Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84119 | Sorghum | cytosol, extracellular, mitochondrion, plastid | 72.83 | 62.05 |
| Zm00001d048682_P001 | Maize | nucleus | 55.64 | 47.85 |
| Zm00001d048681_P001 | Maize | cytosol | 50.09 | 47.63 |
| Zm00001d007713_P001 | Maize | cytosol | 48.98 | 44.24 |
| Os11t0706200-00 | Rice | nucleus | 45.1 | 41.15 |
| Zm00001d030744_P001 | Maize | cytosol | 37.34 | 41.06 |
| Zm00001d048600_P001 | Maize | nucleus | 40.48 | 33.95 |
| Zm00001d003553_P001 | Maize | cytosol | 37.71 | 33.61 |
| Zm00001d048588_P001 | Maize | cytosol | 39.19 | 33.44 |
| Zm00001d048601_P001 | Maize | cytosol | 39.0 | 32.87 |
| Zm00001d041536_P001 | Maize | cytosol | 42.88 | 32.68 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 26.62 | 32.07 |
| Zm00001d048604_P001 | Maize | cytosol | 45.1 | 31.9 |
| Zm00001d048602_P001 | Maize | cytosol | 39.0 | 31.68 |
| Zm00001d034664_P001 | Maize | plastid | 28.84 | 27.91 |
| Zm00001d011070_P001 | Maize | cytosol | 31.42 | 27.11 |
| Zm00001d035671_P001 | Maize | cytosol | 30.87 | 26.68 |
| Zm00001d028603_P001 | Maize | cytosol | 36.04 | 26.57 |
| Zm00001d042907_P001 | Maize | cytosol | 37.71 | 25.22 |
| Zm00001d035670_P001 | Maize | cytosol | 33.27 | 24.79 |
| Zm00001d033166_P001 | Maize | nucleus | 32.72 | 24.18 |
| Zm00001d047813_P002 | Maize | nucleus | 35.49 | 23.16 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 19.78 | 19.96 |
| Zm00001d021946_P001 | Maize | cytosol | 19.41 | 18.82 |
| Zm00001d006701_P001 | Maize | cytosol | 19.04 | 18.59 |
| Zm00001d030500_P001 | Maize | nucleus | 18.48 | 18.45 |
| Zm00001d038225_P001 | Maize | cytosol | 19.04 | 18.36 |
| Zm00001d048603_P001 | Maize | cytosol | 45.47 | 17.29 |
| Zm00001d051461_P001 | Maize | cytosol | 19.22 | 17.13 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 19.41 | 17.02 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 18.85 | 16.37 |
| Zm00001d002573_P001 | Maize | cytosol | 18.48 | 16.05 |
Protein Annotations
| EnsemblPlants:Zm00001d007248_P001 | EnsemblPlants:Zm00001d007248_T001 | EnsemblPlantsGene:Zm00001d007248 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:ONM26406.1 | SEG:seg |
| UniParc:UPI000220E059 | UniProt:A0A1D6F535 | MapMan:15.5.12 | : | : | : |
Description
GRAS-transcription factor 64
Coordinates
chr2:-:225609655..225611470
Molecular Weight (calculated)
60492.7 Da
IEP (calculated)
5.287
GRAVY (calculated)
-0.363
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSPEQFFV KDVSSTQQGG GCHHHAVPSD EDMMLPYISR MLMEDDDDAA DDNKLSHHPA LLQVEEPFAQ ILSSPSLGGI SEDVLQGGGS DGRTPDYSSS
101: SRSRCASAAG AFLELEDDVL PGDDSGFMVG RESSVLSKKR YASRDDGSLE EEVVTRRSKA DKDTCAHDML EDMMLSGHET YIRDMEKLRI AMANEKSRSN
201: GKGGGGSKKA SFCNVVDIRS LLILCAHAVA ANDGARAREL LKQINQHASE TGDATQRLAQ CFARGLEARL LGTGSQLWQL QLASDRLSTA EFLKAHNLYM
301: AACGFNMAVI GFSTMTIMQA MAMAGRRSLH IVDYGMRFGF QKKWELVCNE DLDRRPDEVL VVNDHFNFST LMDESVFFDN PSPRDTVLLN VRKMRPDVFI
401: QSILNNSNGC SYLSRFREAL FYYTAMFDIF DATMPRESRS RVVLEQGLFG RSALNVVACE GIDLLERPER YRQWQARNQR AGLRQLPLQP TIVSILKEEV
501: RSCHHRDFLI CEDGKWLLQG WMGRILFAQS TWVAEDSSYS E
101: SRSRCASAAG AFLELEDDVL PGDDSGFMVG RESSVLSKKR YASRDDGSLE EEVVTRRSKA DKDTCAHDML EDMMLSGHET YIRDMEKLRI AMANEKSRSN
201: GKGGGGSKKA SFCNVVDIRS LLILCAHAVA ANDGARAREL LKQINQHASE TGDATQRLAQ CFARGLEARL LGTGSQLWQL QLASDRLSTA EFLKAHNLYM
301: AACGFNMAVI GFSTMTIMQA MAMAGRRSLH IVDYGMRFGF QKKWELVCNE DLDRRPDEVL VVNDHFNFST LMDESVFFDN PSPRDTVLLN VRKMRPDVFI
401: QSILNNSNGC SYLSRFREAL FYYTAMFDIF DATMPRESRS RVVLEQGLFG RSALNVVACE GIDLLERPER YRQWQARNQR AGLRQLPLQP TIVSILKEEV
501: RSCHHRDFLI CEDGKWLLQG WMGRILFAQS TWVAEDSSYS E
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.