Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002573_P001 | Maize | cytosol | 92.13 | 92.13 |
| EES12703 | Sorghum | cytosol, nucleus, plastid | 90.85 | 86.81 |
| Os04t0580300-01 | Rice | cytosol, nucleus, plastid | 74.96 | 75.44 |
| TraesCS2D01G393200.1 | Wheat | cytosol | 70.14 | 69.7 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 70.31 | 69.41 |
| TraesCS2A01G395400.1 | Wheat | cytosol, mitochondrion, nucleus | 69.98 | 69.1 |
| Zm00001d051461_P001 | Maize | cytosol | 58.59 | 60.13 |
| HORVU2Hr1G094040.2 | Barley | cytosol, plastid | 37.08 | 60.0 |
| GSMUA_AchrUn_... | Banana | plastid | 47.03 | 50.09 |
| GSMUA_Achr5P12810_001 | Banana | cytosol, plastid | 44.3 | 49.11 |
| GSMUA_Achr4P26400_001 | Banana | cytosol, mitochondrion, plastid | 45.59 | 48.63 |
| GSMUA_Achr1P03650_001 | Banana | mitochondrion | 43.34 | 47.37 |
| GSMUA_Achr9P18770_001 | Banana | cytosol | 41.73 | 45.69 |
| GSMUA_Achr4P24960_001 | Banana | cytosol | 34.67 | 44.54 |
| CDY27821 | Canola | cytosol | 31.3 | 43.92 |
| CDY00533 | Canola | cytosol | 31.14 | 43.5 |
| Bra028312.1-P | Field mustard | cytosol | 31.3 | 42.95 |
| VIT_16s0050g00950.t01 | Wine grape | cytosol, nucleus, plastid | 36.44 | 38.54 |
| Solyc06g036170.1.1 | Tomato | nucleus | 36.44 | 37.96 |
| PGSC0003DMT400076932 | Potato | nucleus | 36.12 | 37.13 |
| CDX91655 | Canola | cytosol | 34.99 | 37.07 |
| Bra022596.1-P | Field mustard | plastid | 34.19 | 36.79 |
| CDY27063 | Canola | cytosol, plastid | 33.87 | 36.63 |
| Solyc03g025170.1.1 | Tomato | nucleus | 36.92 | 36.45 |
| AT5G52510.1 | Thale cress | nucleus | 36.92 | 35.94 |
| PGSC0003DMT400026240 | Potato | nucleus, plastid | 37.24 | 35.47 |
| KRH35251 | Soybean | plastid | 33.23 | 35.08 |
| KRG91573 | Soybean | plastid | 33.23 | 34.85 |
| KRH38397 | Soybean | plastid | 29.7 | 34.26 |
| KRH08880 | Soybean | plastid | 35.31 | 33.49 |
| Zm00001d038225_P001 | Maize | cytosol | 26.32 | 29.23 |
| Zm00001d021946_P001 | Maize | cytosol | 23.27 | 25.99 |
| Zm00001d006701_P001 | Maize | cytosol | 22.95 | 25.81 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 21.99 | 25.56 |
| Zm00001d030500_P001 | Maize | nucleus | 21.51 | 24.72 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 22.47 | 22.69 |
| Zm00001d030744_P001 | Maize | cytosol | 16.69 | 21.14 |
| Zm00001d007713_P001 | Maize | cytosol | 18.94 | 19.7 |
| Zm00001d048681_P001 | Maize | cytosol | 17.82 | 19.51 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 16.37 | 18.85 |
| Zm00001d048682_P001 | Maize | nucleus | 18.46 | 18.28 |
| Zm00001d048601_P001 | Maize | cytosol | 18.62 | 18.07 |
| Zm00001d034664_P001 | Maize | plastid | 16.21 | 18.07 |
| Zm00001d003553_P001 | Maize | cytosol | 17.18 | 17.63 |
| Zm00001d048602_P001 | Maize | cytosol | 18.62 | 17.42 |
| Zm00001d011070_P001 | Maize | cytosol | 17.34 | 17.22 |
| Zm00001d048588_P001 | Maize | cytosol | 17.5 | 17.19 |
| Zm00001d035671_P001 | Maize | cytosol | 16.53 | 16.45 |
| Zm00001d041536_P001 | Maize | cytosol | 18.3 | 16.06 |
| Zm00001d048604_P001 | Maize | cytosol | 18.3 | 14.9 |
| Zm00001d028603_P001 | Maize | cytosol | 17.34 | 14.71 |
| Zm00001d048600_P001 | Maize | nucleus | 15.09 | 14.57 |
