Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 78.04 | 78.4 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 49.22 | 63.45 |
| Os11t0705900-01 | Rice | cytosol | 57.01 | 57.01 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 57.32 | 55.67 |
| TraesCS4D01G136300.1 | Wheat | cytosol | 58.1 | 55.34 |
| TraesCS4B01G141300.1 | Wheat | cytosol | 57.94 | 55.19 |
| HORVU4Hr1G027900.1 | Barley | cytosol | 56.7 | 54.98 |
| TraesCS4A01G176300.1 | Wheat | cytosol | 57.48 | 54.67 |
| HORVU4Hr1G027610.1 | Barley | cytosol | 57.32 | 54.36 |
| Zm00001d030744_P001 | Maize | cytosol | 40.03 | 52.24 |
| TraesCS4D01G136400.1 | Wheat | mitochondrion | 57.17 | 51.54 |
| Zm00001d003553_P001 | Maize | cytosol | 43.46 | 45.96 |
| Zm00001d048588_P001 | Maize | cytosol | 44.08 | 44.64 |
| Zm00001d048604_P001 | Maize | cytosol | 53.12 | 44.58 |
| Zm00001d048602_P001 | Maize | cytosol | 45.95 | 44.29 |
| Zm00001d041536_P001 | Maize | cytosol | 48.75 | 44.08 |
| Zm00001d048681_P001 | Maize | cytosol | 38.47 | 43.41 |
| Zm00001d048600_P001 | Maize | nucleus | 42.68 | 42.48 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 29.59 | 42.32 |
| Zm00001d007713_P001 | Maize | cytosol | 38.47 | 41.24 |
| Zm00001d034664_P001 | Maize | plastid | 34.58 | 39.71 |
| Zm00001d048682_P001 | Maize | nucleus | 38.47 | 39.27 |
| Zm00001d007248_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 32.87 | 39.0 |
| Zm00001d011070_P001 | Maize | cytosol | 34.89 | 35.73 |
| Zm00001d028603_P001 | Maize | cytosol | 40.81 | 35.69 |
| Zm00001d035671_P001 | Maize | cytosol | 34.27 | 35.14 |
| Zm00001d042907_P001 | Maize | cytosol | 39.25 | 31.15 |
| Zm00001d047813_P002 | Maize | nucleus | 40.03 | 31.0 |
| Zm00001d033166_P001 | Maize | nucleus | 34.42 | 30.19 |
| Zm00001d035670_P001 | Maize | cytosol | 32.71 | 28.93 |
| Zm00001d030500_P001 | Maize | nucleus | 20.87 | 24.72 |
| Zm00001d021946_P001 | Maize | cytosol | 21.34 | 24.55 |
| Zm00001d006701_P001 | Maize | cytosol | 21.03 | 24.37 |
| Zm00001d048603_P001 | Maize | cytosol | 53.89 | 24.31 |
| Zm00001d048199_P001 | Maize | mitochondrion, nucleus | 19.63 | 23.51 |
| Zm00001d038225_P001 | Maize | cytosol | 20.41 | 23.35 |
| Zm00001d006551_P001 | Maize | golgi, mitochondrion | 20.72 | 21.56 |
| Zm00001d051461_P001 | Maize | cytosol | 20.09 | 21.25 |
| Zm00001d026050_P001 | Maize | mitochondrion, nucleus, plastid | 18.07 | 18.62 |
| Zm00001d002573_P001 | Maize | cytosol | 17.45 | 17.98 |
Protein Annotations
| EnsemblPlants:Zm00001d048601_P001 | EnsemblPlants:Zm00001d048601_T001 | EnsemblPlantsGene:Zm00001d048601 | EntrezGene:103652665 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR005202 |
| InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 | PFAM:PF03514 | PFscan:PS50985 | ProteinID:AIB04511.1 |
