Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29223 | Sorghum | cytosol | 65.62 | 58.51 |
| Zm00001d048602_P001 | Maize | cytosol | 54.26 | 51.65 |
| Zm00001d030744_P001 | Maize | cytosol | 38.96 | 50.2 |
| Zm00001d048601_P001 | Maize | cytosol | 44.64 | 44.08 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 30.76 | 43.43 |
| Zm00001d048604_P001 | Maize | cytosol | 51.73 | 42.88 |
| Zm00001d003553_P001 | Maize | cytosol | 41.01 | 42.83 |
| Zm00001d041536_P001 | Maize | cytosol | 46.53 | 41.55 |
| Zm00001d048600_P001 | Maize | nucleus | 41.64 | 40.93 |
| Zm00001d048681_P001 | Maize | cytosol | 36.44 | 40.6 |
| Zm00001d048682_P001 | Maize | nucleus | 39.43 | 39.75 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 33.44 | 39.19 |
| Zm00001d007713_P001 | Maize | cytosol | 36.59 | 38.73 |
| Zm00001d034664_P001 | Maize | plastid | 32.18 | 36.49 |
| Zm00001d035671_P001 | Maize | cytosol | 35.65 | 36.1 |
| Zm00001d011070_P001 | Maize | cytosol | 34.7 | 35.09 |
| Zm00001d028603_P001 | Maize | cytosol | 38.17 | 32.97 |
| Zm00001d042907_P001 | Maize | cytosol | 40.22 | 31.52 |
| Zm00001d035670_P001 | Maize | cytosol | 34.23 | 29.89 |
| Zm00001d033166_P001 | Maize | nucleus | 33.44 | 28.96 |
| Zm00001d047813_P002 | Maize | nucleus | 37.38 | 28.59 |
| Zm00001d021946_P001 | Maize | cytosol | 21.29 | 24.19 |
| Zm00001d006701_P001 | Maize | cytosol | 21.14 | 24.19 |
| Zm00001d048603_P001 | Maize | cytosol | 52.84 | 23.54 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 19.87 | 23.51 |
| Zm00001d038225_P001 | Maize | cytosol | 20.66 | 23.35 |
| Zm00001d030500_P001 | Maize | nucleus | 19.87 | 23.25 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 19.56 | 20.1 |
| Zm00001d051461_P001 | Maize | cytosol | 18.3 | 19.11 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 17.19 | 17.5 |
| Zm00001d002573_P001 | Maize | cytosol | 16.4 | 16.69 |
Protein Annotations
| MapMan:15.5.12 | ProteinID:AQK48227.1 | EMBL:BT067314 | UniProt:C0PG95 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 |
| PFAM:PF03514 | PFscan:PS50985 | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF41 | InterPro:TF_GRAS | UniParc:UPI000195CA5A |
| EnsemblPlantsGene:Zm00001d048588 | EnsemblPlants:Zm00001d048588_P001 | EnsemblPlants:Zm00001d048588_T001 | SEG:seg | : | : |
Description
GRAS-transcription factor 48
Coordinates
chr4:-:712461..714365
Molecular Weight (calculated)
70110.0 Da
IEP (calculated)
5.707
GRAVY (calculated)
-0.334
Length
634 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPTPEDPAA DDSEPFSPSI FLDLPPTPHP GDDGKDSMID LHFIRRLLME DDDVQFQYAD HHALLQAAEE PFAQILAGSA GSSVSGSATA DTTAIYYPDG
101: TGFHFHQQTA GPTSTTGDDG VVTMDMLNRA FLKGMEEANK FLPVVASSTH TSLLCRDYAS KHRVVDGIGM PLFFQESSGN NRRGRGCHHD DDGDDEADTR
201: SAKLIAPELE ESGEVTDGVF LRGYEVALEK MNGLSTNVPG AMSRQGQGRQ QRSSGNEAVD LRTLLVHCAE AVSTGNRPGA TELLRQIRQR SSPRGDASQR
301: LAHCFAQGLE LRLAGTGAKP KRAPAGVHLL KAYLLSMQVC CFRMVAFKSC HMAISKAVAG RKKVHIVDYG VDHGFHWLLL LGAWATRVGG PPEVRITGID
401: FPQPGFRSAT RTEGAGRRLS DFARQCGVPF KFRSIVATKW EMIFAEDLEI EPDEVLVVNG LFYFGKLMDD EGVDGDCPSP RDMVLGNISR MRPEVFVLYV
501: DNSSHNAPFF ATRFREALFY YSALFDMMDA TTPRDSDDRV LVERELLGRC ALNVITCEGS ERVERPETYR QWQVRCSRAG LRQLPLDPST VKCLSDLVKE
601: GYHKDFVIDV DQQWLLQGWK GRILYAMSTW AADR
101: TGFHFHQQTA GPTSTTGDDG VVTMDMLNRA FLKGMEEANK FLPVVASSTH TSLLCRDYAS KHRVVDGIGM PLFFQESSGN NRRGRGCHHD DDGDDEADTR
201: SAKLIAPELE ESGEVTDGVF LRGYEVALEK MNGLSTNVPG AMSRQGQGRQ QRSSGNEAVD LRTLLVHCAE AVSTGNRPGA TELLRQIRQR SSPRGDASQR
301: LAHCFAQGLE LRLAGTGAKP KRAPAGVHLL KAYLLSMQVC CFRMVAFKSC HMAISKAVAG RKKVHIVDYG VDHGFHWLLL LGAWATRVGG PPEVRITGID
401: FPQPGFRSAT RTEGAGRRLS DFARQCGVPF KFRSIVATKW EMIFAEDLEI EPDEVLVVNG LFYFGKLMDD EGVDGDCPSP RDMVLGNISR MRPEVFVLYV
501: DNSSHNAPFF ATRFREALFY YSALFDMMDA TTPRDSDDRV LVERELLGRC ALNVITCEGS ERVERPETYR QWQVRCSRAG LRQLPLDPST VKCLSDLVKE
601: GYHKDFVIDV DQQWLLQGWK GRILYAMSTW AADR
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.