| Zm00001d042907_P001 | Maize | cytosol | 18.14 | 13.97 |
| Zm00001d035670_P001 | Maize | cytosol | 15.89 | 13.64 |
| Zm00001d033166_P001 | Maize | nucleus | 15.89 | 13.52 |
| Zm00001d047813_P002 | Maize | nucleus | 17.34 | 13.03 |
| Zm00001d048603_P001 | Maize | cytosol | 18.78 | 8.22 |
Protein Annotations
| EnsemblPlants:Zm00001d026050_P001 | EnsemblPlants:Zm00001d026050_T001 | EnsemblPlantsGene:Zm00001d026050 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| ncoils:Coil | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF127 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:AQK45399.1 |
| SEG:seg | UniParc:UPI0002213D27 | UniProt:K7UKW8 | MapMan:15.5.12 | : | : |
Description
GRAS-transcription factor 22
Coordinates
chr10:+:137005720..137007591
Molecular Weight (calculated)
65307.3 Da
IEP (calculated)
6.786
GRAVY (calculated)
-0.137
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPGAPWRGP RQGYAYGVGS ATAMQMQLQE RADAAAGGGV LKRSLGELER WQHQQQHVAA QQALYLRAVR QRTAAAVDIA ALLGGIPSQV VPGSSFGGGL
101: ASPSSTLSSL TTASRAAVPL MQPQPQRQGP LMTSSPQTQA FGLSRAPLPQ PSVSSDLFIL QELEKQLLDD DDDDNEPVAA MSGTGSAVTN SEWEETIQQL
201: SSIAAAPSPG PPAAATPTNN NNNNVGMTRS PSNSSSSTAS SSASCSPPTP GAASRQLLSE AAVAIADGNH DAAASHLAAL KRAANQHGDA EQRLIAMMVA
301: ALSSRIVPAA SAPAQHLAEL CGFEQRAGSQ LLQDISPCFR VALHAASVAI VDAVGDHRAI HLVDFDVSLP QHAALIQYLA DQPVQGRSLK VTAVTDPSSP
401: FTQSLTASLP AIGERLKKLA ERAGVEYRFK VVSCRAAELD ASRLCCEPGE AVAVNLAFAL SHVPDESVSP ANPRDELLRR VRALGPQVVT LVEQELNTNT
501: APLAARFTDA CAHYGAILES LDATLGRETA EKARAEAALS RKAANAVGRD GPDRLERCEV FGKWRARFGM AGFRPVSLGS SIAEQMVAPR VGPVPPGFTV
601: KAENGVLRLC WMGRVVTVAS AWR
101: ASPSSTLSSL TTASRAAVPL MQPQPQRQGP LMTSSPQTQA FGLSRAPLPQ PSVSSDLFIL QELEKQLLDD DDDDNEPVAA MSGTGSAVTN SEWEETIQQL
201: SSIAAAPSPG PPAAATPTNN NNNNVGMTRS PSNSSSSTAS SSASCSPPTP GAASRQLLSE AAVAIADGNH DAAASHLAAL KRAANQHGDA EQRLIAMMVA
301: ALSSRIVPAA SAPAQHLAEL CGFEQRAGSQ LLQDISPCFR VALHAASVAI VDAVGDHRAI HLVDFDVSLP QHAALIQYLA DQPVQGRSLK VTAVTDPSSP
401: FTQSLTASLP AIGERLKKLA ERAGVEYRFK VVSCRAAELD ASRLCCEPGE AVAVNLAFAL SHVPDESVSP ANPRDELLRR VRALGPQVVT LVEQELNTNT
501: APLAARFTDA CAHYGAILES LDATLGRETA EKARAEAALS RKAANAVGRD GPDRLERCEV FGKWRARFGM AGFRPVSLGS SIAEQMVAPR VGPVPPGFTV
601: KAENGVLRLC WMGRVVTVAS AWR
001: MESGFSGGGG GSDFYGGGGG RSIPGGPGTV INVGNNNPQT TYRNQIPGIF FDQIGNRVAG GNGFSGKRTL ADFQAAQQHQ QQQQQQPFYS QAALNAFLSR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
101: SVKPRNYQNF QSPSPMIDLT SVNDMSLFGG SGSSQRYGLP VPRSQTQQQQ SDYGLFGGIR MGIGSGINNY PTLTGVPCIE PVQNRVHESE NMLNSLRELE
201: KQLLDDDDES GGDDDVSVIT NSNSDWIQNL VTPNPNPNPV LSFSPSSSSS SSSPSTASTT TSVCSRQTVM EIATAIAEGK TEIATEILAR VSQTPNLERN
301: SEEKLVDFMV AALRSRIASP VTELYGKEHL ISTQLLYELS PCFKLGFEAA NLAILDAADN NDGGMMIPHV IDFDIGEGGQ YVNLLRTLST RRNGKSQSQN
401: SPVVKITAVA NNVYGCLVDD GGEERLKAVG DLLSQLGDRL GISVSFNVVT SLRLGDLNRE SLGCDPDETL AVNLAFKLYR VPDESVCTEN PRDELLRRVK
501: GLKPRVVTLV EQEMNSNTAP FLGRVSESCA CYGALLESVE STVPSTNSDR AKVEEGIGRK LVNAVACEGI DRIERCEVFG KWRMRMSMAG FELMPLSEKI
601: AESMKSRGNR VHPGFTVKED NGGVCFGWMG RALTVASAWR
Arabidopsis Description
SCL8Scarecrow-like protein 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FYR7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.