Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041536_P001 | Maize | cytosol | 92.07 | 63.8 |
| EES16206 | Sorghum | cytosol | 94.31 | 63.56 |
| TraesCS5D01G092000.1 | Wheat | cytosol | 68.5 | 54.71 |
| Os12t0573200-01 | Rice | cytosol, plasma membrane | 79.06 | 52.71 |
| TraesCS5A01G080300.1 | Wheat | cytosol | 73.78 | 48.79 |
| HORVU5Hr1G020900.1 | Barley | cytosol | 72.97 | 48.19 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 36.99 | 40.53 |
| Zm00001d048601_P001 | Maize | cytosol | 52.24 | 40.03 |
| Zm00001d034664_P001 | Maize | plastid | 44.31 | 39.0 |
| Zm00001d048588_P001 | Maize | cytosol | 50.2 | 38.96 |
| Zm00001d003553_P001 | Maize | cytosol | 46.54 | 37.73 |
| Zm00001d048604_P001 | Maize | cytosol | 58.13 | 37.39 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 41.06 | 37.34 |
| Zm00001d048600_P001 | Maize | nucleus | 47.56 | 36.28 |
| Zm00001d028603_P001 | Maize | cytosol | 53.86 | 36.1 |
| Zm00001d048681_P001 | Maize | cytosol | 41.46 | 35.85 |
| Zm00001d048602_P001 | Maize | cytosol | 46.75 | 34.53 |
| Zm00001d011070_P001 | Maize | cytosol | 43.09 | 33.81 |
| Zm00001d035671_P001 | Maize | cytosol | 42.89 | 33.71 |
| Zm00001d048682_P001 | Maize | nucleus | 43.09 | 33.7 |
| Zm00001d007713_P001 | Maize | cytosol | 40.65 | 33.39 |
| Zm00001d047813_P002 | Maize | nucleus | 54.27 | 32.21 |
| Zm00001d042907_P001 | Maize | cytosol | 52.44 | 31.89 |
| Zm00001d033166_P001 | Maize | nucleus | 47.15 | 31.69 |
| Zm00001d035670_P001 | Maize | cytosol | 41.87 | 28.37 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 25.81 | 23.69 |
| Zm00001d006701_P001 | Maize | cytosol | 25.81 | 22.92 |
| Zm00001d030500_P001 | Maize | nucleus | 25.2 | 22.88 |
| Zm00001d021946_P001 | Maize | cytosol | 25.81 | 22.76 |
| Zm00001d038225_P001 | Maize | cytosol | 25.61 | 22.46 |
| Zm00001d048603_P001 | Maize | cytosol | 59.15 | 20.45 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 25.0 | 19.94 |
| Zm00001d051461_P001 | Maize | cytosol | 22.56 | 18.29 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 21.14 | 16.69 |
| Zm00001d002573_P001 | Maize | cytosol | 20.93 | 16.53 |
Protein Annotations
| EnsemblPlants:Zm00001d030744_P001 | EnsemblPlants:Zm00001d030744_T001 | EnsemblPlantsGene:Zm00001d030744 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 | InterPro:TF_GRAS |
| PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:ONM01460.1 | SEG:seg |
| UniParc:UPI00084389D3 | UniProt:A0A1D6KE60 | MapMan:15.5.12 | : | : | : |
Description
GRAS-transcription factor 3
Coordinates
chr1:+:157566433..157567911
Molecular Weight (calculated)
55740.7 Da
IEP (calculated)
7.781
GRAVY (calculated)
-0.349
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVKEEEVIL AAPDAALGSG GVVLGRGRRN RLDDDEEDLE LQRRSSKQSA LQGDGDERDV FEKYIMTCPE TCTEQMQQLR IAMQEEAAKE AAVAAGNGKA
101: KGRRGGREVV DLRTLLVHCA QAVASDDRRS ATELLRQIKQ HASPQGDATQ RLAHCFAEGL QARLAGTGSM VYQSLMAKRT SAADILQAYQ LYMAAICFKR
201: VVFVFSNNTI YNAALGKMKI HIVDYGIHYG FQWPCFLRWI ADREGGPPEV RITGIDLPQP GFRPTQRIEE TGRRLSKYAQ QFGVPFKYQA IAASKMESIR
301: AEDLNLDPEE VLIVNCLYQF KNLMDESVVI ESPRDIVLNN IRKMRPHTFI HAIVNGSFSA PFFVTRFREA LFFYSALFDA LDTTTPRDSN QRMLIEENLF
401: GRAALNVIAC EGTDRVERPE TYKQWQVRNQ RAGLKQQPLN PDVVQVVRNK VRDLYHKDFV IDIDHHWLLQ GWKGRILYAI STWVANDAPS YF
101: KGRRGGREVV DLRTLLVHCA QAVASDDRRS ATELLRQIKQ HASPQGDATQ RLAHCFAEGL QARLAGTGSM VYQSLMAKRT SAADILQAYQ LYMAAICFKR
201: VVFVFSNNTI YNAALGKMKI HIVDYGIHYG FQWPCFLRWI ADREGGPPEV RITGIDLPQP GFRPTQRIEE TGRRLSKYAQ QFGVPFKYQA IAASKMESIR
301: AEDLNLDPEE VLIVNCLYQF KNLMDESVVI ESPRDIVLNN IRKMRPHTFI HAIVNGSFSA PFFVTRFREA LFFYSALFDA LDTTTPRDSN QRMLIEENLF
401: GRAALNVIAC EGTDRVERPE TYKQWQVRNQ RAGLKQQPLN PDVVQVVRNK VRDLYHKDFV IDIDHHWLLQ GWKGRILYAI STWVANDAPS YF
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.