Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU83978 | Sorghum | mitochondrion | 77.27 | 76.78 |
| Zm00001d048681_P001 | Maize | cytosol | 55.96 | 61.86 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 47.85 | 55.64 |
| Zm00001d007713_P001 | Maize | cytosol | 51.19 | 53.76 |
| Os11t0706200-00 | Rice | nucleus | 45.31 | 48.06 |
| Zm00001d030744_P001 | Maize | cytosol | 33.7 | 43.09 |
| Zm00001d048588_P001 | Maize | cytosol | 39.75 | 39.43 |
| Zm00001d048601_P001 | Maize | cytosol | 39.27 | 38.47 |
| Zm00001d003553_P001 | Maize | cytosol | 36.41 | 37.73 |
| Zm00001d048604_P001 | Maize | cytosol | 45.15 | 37.12 |
| Zm00001d041536_P001 | Maize | cytosol | 41.49 | 36.76 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 26.23 | 36.75 |
| Zm00001d048602_P001 | Maize | cytosol | 38.31 | 36.19 |
| Zm00001d048600_P001 | Maize | nucleus | 36.09 | 35.19 |
| Zm00001d035671_P001 | Maize | cytosol | 31.32 | 31.47 |
| Zm00001d011070_P001 | Maize | cytosol | 30.68 | 30.78 |
| Zm00001d034664_P001 | Maize | plastid | 26.87 | 30.23 |
| Zm00001d028603_P001 | Maize | cytosol | 34.18 | 29.29 |
| Zm00001d042907_P001 | Maize | cytosol | 34.82 | 27.07 |
| Zm00001d033166_P001 | Maize | nucleus | 31.32 | 26.91 |
| Zm00001d035670_P001 | Maize | cytosol | 30.37 | 26.31 |
| Zm00001d047813_P002 | Maize | nucleus | 33.86 | 25.69 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 18.92 | 22.2 |
| Zm00001d030500_P001 | Maize | nucleus | 18.28 | 21.22 |
| Zm00001d021946_P001 | Maize | cytosol | 18.76 | 21.15 |
| Zm00001d006701_P001 | Maize | cytosol | 18.28 | 20.76 |
| Zm00001d048603_P001 | Maize | cytosol | 45.47 | 20.1 |
| Zm00001d038225_P001 | Maize | cytosol | 17.81 | 19.96 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 18.28 | 18.46 |
| Zm00001d051461_P001 | Maize | cytosol | 17.81 | 18.45 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 17.65 | 17.99 |
| Zm00001d002573_P001 | Maize | cytosol | 17.81 | 17.98 |
Protein Annotations
| MapMan:15.5.12 | ProteinID:AIB05495.1 | ProteinID:AQK48407.1 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | UniProt:K7TQL6 |
| PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | InterPro:TF_GRAS | UniParc:UPI00022138A9 |
| EnsemblPlantsGene:Zm00001d048682 | EnsemblPlants:Zm00001d048682_P001 | EnsemblPlants:Zm00001d048682_T001 | : | : | : |
Description
GRAS-transcription factor 82GRAS transcription factor [Source:UniProtKB/TrEMBL;Acc:K7TQL6]
Coordinates
chr4:-:3226716..3228605
Molecular Weight (calculated)
71513.2 Da
IEP (calculated)
6.187
GRAVY (calculated)
-0.420
Length
629 amino acids
Sequence
(BLAST)
(BLAST)
001: MATTPEEFFS KGLMEQSPPS PPVFPDLLEK PNDSSEGQHH VPNEMMLSYV SHVLMEDNDF DDKFSDHPAL LQVQQPFAQI LSSPSSGTDT GNREGCNEFL
101: HEVNVDKSML SSALSKGTDA AGTFLKGMEE ANVLLPKDNN FRRDELVNQT VRENSSHSGV KKRHSRDDHL QMEIRTRKAA MTVIEEPQEN LANETLDEMM
201: LLGYKECIRD MDKLRVTTDN NKVVKQNRNS KETRDNNVVD IRRLMISCAQ EVSVNNHSRA RELLKQIIQH ASETGDATQR LAQCFTKGLE ARLVGTGSLL
301: WELLMAERPS VVEFTKASNL YFEACCFNKV ALSFSEMTIM QAMVGKNKLH IVDYGMQFGY QWVSLFRSLA SREGALPEVK ITAIGLPKPK SYPTENIEEI
401: RCRLGRSAHE FGLPLFKFHA IKTNWEDACI EDLNLEADEV LVVNDLFSFS TLMDEGISFD DLSPRDIVLC NISKMRPHVF IQSVYNCSYG SSFLSRFREM
501: LFYYMALFDI FDATIPRESK SRMVLEQVVL GRSALNALSC EGVDLVERPE RYRQWHTRNQ RAGLRQLSLK MSTVELVRDM VKKHHHKDFL ISQDGQWLLQ
601: GWRGRVHFAH STWVAADASS RGLGSSNAE
101: HEVNVDKSML SSALSKGTDA AGTFLKGMEE ANVLLPKDNN FRRDELVNQT VRENSSHSGV KKRHSRDDHL QMEIRTRKAA MTVIEEPQEN LANETLDEMM
201: LLGYKECIRD MDKLRVTTDN NKVVKQNRNS KETRDNNVVD IRRLMISCAQ EVSVNNHSRA RELLKQIIQH ASETGDATQR LAQCFTKGLE ARLVGTGSLL
301: WELLMAERPS VVEFTKASNL YFEACCFNKV ALSFSEMTIM QAMVGKNKLH IVDYGMQFGY QWVSLFRSLA SREGALPEVK ITAIGLPKPK SYPTENIEEI
401: RCRLGRSAHE FGLPLFKFHA IKTNWEDACI EDLNLEADEV LVVNDLFSFS TLMDEGISFD DLSPRDIVLC NISKMRPHVF IQSVYNCSYG SSFLSRFREM
501: LFYYMALFDI FDATIPRESK SRMVLEQVVL GRSALNALSC EGVDLVERPE RYRQWHTRNQ RAGLRQLSLK MSTVELVRDM VKKHHHKDFL ISQDGQWLLQ
601: GWRGRVHFAH STWVAADASS RGLGSSNAE
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.