| ProteinID:AQK48244.1 | SEG:seg | UniParc:UPI000221D39C | UniProt:K7U8D1 | MapMan:15.5.12 | : |
Description
GRAS-transcription factor 68GRAS transcription factor [Source:UniProtKB/TrEMBL;Acc:K7U8D1]
Coordinates
chr4:-:1045391..1047319
Molecular Weight (calculated)
71254.6 Da
IEP (calculated)
7.146
GRAVY (calculated)
-0.405
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPLPSQN LELELDLFHL HPDPPSPSVF LDLPPTPPPT YLDDDDMVLP YISRLLMEEE DAHTHSFFYQ YPDHPALLNA QQPFADILAD IAAAASPSSS
101: SVDTTDGAHG DAPLQAQADH SPNGRDADAD MATSAFLKGM QEATRFLPLP TSDATLLHNS RGRKNKHAVA RDDEPESGRA TKLMLPAHTT DDADARQMFH
201: ELMTHERDDI CMKGVQLHGT ASTQKKATRR RRRRSPAAAA DAVDLHALLL RCAQAVATDD RAAAKDLLAQ VRRHSSPTGD AAQRLAHCFA DGLEARLAGT
301: GSRLYQSLML RRTSVADFLR AYRLYMTTCC CKRVAFAFAN KTIHDAFALA GRRRRLHIVD YGLGYGFQWP GLLRGLAARE GGPPELVRIT GIDLPQPGFR
401: PAQQIEDTGR RLSDCARQLG VPFEFRGIAA KREAVSPEDL GIDPAAEVLV VISLCHFRLL TDEIEVEISS SAAAAGPSGR RRPTARDQVL CNIRRMRPDV
501: FIHGVVSGGY GTTYFPTRFR EAMFHYSAQF DLLDATVPRD SPERLLLERD IFGRAAMNVI ACEGADRVER PETYRQWQAR NRRAGLKQLQ LQADVVKVVR
601: DKVKDKYHRD FGIDEDQGWL LHTWKGRVLY GLSTWVAQHA DP
101: SVDTTDGAHG DAPLQAQADH SPNGRDADAD MATSAFLKGM QEATRFLPLP TSDATLLHNS RGRKNKHAVA RDDEPESGRA TKLMLPAHTT DDADARQMFH
201: ELMTHERDDI CMKGVQLHGT ASTQKKATRR RRRRSPAAAA DAVDLHALLL RCAQAVATDD RAAAKDLLAQ VRRHSSPTGD AAQRLAHCFA DGLEARLAGT
301: GSRLYQSLML RRTSVADFLR AYRLYMTTCC CKRVAFAFAN KTIHDAFALA GRRRRLHIVD YGLGYGFQWP GLLRGLAARE GGPPELVRIT GIDLPQPGFR
401: PAQQIEDTGR RLSDCARQLG VPFEFRGIAA KREAVSPEDL GIDPAAEVLV VISLCHFRLL TDEIEVEISS SAAAAGPSGR RRPTARDQVL CNIRRMRPDV
501: FIHGVVSGGY GTTYFPTRFR EAMFHYSAQF DLLDATVPRD SPERLLLERD IFGRAAMNVI ACEGADRVER PETYRQWQAR NRRAGLKQLQ LQADVVKVVR
601: DKVKDKYHRD FGIDEDQGWL LHTWKGRVLY GLSTWVAQHA DP
001: MGSYSAGFPG SLDWFDFPGL GNGSYLNDQP LLDIGSVPPP LDPYPQQNLA SADADFSDSV LKYISQVLME EDMEDKPCMF HDALSLQAAE KSLYEALGEK
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
101: YPVDDSDQPL TTTTSLAQLV SSPGGSSYAS STTTTSSDSQ WSFDCLENNR PSSWLQTPIP SNFIFQSTST RASSGNAVFG SSFSGDLVSN MFNDTDLALQ
201: FKKGMEEASK FLPKSSQLVI DNSVPNRLTG KKSHWREEEH LTEERSKKQS AIYVDETDEL TDMFDNILIF GEAKEQPVCI LNESFPKEPA KASTFSKSPK
301: GEKPEASGNS YTKETPDLRT MLVSCAQAVS INDRRTADEL LSRIRQHSSS YGDGTERLAH YFANSLEARL AGIGTQVYTA LSSKKTSTSD MLKAYQTYIS
401: VCPFKKIAII FANHSIMRLA SSANAKTIHI IDFGISDGFQ WPSLIHRLAW RRGSSCKLRI TGIELPQRGF RPAEGVIETG RRLAKYCQKF NIPFEYNAIA
501: QKWESIKLED LKLKEGEFVA VNSLFRFRNL LDETVAVHSP RDTVLKLIRK IKPDVFIPGI LSGSYNAPFF VTRFREVLFH YSSLFDMCDT NLTREDPMRV
601: MFEKEFYGRE IMNVVACEGT ERVERPESYK QWQARAMRAG FRQIPLEKEL VQKLKLMVES GYKPKEFDVD QDCHWLLQGW KGRIVYGSSI WVPL
Arabidopsis Description
SCL33Scarecrow-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P0C883]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.