Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022596.1-P | Field mustard | plastid | 97.05 | 96.55 |
| CDX91655 | Canola | cytosol | 92.36 | 90.48 |
| CDY27821 | Canola | cytosol | 61.28 | 79.5 |
| CDY00533 | Canola | cytosol | 60.94 | 78.7 |
| AT5G52510.1 | Thale cress | nucleus | 77.6 | 69.84 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 49.83 | 48.73 |
| KRH35251 | Soybean | plastid | 46.53 | 45.42 |
| KRG91573 | Soybean | plastid | 46.53 | 45.12 |
| KRH08880 | Soybean | plastid | 50.69 | 44.44 |
| Solyc03g025170.1.1 | Tomato | nucleus | 48.44 | 44.22 |
| KRH38397 | Soybean | plastid | 41.15 | 43.89 |
| Solyc06g036170.1.1 | Tomato | nucleus | 45.49 | 43.81 |
| PGSC0003DMT400076932 | Potato | nucleus | 46.01 | 43.73 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 48.09 | 42.35 |
| GSMUA_AchrUn_... | Banana | plastid | 40.1 | 39.49 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 38.89 | 38.36 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 37.85 | 38.31 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 36.98 | 37.9 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 30.73 | 36.49 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 36.11 | 36.49 |
| Os02t0681900-01 | Rice | cytosol | 38.54 | 35.92 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 37.85 | 35.22 |
| Zm00001d051461_P001 | Maize | cytosol | 36.81 | 34.93 |
| CDY71156 | Canola | cytosol, plastid | 23.61 | 34.87 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 38.02 | 34.71 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 37.67 | 34.61 |
| Zm00001d002573_P001 | Maize | cytosol | 36.81 | 34.03 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 37.15 | 33.91 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 36.63 | 33.87 |
| EES05727 | Sorghum | cytosol | 36.98 | 33.86 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 36.11 | 31.9 |
| CDY00883 | Canola | cytosol | 22.4 | 31.85 |
| CDX68389 | Canola | cytosol | 4.69 | 31.76 |
| CDY37124 | Canola | nucleus | 23.09 | 31.67 |
| CDY22807 | Canola | nucleus | 23.09 | 31.67 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 20.31 | 30.39 |
| CDY07309 | Canola | cytosol | 12.5 | 30.0 |
| CDY54511 | Canola | cytosol, nucleus, plastid | 25.35 | 29.38 |
| CDY19966 | Canola | cytosol | 25.0 | 29.15 |
| CDY61060 | Canola | cytosol | 27.26 | 29.13 |
| CDY05700 | Canola | cytosol, plastid | 25.0 | 28.97 |
| CDY00074 | Canola | cytosol, plastid | 25.0 | 28.97 |
| CDY71174 | Canola | cytosol, plastid | 25.0 | 28.97 |
| CDX86324 | Canola | cytosol, nucleus, plastid | 24.83 | 28.77 |
| CDY00377 | Canola | cytosol | 26.91 | 28.18 |
| CDY50240 | Canola | cytosol | 27.78 | 27.78 |
| CDX80265 | Canola | endoplasmic reticulum, golgi | 15.28 | 27.76 |
| CDY68224 | Canola | cytosol | 27.6 | 27.6 |
| CDY58168 | Canola | plastid | 24.65 | 26.79 |
| CDY50128 | Canola | cytosol, plastid | 24.65 | 26.64 |
| CDY35589 | Canola | cytosol | 23.96 | 25.99 |
