
| OQU84114 | Sorghum | mitochondrion | 11.2 | 15.24 |
| EES16206 | Sorghum | cytosol | 17.02 | 15.21 |
| OQU84112 | Sorghum | cytosol | 16.72 | 15.2 |
| KXG29223 | Sorghum | cytosol | 16.41 | 15.05 |
| KXG29232 | Sorghum | cytosol | 15.64 | 15.0 |
| OQU84105 | Sorghum | cytosol | 16.56 | 14.79 |
| OQU90003 | Sorghum | cytosol | 17.18 | 14.51 |
| OQU92829 | Sorghum | cytosol | 16.26 | 14.44 |
| OQU91407 | Sorghum | nucleus | 15.03 | 14.29 |
| KXG38064 | Sorghum | nucleus | 15.64 | 14.17 |
| EES18880 | Sorghum | cytosol | 15.49 | 13.63 |
| KXG36217 | Sorghum | cytosol | 17.33 | 13.61 |
| EES01740 | Sorghum | cytosol | 16.72 | 13.51 |
| EES18882 | Sorghum | cytosol | 15.03 | 13.37 |
| EER91260 | Sorghum | nucleus | 14.57 | 13.18 |
| OQU91406 | Sorghum | nucleus | 15.03 | 13.1 |
| OQU84106 | Sorghum | cytosol, endoplasmic reticulum, plastid | 15.95 | 12.92 |
Protein Annotations
| MapMan:15.5.12 | EntrezGene:8060431 | UniProt:C5YEH2 | EnsemblPlants:EES12703 | ProteinID:EES12703 | ProteinID:EES12703.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR005202 |
| PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF127 | EnsemblPlantsGene:SORBI_3006G188900 | InterPro:TF_GRAS |
| UniParc:UPI0001A87764 | RefSeq:XP_002448375.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:54345286..54347244
Molecular Weight (calculated)
68658.0 Da
IEP (calculated)
6.453
GRAVY (calculated)
-0.157
Length
652 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGAPWRDP RQGYAYGVGS AMQMQLQQRA DAAAGGGVLK RSLGELERWQ HHQQQQVAAQ QELYLRTVRQ RTAAAVDIAA LLGGTPARPL VLPGSSFGGG
101: LASPSSTLSS LTTASRAAVP LMQPQLQRQV PLMTSSPQTQ AFGLSRAPPL PQPASSSELF ILQELEKQLL DDDDDDDEPV AAMSGTGSAV TNSEWEETIQ
201: QFSSIAAAAM SGTGSAVTNS EWEETIQQLS SIAAAPSPGL PAAATPNNNI NNNNNVGMTR SPSNSSSSTA SSSASCSPPA SRQLLSEAAV AIADGHHDAA
301: ATHLAALKRA ANQHGDAEQR LIAMMVDALS SRIGRAASAP AQHLAELCSG DQRAGSQLLQ DISPCFRVAL HAASVAIVEA VGDHRAIHVV DFDVSLAQHA
401: ALIQYLAERR VQGRSLKVTA VTDPSSPFSQ AQTASLTTIA EPLKKLAERA GVEYRFNVVS CRAADLDASR LCCEPGEAVA VNLAFALSHV PDESVSPANP
501: RDELLRRVRA LGPQVVTLVE QELNTNTAPL AARFTDACAH YGAILESLDA TLGRETSAEK ARAAEAALWK KAANAVGRDG PDRLERCEVF GKWRARFGMA
601: GFRPVSLGSG IAEQLVGARV GLLPPAFAVK AENGVLRLCW KGRVVTVASA WR
101: LASPSSTLSS LTTASRAAVP LMQPQLQRQV PLMTSSPQTQ AFGLSRAPPL PQPASSSELF ILQELEKQLL DDDDDDDEPV AAMSGTGSAV TNSEWEETIQ
201: QFSSIAAAAM SGTGSAVTNS EWEETIQQLS SIAAAPSPGL PAAATPNNNI NNNNNVGMTR SPSNSSSSTA SSSASCSPPA SRQLLSEAAV AIADGHHDAA
301: ATHLAALKRA ANQHGDAEQR LIAMMVDALS SRIGRAASAP AQHLAELCSG DQRAGSQLLQ DISPCFRVAL HAASVAIVEA VGDHRAIHVV DFDVSLAQHA
401: ALIQYLAERR VQGRSLKVTA VTDPSSPFSQ AQTASLTTIA EPLKKLAERA GVEYRFNVVS CRAADLDASR LCCEPGEAVA VNLAFALSHV PDESVSPANP
501: RDELLRRVRA LGPQVVTLVE QELNTNTAPL AARFTDACAH YGAILESLDA TLGRETSAEK ARAAEAALWK KAANAVGRDG PDRLERCEVF GKWRARFGMA
601: GFRPVSLGSG IAEQLVGARV GLLPPAFAVK AENGVLRLCW KGRVVTVASA WR
001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
Arabidopsis Description
SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.