Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G136300.1 | Wheat | cytosol | 97.33 | 97.33 |
| TraesCS4A01G176400.1 | Wheat | cytosol | 71.22 | 96.39 |
| HORVU4Hr1G027610.1 | Barley | cytosol | 94.96 | 94.53 |
| TraesCS4B01G141400.1 | Wheat | cytosol | 80.71 | 82.3 |
| Os11t0705900-01 | Rice | cytosol | 59.35 | 62.31 |
| OQU84113 | Sorghum | cytosol, nucleus, plastid | 55.64 | 58.69 |
| Zm00001d048601_P001 | Maize | cytosol | 55.19 | 57.94 |
| TraesCS4B01G141100.1 | Wheat | cytosol | 49.7 | 53.26 |
| TraesCS4B01G141200.1 | Wheat | cytosol | 42.43 | 50.44 |
| TraesCS7B01G077800.1 | Wheat | cytosol | 54.9 | 50.34 |
| TraesCS7B01G078300.1 | Wheat | cytosol | 54.45 | 49.73 |
| TraesCS4B01G336200.1 | Wheat | cytosol | 42.28 | 48.8 |
| TraesCS4B01G140800.1 | Wheat | cytosol | 42.58 | 48.56 |
| TraesCS4B01G141500.1 | Wheat | peroxisome | 58.01 | 48.45 |
| TraesCS1B01G037500.1 | Wheat | cytosol | 26.56 | 43.34 |
| GSMUA_Achr5P08320_001 | Banana | cytosol | 28.78 | 43.21 |
| TraesCS5B01G494500.1 | Wheat | cytosol | 36.5 | 37.44 |
| TraesCS5B01G138100.1 | Wheat | cytosol, plastid | 40.5 | 35.18 |
| TraesCS3B01G392600.1 | Wheat | cytosol | 39.76 | 32.88 |
| TraesCS1B01G037300.1 | Wheat | cytosol | 33.09 | 31.68 |
| TraesCS1B01G037400.1 | Wheat | cytosol | 31.31 | 29.18 |
| TraesCS3B01G080900.1 | Wheat | nucleus | 31.01 | 28.99 |
| TraesCS3B01G081000.1 | Wheat | cytosol | 31.01 | 28.71 |
| TraesCS3B01G081100.1 | Wheat | nucleus | 30.42 | 28.67 |
| TraesCS1B01G037200.1 | Wheat | nucleus | 32.05 | 28.53 |
| TraesCS2B01G217500.1 | Wheat | cytosol | 20.62 | 25.09 |
| TraesCS2B01G239400.1 | Wheat | cytosol | 19.29 | 22.81 |
| TraesCS4B01G266700.1 | Wheat | cytosol | 18.1 | 22.72 |
| TraesCS3B01G441600.1 | Wheat | cytosol | 18.4 | 22.46 |
| TraesCS2B01G413500.1 | Wheat | cytosol | 17.8 | 19.02 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G141300.1 | EnsemblPlantsGene:TraesCS4B01G141300 | InterPro:IPR005202 | InterPro:TF_GRAS | PANTHER:PTHR31636 | PANTHER:PTHR31636:SF20 |
| PFAM:PF03514 | PFscan:PS50985 | SEG:seg | MapMan:15.5.12 | : | : |
Description
No Description!
Coordinates
chr4B:-:185908992..185911016
Molecular Weight (calculated)
74981.3 Da
IEP (calculated)
5.785
GRAVY (calculated)
-0.355
Length
674 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPEEFLG QQSFLSRLEP PSPSLFLGLP PTPRGVEDGD SSFDDMALPY ISRLLEEDME DHFFYLYPNH PALLRAQLPF AQILVDVADS ASGSTSALSP
101: SSSTSTFDAT ASTTPSATSP YDAEIQISRP PYTQVLGLAS GSPDTQSSAL LSGDEEAQNP SSDFVTGNYL LPGDQDMLNM AFLKGMEEAK KFLPPNSSLP
201: AMKVDQVVGG ALAGAGLKKK RDTLEPDMGR ASKLMMPEQE EDGARELFDE MMFQEHEICM KGVQQLRIAV DSEPGKNRRK KGRPRRDSSD SEMVDLHTLL
301: LNCAQALSTD NRQTAGELLK RIKQHSTPKG DAAQRLAHYF AEALDARLAG RGSELYQSLM ARRTSVADFL KANQLYMAAC CCKKVAFIFA NKTICNAVVG
401: KSRLHIVDYG LSQGLQWPGL LRMLAAREGG PPEVKITGID LPQPGFHGAY HIEETGRRLS NFARVFGVPF KFHGIAAKRE TVQPEDLNID RDEVLVVISL
501: CHFRLLMDEN LGFDTPSPRD QVLNNIRKML PDVFIHGIMN GSYGATYFLT RFREALFNYS AQFDLLDATV PRDNEGRLLL ERDIFGRSAL NVIACEGADR
601: VERPETYKQW QLRNHRAGLT QLPLNPDVVR LVLDKVKDNY HKDFVVDDDQ RWLLHRWKGR VLYALSTWVA DNAT
101: SSSTSTFDAT ASTTPSATSP YDAEIQISRP PYTQVLGLAS GSPDTQSSAL LSGDEEAQNP SSDFVTGNYL LPGDQDMLNM AFLKGMEEAK KFLPPNSSLP
201: AMKVDQVVGG ALAGAGLKKK RDTLEPDMGR ASKLMMPEQE EDGARELFDE MMFQEHEICM KGVQQLRIAV DSEPGKNRRK KGRPRRDSSD SEMVDLHTLL
301: LNCAQALSTD NRQTAGELLK RIKQHSTPKG DAAQRLAHYF AEALDARLAG RGSELYQSLM ARRTSVADFL KANQLYMAAC CCKKVAFIFA NKTICNAVVG
401: KSRLHIVDYG LSQGLQWPGL LRMLAAREGG PPEVKITGID LPQPGFHGAY HIEETGRRLS NFARVFGVPF KFHGIAAKRE TVQPEDLNID RDEVLVVISL
501: CHFRLLMDEN LGFDTPSPRD QVLNNIRKML PDVFIHGIMN GSYGATYFLT RFREALFNYS AQFDLLDATV PRDNEGRLLL ERDIFGRSAL NVIACEGADR
601: VERPETYKQW QLRNHRAGLT QLPLNPDVVR LVLDKVKDNY HKDFVVDDDQ RWLLHRWKGR VLYALSTWVA DNAT
001: MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
101: EKPCMFHDAL ALQAAEKSLY EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR PSWLHTPMPS NFVFQSTSRS
201: NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL
301: TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC
401: AQAVSVDDRR TANEMLRQIR EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK KAAIIFANHS MMRFTANANT
501: IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR
601: FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP
701: ETYKQWQARL IRAGFRQLPL EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS
Arabidopsis Description
SCL14SCL14 [Source:UniProtKB/TrEMBL;Acc:A0A178WH17]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.