| CDY42968 | Canola | cytosol | 24.13 | 25.98 |
| CDY39530 | Canola | cytosol | 21.01 | 19.55 |
| CDX82987 | Canola | nucleus | 19.97 | 19.13 |
| CDY47877 | Canola | nucleus | 20.49 | 19.09 |
| CDY33040 | Canola | nucleus | 19.44 | 18.76 |
| CDY71578 | Canola | nucleus, plastid | 16.32 | 18.04 |
| CDY06266 | Canola | cytosol | 19.1 | 17.41 |
| CDX68388 | Canola | cytosol | 12.33 | 17.15 |
| CDX86475 | Canola | nucleus | 20.83 | 16.9 |
| CDY07777 | Canola | cytosol, nucleus, peroxisome | 19.44 | 16.64 |
| CDX79750 | Canola | peroxisome | 19.44 | 16.62 |
| CDY15616 | Canola | nucleus | 19.97 | 16.08 |
| CDY47878 | Canola | nucleus | 19.1 | 15.92 |
| CDY06265 | Canola | cytosol | 18.92 | 15.8 |
| CDY09912 | Canola | cytosol | 18.58 | 15.29 |
| CDX77228 | Canola | cytosol | 17.53 | 15.03 |
| CDY31749 | Canola | cytosol | 18.58 | 14.74 |
| CDY09911 | Canola | nucleus | 14.06 | 13.87 |
Protein Annotations
| MapMan:15.5.12 | GO:A0A078GR26 | UniProt:A0A078GR26 | EnsemblPlants:CDY27063 | ProteinID:CDY27063 | ProteinID:CDY27063.1 |
| ncoils:Coil | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00036880001 | InterPro:IPR005202 | PFAM:PF03514 | PFscan:PS50985 |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF130 | InterPro:Scarecrow-like_8 | InterPro:TF_GRAS | UniParc:UPI0004EE971B | SEG:seg |
Description
BnaA02g10830DBnaA02g10830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GR26]
Coordinates
chrLK032199:-:269894..271624
Molecular Weight (calculated)
62159.7 Da
IEP (calculated)
5.563
GRAVY (calculated)
-0.265
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSGFPSGGG DGRSIPGGFG TVVNNNPQPT YRSQSPGIFL DQTGNRFSGG KRTLADFQAA QQQQAAVNAF LLRSVKPRTY QNLHSPTIGL TSVNDMGLFG
101: GSSQTQHQSD LFGIRMGYGS SIEPVQNLNR VEESKNMLSS SLRELEKQLL EDDDESDAQG GGDDVSTITH SNSDWLHRVL TPVLSSSPSS ASSPSTTCSR
201: QTVMEIAAAV AEGKTETAAE LLACVSPTPN QKTNSEERLV NFMVTALRLR INPAERRASP SPATATELYG KEHLISTQLL YELSPCFKLG FMAANLAILD
301: AAGDNHDGEV LMHVVDFEIG GGGQYVNLLH ALSTRRCGDD KPLVVKITAV TNDGGEERLK AVGDRLSQLG DRLGVSLRFN VVASLRLGDI SRESLGCGPD
401: EPLAVNLAFK LYRVPDESVC MENPRDALLR RVKGLEPRVV TLVEQEMNSN TAPFLGRVSE ACACYGALLD SVESSVASSN LDRAKVEEGI GRKLINAVAC
501: EGIDRIERCE VFGKWRMRMS MAGFELMPVS EKIAESMKSR LGNGNRVHSC FTVKEDDGGV CFGWMGRTLA VASAWR
101: GSSQTQHQSD LFGIRMGYGS SIEPVQNLNR VEESKNMLSS SLRELEKQLL EDDDESDAQG GGDDVSTITH SNSDWLHRVL TPVLSSSPSS ASSPSTTCSR
201: QTVMEIAAAV AEGKTETAAE LLACVSPTPN QKTNSEERLV NFMVTALRLR INPAERRASP SPATATELYG KEHLISTQLL YELSPCFKLG FMAANLAILD
301: AAGDNHDGEV LMHVVDFEIG GGGQYVNLLH ALSTRRCGDD KPLVVKITAV TNDGGEERLK AVGDRLSQLG DRLGVSLRFN VVASLRLGDI SRESLGCGPD
401: EPLAVNLAFK LYRVPDESVC MENPRDALLR RVKGLEPRVV TLVEQEMNSN TAPFLGRVSE ACACYGALLD SVESSVASSN LDRAKVEEGI GRKLINAVAC
501: EGIDRIERCE VFGKWRMRMS MAGFELMPVS EKIAESMKSR LGNGNRVHSC FTVKEDDGGV CFGWMGRTLA VASAWR
001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
Arabidopsis Description
SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.